Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06092 LG1 90477238 90480772 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   gene silencing by RNA, protein phosphorylation, meristem development, seed development, cellular protein modification process, protein phosphorylation, seed development, protein phosphorylation, seed development, seed development, gene silencing by RNA
Cellular Component   located in   chloroplast, plasma membrane
Molecular Function   enables   protein kinase activity, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
T/A 90477335 3_prime_UTR_variant
A/G 90477528 3_prime_UTR_variant
C/A 90477582 3_prime_UTR_variant
T/C 90477589 3_prime_UTR_variant
G/A 90477872 synonymous_variant p.Asp583Asp
G/A 90477881 synonymous_variant p.Gly580Gly
C/A 90477882 missense_variant p.Gly580Val
T/C 90477893 synonymous_variant p.Arg576Arg
T/C 90477901 missense_variant p.Thr574Ala
C/A 90477905 synonymous_variant p.Val572Val
C/T 90477925 missense_variant p.Ala566Thr
A/G 90477932 synonymous_variant p.Leu563Leu
A/G 90477935 synonymous_variant p.Phe562Phe
T/A 90477941 missense_variant p.Gln560His
T/C 90477944 synonymous_variant p.Gln559Gln
G/T 90477946 missense_variant p.Gln559Lys
G/A 90477953 synonymous_variant p.His556His
G/T 90477962 synonymous_variant p.Thr553Thr
T/C 90477974 synonymous_variant p.Leu549Leu
G/A 90477976 synonymous_variant p.Leu549Leu
A/C 90477980 synonymous_variant p.Leu547Leu
G/A 90477982 missense_variant p.Leu547Phe
T/A 90477986 synonymous_variant p.Gly545Gly
A/T 90478006 missense_variant p.Ser539Thr
C/A 90478677 intron_variant
A/T 90478822 intron_variant
C/T 90478832 intron_variant
C/T 90479003 intron_variant
C/A 90479106 intron_variant
C/T 90479107 intron_variant
G/A 90479288 missense_variant p.Pro437Leu
C/A 90479290 missense_variant p.Gln436His
A/T 90479296 missense_variant p.Asp434Glu
G/T 90479358 missense_variant p.Pro414Thr
T/G 90479423 missense_variant p.Lys392Thr
G/A 90479959 synonymous_variant p.Ala213Ala
C/T 90479961 missense_variant p.Ala213Thr
G/T 90480056 missense_variant p.Pro181His
G/T 90480140 missense_variant p.Ser153Tyr
G/T 90480177 missense_variant p.Arg141Ser
T/C 90480759 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06092.1
MQRATAALLPLLLHIISLATTCGGSTVSSDAVWLLSFKREADQDNRLLYTLNEPYDYCEWEGVKCAQGRVVRFVVQSMGLRGPFPPDTLTKLDQLRVMSLRNNSLYGPIPDLSSLTNLKALFLDHNNFSGSFPPSLLLLHRILTLSLSHNNLSGSIPVRLTLLDRLIALRLDSNNFSGTLPPLNQTALKLLNVSNNNLTGPVPVTPTLSKLNAASFSGNPGLCGEIVHRECGSRSRFFGPATSTSTAPLSQSEQSQGILVVPASAQTKRHRKTGLLVVGFVVAGVLVSVFVVSVVSLVRRRQAAAGKAVVAEGGEVEGVVEEEEREVKVRRMEEAHRSGKLVFCCGEVQQYTLEMLMRASAELLGRGSVGTTYKAVLDSRLIVTVKRLDGGKSGGSDGVVFERHMEAVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSIFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSTLIHGNLKSSNVLLGTGFEACITDYCLSLFADSSFTEDPDSAAYRAPEARNSSGRATSKSDVYAFGVLLLELLTGKHPSQQPFLAPADLQDWVRTMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDNSFTGLS*


CDS Sequence:
>Vu_06092.1
ATGCAAAGGGCAACGGCAGCACTCCTCCCTCTGTTGCTACATATAATCAGCCTCGCCACCACTTGCGGTGGCTCCACGGTGTCCTCCGACGCGGTGTGGTTGCTGTCGTTTAAACGGGAAGCGGACCAAGACAACAGGCTCCTCTACACTCTGAACGAGCCGTACGACTACTGCGAGTGGGAGGGCGTGAAGTGTGCACAAGGGAGAGTGGTCCGTTTCGTGGTCCAGTCCATGGGCCTGCGCGGCCCATTCCCTCCGGACACCCTGACGAAGCTGGACCAGCTCCGCGTGATGAGCCTCCGTAACAACTCCCTCTACGGGCCCATCCCTGATCTCTCCTCTCTCACCAACCTCAAGGCTCTCTTCCTCGACCACAACAACTTCTCCGGTTCCTTCCCTCCTTCCCTCCTCCTCCTCCACCGCATCCTCACTCTCTCCCTCTCTCACAACAATCTCTCCGGTTCAATCCCGGTTCGGCTCACTCTCCTCGACCGTCTCATAGCCCTCCGTCTCGACTCCAACAACTTCTCCGGCACGCTCCCTCCTCTCAACCAAACCGCTCTCAAACTGCTCAATGTCTCCAACAACAACCTGACCGGTCCTGTTCCCGTTACTCCGACCCTCTCTAAACTCAACGCCGCCTCCTTTTCGGGAAACCCTGGCCTCTGCGGGGAGATTGTTCACCGAGAGTGTGGCTCGCGCTCCCGCTTCTTCGGCCCCGCCACGTCCACCTCCACGGCGCCGTTGAGTCAGAGCGAACAGTCTCAGGGTATTTTGGTTGTGCCTGCTTCCGCCCAAACAAAGCGTCATCGAAAGACTGGGCTGCTGGTTGTGGGCTTTGTTGTGGCGGGTGTTCTTGTGAGTGTTTTTGTTGTGTCTGTGGTTTCGCTTGTGAGGAGGAGGCAGGCGGCGGCGGGGAAAGCGGTTGTTGCGGAGGGGGGTGAGGTGGAGGGGGTTGTGGAGGAGGAGGAGAGGGAGGTGAAGGTGAGGAGGATGGAGGAGGCGCACAGGAGTGGGAAACTTGTGTTCTGCTGCGGGGAGGTGCAGCAGTATACGCTGGAGATGCTGATGCGGGCTTCGGCGGAGTTGCTGGGGAGGGGGAGCGTGGGGACGACGTACAAGGCGGTGCTGGATTCGCGGTTGATTGTGACGGTGAAGAGGTTGGATGGGGGGAAGAGTGGGGGGAGTGATGGAGTAGTGTTTGAGCGCCACATGGAGGCTGTGGGGAGGCTTCGCCACCCCAATTTGGTTCCTTTGAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTCATATATGATTATCAGCCCAATGGCAGCATCTTCAACCTCGTTCACGGTTCAAGATCGGCGAGGGCGAAGCCTTTGCATTGGACATCATGCTTGAAAATAGCCGAAGATGTGGCACACGGACTTGCTTATATACATCAAGTTTCAACTCTAATTCATGGCAACCTGAAATCTTCTAACGTTCTTCTTGGGACGGGCTTTGAAGCCTGTATTACGGACTATTGTTTGTCCCTCTTTGCAGATTCTTCGTTCACTGAAGATCCCGATTCTGCGGCTTATAGAGCACCCGAGGCTCGCAACTCTAGCGGCAGAGCCACATCCAAGTCTGATGTTTATGCTTTTGGAGTGCTTCTACTAGAGCTTTTGACCGGTAAACACCCTTCCCAACAACCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAACAATGAGAGATGATGATGGCAGTGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGCGTTTCGATGGAGGATAATTCATTTACCGGGCTCTCTTAG


Promoter Sequence:
>Vu_06092::LG1:90480772-90482772(-)
AGAAACGACCTATAGTTTAGGGACTAAAAACATATTTAACCCTAAAATAAAATAAAAACTTAAATTATTTATATTAAAATCTTTTAATATTAAAATAATCAAATCTTTATTTTTAACTATTAGTATTTTTAAAATATTATTTTCTAATCTTTACACGTTACTTTTCTATAAAAAGAATTAGTTAAGAAAATACATTTTCAATACGTAATATTTTTTAAAACATACTCATAAGTAAATTGAGAAAATAATTGCACCATTTTGCCTCTAACCTCTCACGTTCAAAAGGTCACGTTAGGCCGTCCATTCCAAAAATCCGAAAGCTTCTCGTAAAAGATTCCTTTTTATTTATTTGTTTACTTTTATTATTAAAAATTTATTACGAAAGTGACAAATTTGAATATATATATATATATATATATATATATAATACTTTTTTAATACCGAATTTTGATTGATTGAACATATTGTTAGGCATGTTATATTTAGACTTAGAGTGGGGATTAAAAGAAATAAAATTCTTTAGCACTCGGCTCATGCAGCTGCTCTATTTATAAGTTAACTTACGTAAGTTAATTACAATAGTTTTTTTCCAGTAAAATATTCAGTTTTTAAATATTTGGCTAAGGCTTGTTTTGCCTTCTTAGAATTTTATTATTTTATTCTTTTTAAAATTACTCAATTTTAATTTCTTTTTAATTTTTTATTCAAATAAATAATTTTATTTCAAAAAACTTAAATTTCTCTAAATGAATAAATTATTCTTTTAAATTGTCTGAAATTTTACAAATTGAATATTTAGTTCGTCTTTTTTTGTATCTTCAAACATTTTGACAAGTACAAATTATAAAACTATGTATTCACATGATAATTAGTATATCTCTTAGTTTTAGGAATAACAGGTCTTTGCTATGAAATTTATAATATGTTTCGCTTTCTAACTATATTTTTTTTACTTTAACTAGAACTCAAAATTTTATTCAATACTAATTGTATGTTTATTTTAAAGTATTGGATTATTTTAGAAATTCTGTTTGTATTTATTTATGATTTAAAAAATGGAAGATCTCACATTAATTACATTCTTATATATTTTTTAATTCTTAAATAATTCAATTTTGTAGGTGAAGAGAGAAAAATAAATAAAAACTATATAATTATTTTATTATAATTGACAAAATAATAAAATTTAGTATATATGATTAACTTACTACAGAAGCAATCTAAAAAAAGAAAACAGATTAAATACAATAAAACAGTGAGTATATATAACTTTAGTTTCAGTTAAATAAGTAACATATAAGATATCTTATTTATAATTTCTTATGAAGGCAATATTCTAATAGAGTTGGTTAATGAAATGCTACAAATGTTGCAGTTTGCGCGACAGAACATTTAACATGTGTAAAAATTCCTTAGGGACCATGACCAACCACGCCATGCAACATTCTAAAATTCATATATCTATATGTAAGGAGATGGTGAGAAGCTAAAAACAAACTTTGTTTAGGAAACAAATAGTAGCATTACGTATTTCATGTTTAGGTGAGATAGATTTTTTATGTAATAAACTTTGAGTAATGAATAATTATTAGACAAATGGTTTCATATGACTACTAGTAAGCATTTTGTATGATATAATAAAGGAAATGAGATGAGATTGGAAAGGATATTGATACTTTCAAGATATTTTTATCTACATTTAATTTTAGTTCAAAATTATTCTAAAATCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAACACATTATAACGTAGTAATCATACACAAATAATACTAAAATATTGTAAAAAAAATGTTATGAAAGTATTATCAATTGGAAATTGGGTGTTGTAGAAGAAAATGTAGACATGAAACGAGGAAAAGGAGATGAGCATCGACAAAAAGAGAGAGAAAGAAAGGGAGTTTATATTATTAGGAAAAAAAAGGAAAAGTGTT


Gene Sequence:
>Vu_06092(-)
GGGAAGGGGCATAAGAAAAGATTATGTAATAATTTGGAGCATTCCCCACTTTCACGTGAGTGGAGTAGGACTTGAAATCCAGCTGCTTCCCACTACTACTGTTAGCGGATATACTCACTCTTTCAACAACAAATGTCTGAAAGCTGAACAACCGAAGAAACAGAAAGCTCAAACAATGCAAAGGGCAACGGCAGCACTCCTCCCTCTGTTGCTACATATAATCAGCCTCGCCACCACTTGCGGTGGCTCCACGGTGTCCTCCGACGCGGTGTGGTTGCTGTCGTTTAAACGGGAAGCGGACCAAGACAACAGGCTCCTCTACACTCTGAACGAGCCGTACGACTACTGCGAGTGGGAGGGCGTGAAGTGTGCACAAGGGAGAGTGGTCCGTTTCGTGGTCCAGTCCATGGGCCTGCGCGGCCCATTCCCTCCGGACACCCTGACGAAGCTGGACCAGCTCCGCGTGATGAGCCTCCGTAACAACTCCCTCTACGGGCCCATCCCTGATCTCTCCTCTCTCACCAACCTCAAGGCTCTCTTCCTCGACCACAACAACTTCTCCGGTTCCTTCCCTCCTTCCCTCCTCCTCCTCCACCGCATCCTCACTCTCTCCCTCTCTCACAACAATCTCTCCGGTTCAATCCCGGTTCGGCTCACTCTCCTCGACCGTCTCATAGCCCTCCGTCTCGACTCCAACAACTTCTCCGGCACGCTCCCTCCTCTCAACCAAACCGCTCTCAAACTGCTCAATGTCTCCAACAACAACCTGACCGGTCCTGTTCCCGTTACTCCGACCCTCTCTAAACTCAACGCCGCCTCCTTTTCGGGAAACCCTGGCCTCTGCGGGGAGATTGTTCACCGAGAGTGTGGCTCGCGCTCCCGCTTCTTCGGCCCCGCCACGTCCACCTCCACGGCGCCGTTGAGTCAGAGCGAACAGTCTCAGGGTATTTTGGTTGTGCCTGCTTCCGCCCAAACAAAGCGTCATCGAAAGACTGGGCTGCTGGTTGTGGGCTTTGTTGTGGCGGGTGTTCTTGTGAGTGTTTTTGTTGTGTCTGTGGTTTCGCTTGTGAGGAGGAGGCAGGCGGCGGCGGGGAAAGCGGTTGTTGCGGAGGGGGGTGAGGTGGAGGGGGTTGTGGAGGAGGAGGAGAGGGAGGTGAAGGTGAGGAGGATGGAGGAGGCGCACAGGAGTGGGAAACTTGTGTTCTGCTGCGGGGAGGTGCAGCAGTATACGCTGGAGATGCTGATGCGGGCTTCGGCGGAGTTGCTGGGGAGGGGGAGCGTGGGGACGACGTACAAGGCGGTGCTGGATTCGCGGTTGATTGTGACGGTGAAGAGGTTGGATGGGGGGAAGAGTGGGGGGAGTGATGGAGTAGTGTTTGAGCGCCACATGGAGGCTGTGGGGAGGCTTCGCCACCCCAATTTGGTTCCTTTGAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTCATATATGATTATCAGCCCAATGGCAGCATCTTCAACCTCGTTCACGGTAGTCACTTTACATTTATTAACATCAATTATGAATTCAACTGCACTGTTTAGTTGGTCCCTGTTTGTATAAATTTTTCTTTCGAGTAAAAATAGTTTGAAATGAACCAAATTTCTTTTCGTAATAACTTCATGCAATTTTCTTACTCTTGGGATAGAATTTTGTTTTCAAAAGTTTCAATGCCTAAGGTGATTTTAATTTTCACAAGTTCGAATTTTTATCCCTTTAACTCATTGTAAATGCTCAGTTCTTCACGTATTGTTATTGCCGGTTACATTAAACTTTTCCGTTTTTCTGCTCTGTAAACAAGTTTTGGAACTCTGGTTACTGTTTCGTCATATTTCGGGAAAGTATAGATAAGTGTGACTATGCGCGAACAGTCGCATCTTCTGTACTAAAGAATCTAAAAACATTGCCATTGCAGTCGAAATGGCAATGATGTGCCATTTTCAAAACCTTCGTTCTAATGTCAAAATTGGGTTTTGGAGTTGAAGTTTCGAAGAAGACTGAGGATAAATGTTGTGGGGGATGGTGGTTCGATTAGAGTTTGATTTGATGGATGATGTGTTGTTCTGCAAAGGGTTGTGGTATGTGGAATGGTACGTTTTGTCAGATAGGTCTGTATTGTGTGTTGCCTTTTTCTTATTGTTTTTTTACGCGAGTTTTCCATACGAGAGCACTGGCTTTCGTAGTTTGGTGGCCGATGTCGACAGTCACGGGGCTGGATTGTTTTTGTTTCTGTTTGGATTATTTTATTTTTGGTTGGGATGTGTGATTTGTGATATGTTTGCACTATTTCAATGCCAGGTTGACTGCAGTGCTTCATACGGTTGACCTTTTGTTGAGGCAAAAGCACTTTTATTTCAAAATTTCCAATTTTAATTGCTATTCAGTGTCAGAAGTCTTAATGTAGCCTGTTGTTGTGGGGACCAATCTGATTCTGTTTTTCTTAATTAAGATAGGTGCTGCATGTGCAGGTTCAAGATCGGCGAGGGCGAAGCCTTTGCATTGGACATCATGCTTGAAAATAGCCGAAGATGTGGCACACGGACTTGCTTATATACATCAAGTTTCAACTCTAATTCATGGCAACCTGAAATCTTCTAACGTTCTTCTTGGGACGGGCTTTGAAGCCTGTATTACGGACTATTGTTTGTCCCTCTTTGCAGATTCTTCGTTCACTGAAGATCCCGATTCTGCGGCTTATAGAGCACCCGAGGCTCGCAACTCTAGCGGCAGAGCCACATCCAAGTCTGATGTTTATGCTTTTGGAGTGCTTCTACTAGAGCTTTTGACCGGTAAACACCCTTCCCAACAACCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAACAATGAGAGATGATGATGGCAGTGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGCGTTTCGATGGAGGATAATTCATTTACCGGGCTCTCTTAGTTTCTGAACTATATCTATCTAAACCTGACTGGATTGTGTGCGGAGAAGTTAATCACACCTTGTCCTCATCTTGAAAATGAAAGAAATTTCTCGTGGACGGACTTAGACGAGTGATTTTGCAAGCCAGGTTAAAAAGCAAGCACTCATTTTTGCCGAAATCTCTATACAGTGAAAAAAGCAGAAGCATCGGATGTTCTGTTATCTGCCGGGGCTGGTTTGTGCATTTTTTTAGTTCTATAGACACAGTGACATAGAATTTTAATGAATTTGAGCTTATTGAAATTTTCTTCGTTTCTCTGACAACCAAGGGACGTTGGCAGTAGAAAAAAAAAACTGAAAAAGGTTTAATGGAGACTTGACTGGTAGGGATGTTTGAAGGAAAGCTTAAAATACCTTTAATCTTAGCACAGTAGTACTTTTTGTTGTTTATGTGTATATTGAATATATATTTGAAAATCAAAAAATTACTTTTAAATTTTTTACC