Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06227 LG1 92367032 92368189 PREDICTED: protein LOL1 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of removal of superoxide radicals, defense response to other organism, regulation of removal of superoxide radicals, regulation of removal of superoxide radicals, regulation of removal of superoxide radicals, positive regulation of programmed cell death, positive regulation of plant-type hypersensitive response, positive regulation of plant-type hypersensitive response, defense response to other organism, positive regulation of plant-type hypersensitive response, positive regulation of programmed cell death, positive regulation of plant-type hypersensitive response, positive regulation of plant-type hypersensitive response, defense response to other organism
Cellular Component   located in   extracellular region
Molecular Function   enables   DNA binding
SNP Position Effect Amino acid change
A/G 92367436 intron_variant
G/C 92367518 intron_variant
G/C 92367520 intron_variant
T/G 92367523 intron_variant
G/A 92367536 splice_region_variant&intron_variant
A/T 92367628 missense_variant p.Trp29Arg
G/T 92367762 intron_variant
A/C 92367890 intron_variant
T/C 92367895 intron_variant
C/A 92367898 intron_variant
A/G 92367990 intron_variant
T/C 92367997 intron_variant
A/T 92368000 intron_variant
G/C 92368016 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06227.1
MPVPLAPYPAPPAPYTPPANGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATNVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGA


CDS Sequence:
>Vu_06227.1
ATGCCAGTTCCACTTGCTCCCTACCCTGCACCACCAGCTCCTTATACACCACCAGCTAATGGTGCACAGAGTCAACTAGTCTGTTCTGGATGTAGAAACCTTCTCATGTATCCAGTTGGAGCCACCTCGGTGTGCTGTGCTGTTTGCAATGCAGTCACAGCAGTGCCACCTCCTGGCACAGAAATGGCCCAGTTAGTTTGCGGAGGTTGCCATACTCTACTCATGTACATCCGAGGAGCGACAAATGTGCAATGTTCTTGTTGTCACACGGTCAATCTAGCGTTGGAAGCAAATCAGGTGGCACATGTCAACTGTGGGAACTGCAGGATGCTACTCATGTACCAATATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAATTTTGTAACATCAGTTGGGGCCA


Promoter Sequence:
>Vu_06227::LG1:92368189-92370189(-)
ATCATTTACGATAATAATAGAGGTACTGCTAAGTTGGATGGGAGTTGATGATTAAATAAATCTTTAAGTTATAAATTATTTTATGTATACAAAATTTAAGTTTACTTATAATTTAGAATTTTAAAATAATAAATTTGTGGATGTTTTTGGATACATATTAATTACTTCACTCATCTATTTAATATAAACTTACAAATGACAAATTTGTTAGAAATAAGTATGAGAGTAAGTCTCAGGATAGAAATGAGAAAGTAAAGCAATATATAAAGGTGAAAGACATGTTAACTCATTTGTCTTAAGGTTCTTGATAGAGAATGATATAAATCCTTTACATGATTGGATTCACTTGACATTAACATTTGTGTCTCCTCGAAAAAAAAAGAAGGAAATATTGTAACAATGTACTTCTTCTTCAATGCTATAATGTCATATATAGCAAGGTTGTTAATTATGCTATACTAGATGAATTAAAACTTAATGTTTCGATTATCCTATCAAATTAGGGATGTATATTCCTAATTTTTCCTAATTTAAATGTTCACGAGGTAAGAGCAATTGGGTTATGTGACAAAGTTTCTTTACGGTGATTTATCAAATTAAGCAATTGATGAACATCTCGAAAAGAATGTTGGAAGAATTCAAACTGACTTGGAATATTCAGTGTTGAAAGATATAGTAGCATATACCCTCTTGAGTGTTGAATTGACTACTTCCTAACATTAGAAGATATAGGCTTTCTAAAATATCATTGCGTGGGAAGACTTACAAGGAAGGCTTCACTATGGGTTGTGAGAAAGTTTTTGAATCACATATTCAATAATAGTAATGAAATTGAATCTCACTTATCTTTCATAAAGATATTTATTTCAAAAGAAGAAAAAAGCACTCAATTGGACCATAAAAAACTTGTTGACTGATCATAATCAATCAATATCACAATTTTAGTTAAAGTATCATGGTTGATAAAAGATTTTAGATTTTAATTTCGAAGGATAAAAGAAGAGGGAAGAAGGAAAATACACATAATACTTTTTAGTCAAAAATAAACTTTCAAAGTTAGTTCGTAGTAACCAATTCCAAAGCCTTGGTGCAACCTCAGTTTAAAGTAAATTTTCTTGGTAATATATATAATGAAGATCCTTTATCATTTTATTGACTCACGCTCATAACTAAATTCTGAGGAACGTTCTAACAAATGGATTAAGCCCAGACAACCTTTCAATTTAAATAAAATAATAAAAAAAAAGCTCTTCAGAATGAATGAATTAGTTCAATTCTTCAATTTAAATAAAAAACAAATAGTTTTCATATATGGAAAAGTACCCAATGTAGCATGATGCCATAAATCACGTAAGAAAAAAAGGGTATGTTTAAAATATTATTTTTAGAAAAAAAAATCAAATTGTAGCAATATTTATCCTGTGAGTTGAATAAAGTACAAGTTTGAAGACAAAATGACAAAGTAATTTAAGACAGTGTTTGAGCATGCTATTATCTTAAAATCTTTTGTAAATCTCAGTTCTTTCTAGTGTCCATTTATATCCTTTTCCTTTCCTTTTATTTCTCTTTCTAGTTGGTCAGTAGCAACTAGCAAGTTGGAGCAGGACATGTATAATGAATGTATTTTGCTCTTACATAAATACCACTTTCAGTGAAAGGCCTTAGCTTAACACTTATAGTCTTCTATTATTCCTTCTGAACTCTTTCCCTACAGTTTCATGCATAGGGAGAACCTCTTCATTTGACTCTTACTTTATCATCTGCTTTACCATTTGATTTGCTGGCATCTTCTGCTTCACGGGTTTCCTTCTCACTCTACATCATGCCTTTCTGTTCCATCTCATCATGTGCATCAAACTTTTTTTTTTCTTTCTTTCCCTCCCCAGATTGAATCTTTACTATATTTGCTTATTTTCCAGGAGCTGAAAAAAATGGGAGAAAGTTCTTTGTTCTCTGAGTAGAGTTCGCCAGAGAAAGATAACATTTTTTAGTCCTTTATA


Gene Sequence:
>Vu_06227(-)
ATGCCAGTTCCACTTGCTCCCTACCCTGCACCACCAGCTCCTTATACACCACCAGCTAATGGTATCTTATCTGCCTTTCCCTTTTCTCAACTGCTTAACAAGAAATCTTCCCATCATCTCATTGCTTTTTGTGATGGAATGATTGCAGATTTGAATTCTTACTTCTTTTCCATCATTTGGACTATATTCTAAAATTGAATGTGAAAGTAGCATAACTGAAAAGAAACAATAATTCCTCTTTTCCATTGGCTAAGAAGAGAAGTGATGGATTAGATATGAATATTTTTAAGTGAGATTCTTCTGAGACTCTGATTTGGGTGGAATGTGTGGATTTGAGATGGCTCATGATATGCTTTTCTTTTTTAATTTTGGTTTTCTGAAATAGTCCAATTTCTCATCTGGTGTGGCTTGTAATTTGTAGATTGAACCTCTCTTTGAGAGAGAGAGAGAGAATGCTAGAGCATTTAGAATGTTGTGGCTATTTGTTTGATACTTGGAGTTATTTACATATGAAAAGTTTTCTTGACTGCTGTCAGGTGCACAGAGTCAACTAGTCTGTTCTGGATGTAGAAACCTTCTCATGTATCCAGTTGGAGCCACCTCGGTGTGCTGTGCTGTTTGCAATGCAGTCACAGCAGTGCCACCTCCTGGTACGATGCAGTTTCTACTCACTAAGTCTATTACTCTTGATGTAATTCCAGTGGTGTTTATGTTATTTGAAAGTTGTGTGATTTCAATGAACTGATGATGAGGTAGCTAAATCAGAAACACTAATGTGTGACAGGCACAGAAATGGCCCAGTTAGTTTGCGGAGGTTGCCATACTCTACTCATGTACATCCGAGGAGCGACAAATGTGCAATGTTCTTGTTGTCACACGGTCAATCTAGCGTTGGAAGGTATTTTACTATCAATGGTCTCTCTGATGTTTAAAGAATTGTGTATGCATGATGGACAGAATTTAGGACATGTTTGTCTTGTGAGCTAAATCATTGTGGTTTAAGTCTCTATTTTGAGGGTAAGCATCAAGTGTGTATTGAATCAGCAAATCAGGTGGCACATGTCAACTGTGGGAACTGCAGGATGCTACTCATGTACCAATATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAATTTTGTAACATCAGTTGGGGCCA