Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06147 LG1 91278333 91279546 PREDICTED: LOB domain-containing protein 37
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, response to hypoxia, response to fungus, response to bacterium, response to bacterium, response to fungus, chemical homeostasis, response to hypoxia, immune system process, defense response, regulation of gene expression, defense response to fungus, response to oxidative stress, defense response to fungus, response to organic cyclic compound, cellular metal ion homeostasis, response to nitrogen compound, response to wounding
Cellular Component   located in   mitochondrion
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
T/A 91278348 3_prime_UTR_variant
C/T 91278457 3_prime_UTR_variant
A/T 91278550 3_prime_UTR_variant
G/A 91278726 missense_variant p.Thr204Ile
G/A 91278825 missense_variant p.Ala171Val
A/T 91278940 missense_variant p.Trp133Arg
G/A 91278978 missense_variant p.Ala120Val
C/T 91279019 synonymous_variant p.Thr106Thr
C/T 91279029 missense_variant p.Arg103His
G/A 91279031 synonymous_variant p.Leu102Leu
C/G 91279165 downstream_gene_variant
G/C 91279187 downstream_gene_variant
A/G 91279227 splice_region_variant&intron_variant
T/C 91279296 missense_variant p.Lys41Glu
C/T 91279302 missense_variant p.Val39Ile
G/A 91279303 synonymous_variant p.Phe38Phe
A/C,G 91279304 missense_variant p.Phe38Cys
C/T 91279308 missense_variant p.Val37Ile
T/A 91279316 missense_variant p.His34Leu
T/C 91279328 missense_variant p.Glu30Gly
C/T 91279338 missense_variant p.Glu27Lys
C/A 91279352 missense_variant p.Cys22Phe

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06147.1
MSCNGCRVLRKGCSESCVLRPCLQWIETSEAQGHATVFVAKFFGRADLMSFISNVPENQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPMPELMGLASPAADETSEVACSDIWRIRDPNPTCGFTNTRSHTRVSSASKRKRLEEPAKLQAAPNLDLRLTPIFLQKKVENRRPVSPSMTSEESGTTTACLESKFGDQWGHSGDRKVLNLFI*


CDS Sequence:
>Vu_06147.1
ATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAGGGATGTAGCGAATCCTGTGTGTTGCGTCCTTGTTTGCAGTGGATCGAAACCTCCGAAGCTCAAGGCCATGCCACCGTCTTCGTTGCCAAATTCTTTGGCCGCGCTGACCTCATGTCCTTCATTTCCAACGTTCCAGAAAATCAAAGACCTGCTCTGTTTCAGTCCTTGCTGTTCGAAGCATGCGGGAGAACGGTCAACCCCGTCAACGGTGCCGTGGGCCTTCTCTGGACCGGAAACTGGCACGTCTGCCAGGCGGCCGTCGAGACCGTGCTCCGCGGGGGTACGCTCAGGCCCATGCCGGAGCTCATGGGACTCGCCTCTCCCGCTGCCGACGAGACATCGGAAGTTGCATGCTCCGACATTTGGAGAATCCGAGACCCGAACCCGACTTGTGGCTTCACGAACACCAGATCCCATACCAGAGTCTCCTCCGCCAGCAAACGCAAGCGGTTGGAGGAGCCGGCGAAGCTTCAAGCGGCGCCGAATCTCGATCTCCGACTGACGCCTATTTTCCTGCAGAAGAAGGTTGAAAACCGGCGGCCGGTGTCGCCCTCGATGACCTCCGAGGAGTCAGGCACCACGACGGCGTGCTTGGAGAGCAAATTCGGGGATCAGTGGGGTCACAGTGGAGACCGGAAAGTTCTCAACCTTTTCATTTGA


Promoter Sequence:
>Vu_06147::LG1:91279546-91281546(-)
CTGAATGTGCATGTTCAAGTTCTACTATTAATTTGAATTTTGTTTGCAGCGTTCAATGTTGTTTTGCTTTTGTTGTTTTGCTGTTTTGCTTTTGTTGTGAATATAAAATAAGAATATAATAAAAATAATATAAAAATAATAATAATAAGAAGAATATAATAAAAATAATAATAATAATAATAATACTTTGCAATTTTAAATAACAATTTCAATTTCATTTTAATATAATATTCATTATTTATATTTAAATTTATTATATCATATTTATCATCAAGATAAAATGATAATTATTTAATTTTGTCTATAAAACATATTTTTTAAGTTATTATGCTTAAATCACTAACTTTTGTTATAAAATTAAATCACTAACAAAATTGGTAGAAGAGAGAGAAGAAGAATAGTAGAAGAGAGAAAAAAAACTGTTGCGTTGCACAGAAAAAGGAGAAAAAGTAGAAGAGAGAGAAAAATAATTAACGCCGTTTTACGGATTTATCGGAAGGGATTTCATTGATATAAATTTTATTAAGTAAGGACGTAATTGACGCACTTTTTAAAGGACGAACTAATTTGACATTTTCGAGCGAAACTGGGGACAAAATAGGGTATTAAGCCTTTTTATAATATGTAAAATATATAGGGTTAAATATGTATTTGGTCCCTTAACTTTCAGCGAAAATTAGAATTAGTCCCTCTTCAAAACAACTTTGGACTAATTTAGTCCCCAAACTTTAGAAATGCGTGAATGTGAATTTAGTCCTTTTAACCAAATTTTATTAACTTTATTTGATGTTTCAAACGCATTTCTTAGTGAGCATTGAAGCAAAAATGTGTCAAACTGTGTAAACAACTAAAATGCTATCATGAAACGCACTTAAAACATCAAATAAACCTAACAAAATTTAGTCAAAAGGACTAAATTCACACATTTCTAAAGTTTGGGAACTAAATTAGGCCAAAGTTTTAAAGAGGGTCTAATTCCAATTTTCGCTGAAAGTTAAGGGACTAAAAACATATTTAACCCAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGGGTTTGCTAACGCACACGCTTTTTTTCAGTTGGTACATTTTAGCAATGTGTACTGGGTTTAGTAGACAAAAATACCTCATATATTATGAATTCAAAGTTTAAGGTCAAGGGTATTTGAATAATTTTCTTTCTCAAAACTAAAAAAAAAAACAAGAAACCTCCAAACTCACTCTTACTCATCTCTGTCGTTCCTCTCAAACCTTTCTTTCGCTGAATGTAAGTCGCCCAAATCGCGAACTCTAGAGACAAAAATAGCCTTCGAATGGGGCCACTGACGACGAAACTTGTTGAACGTCGACGAAGATTGTTGAACAGTTCGACAGAGATTGTTGAACAGGTCGAGAGAGAGATTCTTGAACGGGTCAAGAGAGATTCTTGAACGGGTCGAGAGAAATTCTTCAATGGATCCGGAGAAAACTTCCCAAAATAAAGAGTAAGAATTTCAAACGAAGAATGAAAACCCTAAATTGGAGAAAGGGAATAATGCTGAATGAAGAAGGGTATTTTCAGGATATTCAAAAATGAAGTCTGGTCCCTTTTCATAAACAAATTTTTTAAAAAGGAAATAATTAAAATGACTCAATAAGACGTGTCAAATTTTTGTAAAATTCCGTTGTTAAAATATCCTATGAATTAATATCCGGAGGTGAAATATATAAAATCGAACGGCGTAGGAAACATCCATGCGCGGAAACACGGAGCCGCGCACCCCAAAGACGTTGGAATCTCACCTTTGGAAACAGAAAACAGAATTAAAAACAACAAAACACACGCACTCTCTTCATACTTCTCTTCCACTTCCACCACTACCTTAACCCAACCATAGTTAACCACCAACCCCACTTCCCCCAACATCTCTCTGTCTCTTTCCCATTTCCTTCCTTATTTATATCTCTTCCCAACCTACATTTTCATT


Gene Sequence:
>Vu_06147(-)
CTCTGATCTCTTCTCCCTCTATTCTTCATAATTGCTGTTCGTGTTGATGTGAGGCTGATTTCACAACAAACTGTTGTTTCAAACACAAACATAGTCGCTGTTGGGTTCGTTTGTTTGTAGCAAAATAGGCATGAGTTGCAACGGTTGCCGAGTTCTTCGAAAGGGATGTAGCGAATCCTGTGTGTTGCGTCCTTGTTTGCAGTGGATCGAAACCTCCGAAGCTCAAGGCCATGCCACCGTCTTCGTTGCCAAATTCTTTGGCCGCGCTGACCTCATGTCCTTCATTTCCAACGTTCCAGAAAATCAAAGACCTGGTAAATATTTTTTTTTTTTTACTCTCTCTCTACAGTATTCCTAGCCCTACCTTATACCCCTGTGCGTGTTCCCTATGCAGCTCTGTTTCAGTCCTTGCTGTTCGAAGCATGCGGGAGAACGGTCAACCCCGTCAACGGTGCCGTGGGCCTTCTCTGGACCGGAAACTGGCACGTCTGCCAGGCGGCCGTCGAGACCGTGCTCCGCGGGGGTACGCTCAGGCCCATGCCGGAGCTCATGGGACTCGCCTCTCCCGCTGCCGACGAGACATCGGAAGTTGCATGCTCCGACATTTGGAGAATCCGAGACCCGAACCCGACTTGTGGCTTCACGAACACCAGATCCCATACCAGAGTCTCCTCCGCCAGCAAACGCAAGCGGTTGGAGGAGCCGGCGAAGCTTCAAGCGGCGCCGAATCTCGATCTCCGACTGACGCCTATTTTCCTGCAGAAGAAGGTTGAAAACCGGCGGCCGGTGTCGCCCTCGATGACCTCCGAGGAGTCAGGCACCACGACGGCGTGCTTGGAGAGCAAATTCGGGGATCAGTGGGGTCACAGTGGAGACCGGAAAGTTCTCAACCTTTTCATTTGAGGACTCTCCCCATCTCTCTCTGTGAGGAGCTTTGTGTTTTTCTGAATCTAATTAACGAGTTTGTTGTATGGTGTAATAGTCCTCGAAGGGTTCTTCCCGGTATTTAAGTCCGGCGAGTTTTGGTGAGACACCGGCACAGGATTTCTTTGGAGAGAAAAATGAGGGTTCGTCGGTGATCCCTTCTTTGTTTTTGTTTGCTTTTTTTTAATCCCTGCCAAACATGGAATATGTAAACAGTCCTCTGATCGTGGGACACGAATATTAGTAATATTAAATATGAATAAATGAGTACATAAACATCTTTTGCTTTT