Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06233 LG1 92410901 92412619 PREDICTED: NAC domain-containing protein 45
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cell division, response to wounding, cellular response to auxin stimulus, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, cellular response to auxin stimulus, regulation of transcription, DNA-templated, cellular response to auxin stimulus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   sequence-specific DNA binding, DNA binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/A 92410901 stop_lost&splice_region_variant p.Ter262Cysext*?
T/C 92410932 missense_variant p.Tyr252Cys
G/C 92411020 missense_variant p.Leu223Val
A/C 92411197 downstream_gene_variant
G/A 92411324 synonymous_variant p.Leu152Leu
A/G 92411347 missense_variant p.Met144Thr
C/T 92411452 missense_variant p.Gly109Asp
G/A 92411497 missense_variant p.Ala94Val
T/A 92411548 missense_variant p.Lys77Met
C/T 92411550 synonymous_variant p.Lys76Lys
A/T 92411585 splice_region_variant&intron_variant
C/T 92411589 downstream_gene_variant
A/G 92411607 downstream_gene_variant
C/G 92411611 downstream_gene_variant
G/T 92411638 downstream_gene_variant
A/G 92411656 downstream_gene_variant
A/T 92411700 downstream_gene_variant
A/T 92411767 downstream_gene_variant
G/A 92411769 downstream_gene_variant
G/C 92411882 downstream_gene_variant
C/T 92411884 downstream_gene_variant
C/T 92412005 downstream_gene_variant
A/C 92412007 downstream_gene_variant
C/T 92412012 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06233.1
MGGATLPPGFRFHPTDEELVGYYLKRKVEGLEIELEVIPVIDFYKFDPWELPAVNHSELKCEKANSYQGGFALCRVIKKNEKASATKGENKGKRAASSSINGSDTSVRFSGEPFSNSGDSSSHASQLNNESRYSSPITSPYNVAPMGEINQASLETDPSNFWISPDMILDSSKDYPQLQHAVSEYFPRYDLPCMGTQWQSVEHSETPSSFSYSNVNGEVEFADTLSQIGGMSPYSREWNSMDFYGNGDVPYEDYDQINSISYP*


CDS Sequence:
>Vu_06233.1
ATGGGAGGGGCAACACTGCCGCCAGGATTTCGTTTCCATCCAACTGATGAGGAACTAGTGGGATACTACCTTAAAAGAAAAGTAGAAGGGCTTGAAATTGAGCTTGAAGTTATCCCTGTGATCGATTTTTACAAATTCGATCCCTGGGAGTTGCCGGCGGTTAATCATTCTGAGCTGAAATGTGAGAAGGCTAACTCGTATCAGGGTGGTTTTGCCTTGTGCCGGGTTATTAAGAAGAATGAGAAAGCAAGTGCTACGAAGGGAGAAAACAAGGGCAAAAGGGCTGCAAGCAGTTCCATTAATGGGAGTGACACCTCAGTGAGATTCTCTGGTGAGCCATTCAGCAACTCTGGTGATTCTTCCTCTCATGCAAGCCAACTGAATAATGAGAGTCGTTATTCAAGCCCAATTACTTCTCCATACAATGTGGCTCCAATGGGAGAAATTAACCAAGCTTCTCTGGAAACCGATCCTTCAAACTTCTGGATCTCCCCGGACATGATTCTTGATTCTTCAAAGGACTACCCTCAATTACAGCATGCTGTATCTGAATATTTTCCACGGTATGACTTACCATGTATGGGGACACAATGGCAATCAGTTGAACATTCAGAAACTCCATCTAGTTTCTCCTACTCAAATGTCAATGGAGAAGTTGAATTTGCTGATACTCTCAGTCAAATTGGCGGCATGTCACCTTACTCAAGAGAATGGAATTCCATGGACTTCTATGGAAATGGAGATGTCCCTTATGAAGATTATGATCAAATTAACTCAATCTCATATCCATGA


Promoter Sequence:
>Vu_06233::LG1:92412619-92414619(-)
TACCACTTCTGTCATCTTTAAACCTTTTTGTTAACATTTTTTAAGATAAGAATGTTAAATTCTCTTCGATGTTATAAGTATTTACGAAAAACCATACATAATCTTCTTTTAGACGACAATTTAGTATTGCATGATGTTGTAAGAGAATACAATTCTATCAGTGTTACAGTGTGTGTTCTGATTTTAAAATATGCATAAAATGGTAGCCATGCTACTCTTGTTGTTGATGGTATGTATGTGTTCCTTTGATTTAGCTTTTTCTTATCAATTTGCATTAAAGGTTCCAATGAGGTTAAAGATAGAAAAAGCTCCCATCAAATCAATTGTGTGTATTCCTAGGTCTCGTGCACTTGAAAATTGAAAGCTATTCTACCAAACACATTCAATTTAGAATTTACTGAAAATGAATTCGTTGGTAAAATATATTTTACATCAGTGTTATTAATTATTCACTGTGATAAAAGATACAGTTATTACTTTTATAATATTTGTTTTAAAAATTATATTTAAAATTATTTATAATTAATTAATGGACTTTGTGCTTGTAGTCTGTCAGAATTAAGCTCTTTAGTTTATTAAAATTTATCCTTTGTGTTTCTCCTGCGGCATAAAATTATAGTAAGTAGTTAGAGTAAGCCCAGTATCGCAAAACTATATTTTGTACTTTTAATGAAATGCACATATTTTAATGCAACTTTTTTAAAATCAACTTTACTTCAATGGTAATTCAAATATGGCAATAAGCTTCGCAATGCTGTCGCTTTAACACAGGTGATTGCTTTTAACCTTTTTTATTTCCTTTCAAAACGTAACAAATTACGGGTTATATGTTTTCAGCATCACAATGAACATACTTTTCTAAGTGTTCTTTGAAGAAGAAAAAAAGTAGGGATTCAAACAGAGAAAGAATGGTTGTAAGTCCCAAAAAGAGAGGGAGAAATTCTACCAAGAGTGGCTTTTAAGACTCTTGGATAATAATTTTGTACTTTCAACGTTTTCTTATACGGTCAATGTTGAATATACTCACTCATGAATATACTTTGAAAACTGAAACGTACTTTGATGAAATTGGAGGCACAACGCCCTGCTTTTGCTATAGATTTAAGCCAGGTTAAATCATTACCTTACCTGGTTTTACAATCCATTTTTCAACTAGAATGCAAATTAAGGAATAAGCCATTGGGAAGAACCCAAATCGCATGAAATGGAAAACATTAAATAACGGTAAATTAATTGAATTGGCAGGAAGTAAACTATAGTTCGTAGGTGTGAACGTAAACTGGTTGGAGTGGTGGGCCACTTTACTTTGGAATTTTTGGTGCACTTGAGACAAGTAATCTCATTCTCAAACTTTCGGTGTGCTAAATTTTGGACTTTTGGTTCCCTTATCAAATGCTATAAATAGCACACCATCAGTGACTCATGCTTTTACTCTACATTCTCTCATCTTCCTCATCTCAAAGAACTCACACATCCATCACCACTTTCTATTAGTGGGCGCATCTCACTCAATTTCAGTGTTATTCTGAATTTGTTCATTCCTTTTGGAAACTTGTGACGAAGTTCCCATTCTTGTTCTCATTTTTGCTTTGCAAACTTAATTGAGTCGCAGTTATTTTAACTTCTTGATACTACTCATTTAGTTTCATTCATTTTGTTCCAGCTTTCAGGGTTTTGAAACTTAAGGGTGGTGGTGGGGTTGGAGGGGAATAGGTGCCATAAGAGATTTCTAATTTCTTCAAGACGATGATCCTTGCATTTAATGGATGCACTCTGTGGAAGTGTCACTTGACATTTGATAAAAAATCTGTTGTAGACAAAAGCTTCTATTTCTGGATCTTCCAAATCTTTAATAGATATAGTCTTGGCACCTAGCAATAATTATGTCCTAATCCTTCCAAAAGATCCTGGAAACTACTTTTTTTTTAATCTCTTGCTATATAGCTTTGGTTACTTTTTCTTCATCAGCTTCACAATTTTTTGTGACTCTTTCTTTCAAT


Gene Sequence:
>Vu_06233(-)
ATGGGAGGGGCAACACTGCCGCCAGGATTTCGTTTCCATCCAACTGATGAGGAACTAGTGGGATACTACCTTAAAAGAAAAGTAGAAGGGCTTGAAATTGAGCTTGAAGTTATCCCTGTGATCGATTTTTACAAATTCGATCCCTGGGAGTTGCCGGGTAATCTTCGATTTCACATTTTGATAATTTTATCAGCACCCTTACTATACTATGCAGAGACGTAAAAAAGAAACCTTTCTGATGCAAGTTTAACATAGTAAATGGACCAGACCAGTGTGAAACGCAACTTTATGAACACCACAAAGAAAGCGAGTGACTGTTTTGTCTGTTTTTCTTTTCACTTTTTCTTTAGCGGTTAATCATTCTGAGCTGTAAAACTAAAAGCTGTTCGATACGAATTCCTCAGTAAAAAAAAGAGTCATGGTTTTACTGGATTTATTTGTTGCATTTTATTTTTTCTCGTAAGGAAATGTGAGAAGGCTAACTCGTATCAGGTGTGTAATGCAGAGAAGTCTTTCCTTCCAAAACGGGATATGGAATGGTTTTTCTTCTGTCCACGGGATCGCAAGTACCCAAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGGTATTGGAAAGCCACCGGAAAAGACAGAAAGGTGGTGTGCCAGTCTGATCCATCCAATGTTACTGGGTACCGCAAGACCTTGGTTTTCTATGCTGGGAGGGCCCCTTTAGGAGATAGAACTGATTGGGTCATGCATGAGTATCGCCTCTGTGATGATCTTGGCCAACCCACACCTTCTTTCCAGGTACAATCACATTCATGCCATATTTTGGATAAATTTCTGTTTTAACATTGGTTAAAAACATCTTATGTACTTCAACTTTTATAAAGCTTTTGTCTCAAAATAAAAATTGAGGTGTATAAGTTAAATTTAACTTGTAAAAGAATTTTGATTCTTCTTTGTTCTTTATTATCTTCTTCTATAAAGGGTTGGCTTTAATTTGCTAGGGTAATACTGAAAGACTTCAGCTAGTTTGTTTGTGGTCATTGTAGGGTGGTTTTGCCTTGTGCCGGGTTATTAAGAAGAATGAGAAAGCAAGTGCTACGAAGGGAGAAAACAAGGGCAAAAGGGCTGCAAGCAGTTCCATTAATGGGAGTGACACCTCAGTGAGATTCTCTGGTGAGCCATTCAGCAACTCTGGTGATTCTTCCTCTCATGCAAGCCAACTGAATAATGAGAGTCGTTATTCAAGCCCAATTACTTCTCCATACAATGTGGCTCCAATGGGAGAAATTAACCAAGCTTCTCTGGAAACCGATCCTTCAAACTTCTGGATCTCCCCGGACATGATTCTTGATTCTTCAAAGGTATATATCTAAGTAGAAACAAAGAAAGAAAGTTGAGATTGAATAAGTAGTTTTTGGAGAAGTTGCTTACTTTTTCCTTCACTAACTGCAGGACTACCCTCAATTACAGCATGCTGTATCTGAATATTTTCCACGGTATGACTTACCATGTATGGGGACACAATGGCAATCAGTTGAACATTCAGAAACTCCATCTAGTTTCTCCTACTCAAATGTCAATGGAGAAGTTGAATTTGCTGATACTCTCAGTCAAATTGGCGGCATGTCACCTTACTCAAGAGAATGGAATTCCATGGACTTCTATGGAAATGGAGATGTCCCTTATGAAGATTATGATCAAATTAACTCAATCTCATATCCATGA