Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06325 LG1 93719934 93725925 PREDICTED: transcription factor MYB1R1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to abscisic acid, response to absence of light, response to auxin, response to auxin, negative regulation of transcription, DNA-templated, post-embryonic plant organ morphogenesis, negative regulation of transcription by RNA polymerase II, regulation of transcription, DNA-templated, response to ethylene, negative regulation of peroxidase activity, positive regulation of cell growth, leaf development, positive regulation of cell growth, response to abscisic acid, negative regulation of transcription, DNA-templated, response to ethylene, lateral root development, leaf development, response to absence of light, response to ethylene, leaf senescence, regulation of transcription, DNA-templated, auxin homeostasis, response to auxin, auxin homeostasis, negative regulation of transcription by RNA polymerase II, negative regulation of transcription, DNA-templated, negative regulation of peroxidase activity, response to auxin, post-embryonic plant organ morphogenesis, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, post-embryonic plant organ morphogenesis, negative regulation of transcription, DNA-templated, negative regulation of transcription by RNA polymerase II, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, response to gibberellin, positive regulation of cell growth, negative regulation of transcription by RNA polymerase II, negative regulation of transcription, DNA-templated, response to gibberellin, regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, response to ethylene, leaf senescence, lateral root development, negative regulation of transcription, DNA-templated, negative regulation of transcription, DNA-templated, positive regulation of cell growth, lateral root development
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, zinc ion binding, protein binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
G/A 93720150 start_lost p.Met1?
G/A 93720832 intron_variant
A/T 93720840 intron_variant
T/A 93721547 intron_variant
G/A 93721710 intron_variant
G/T 93721765 intron_variant
T/G 93721766 intron_variant
G/A 93721912 intron_variant
T/C 93721937 intron_variant
G/T 93722151 intron_variant
G/T 93722220 intron_variant
G/C 93722643 intron_variant
T/A 93722648 intron_variant
A/T 93722653 intron_variant
C/A 93723100 intron_variant
G/C 93723107 intron_variant
T/G 93723114 intron_variant
T/A 93723396 intron_variant
G/A 93723508 intron_variant
A/T 93723517 intron_variant
C/T 93723872 intron_variant
G/T 93724060 intron_variant
T/A 93724745 intron_variant
G/A 93725266 synonymous_variant p.Leu263Leu
C/G 93725299 missense_variant p.Ile274Met
C/T 93725362 synonymous_variant p.Gly295Gly
T/C 93725577 3_prime_UTR_variant
G/T 93725580 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06325.1
MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSIRKSASMGNLTHYAGSGSGPLHAGSNNPGSPGETPDHATAADGYASEDFVPGSSSSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQSNVSRRKRRSSLFDIVADEAADTAMVQQDFLSANQLPVETEGNNSLPAPPPLDEECESMDSTNSNDGEPAPSKPENTQSSYPVLYPAYYSPVFPFPLPYWSGYNPEPAKMETHEVLKPTAVHSKSPINVDELVGISKLSLGESIGDSGPSSLSLKLLEEGPSRQSAFHATPTCGSSNMNGSAIHAV*


CDS Sequence:
>Vu_06325.1
ATGACCCGACGTTGCTCCCATTGCAGCCACAATGGGCACAATTCCAGGACCTGCCCCAATCGTGGAGTTAAGCTGTTCGGAGTCCGATTAACCGACGGGTCGATCCGGAAGAGTGCTAGTATGGGTAATCTCACCCATTATGCTGGTTCCGGGTCCGGACCTCTCCATGCGGGGTCAAACAATCCGGGTTCTCCTGGTGAAACCCCCGATCACGCTACCGCGGCCGATGGTTACGCCTCCGAGGACTTTGTTCCCGGTTCTTCTTCGAGCTCCCGTGAAAGAAAGAAGGGTGTTCCGTGGACTGAGGAGGAACATAGAATGTTTTTACTCGGATTGCAGAAGCTGGGCAAAGGTGATTGGCGTGGAATTGCAAGGAACTATGTTATATCAAGGACACCTACTCAAGTGGCTAGTCATGCACAAAAGTATTTCATCAGGCAAAGCAATGTGTCCAGGCGGAAAAGACGGTCCAGCTTGTTTGATATTGTTGCAGATGAAGCAGCTGACACTGCAATGGTACAGCAAGACTTCTTGTCAGCTAATCAGTTACCGGTTGAAACAGAAGGCAATAACTCCTTGCCTGCGCCTCCTCCCCTCGACGAAGAGTGTGAATCCATGGATTCCACAAACTCAAATGATGGAGAACCTGCCCCATCAAAGCCTGAAAACACACAATCATCTTATCCAGTTTTATATCCTGCATACTATTCTCCAGTGTTCCCATTTCCTCTGCCCTATTGGTCAGGATACAATCCAGAGCCCGCCAAGATGGAGACGCATGAAGTGCTGAAGCCAACTGCAGTACATTCTAAAAGCCCAATCAATGTTGATGAACTGGTTGGCATCTCAAAACTGAGTCTAGGGGAGTCTATTGGTGATTCAGGCCCCTCCTCCCTGTCTCTTAAACTTCTTGAAGAAGGACCCTCGAGACAGTCAGCTTTCCATGCAACACCAACATGTGGTAGTTCAAATATGAATGGCAGTGCCATCCATGCAGTTTAA


Promoter Sequence:
>Vu_06325::LG1:93717934-93719934(+)
AATAAAATTGTTATTATATTTTAGTTGCATTCAAAAGACATTGATTATTTTCAAACAGATAAGGTAGAATATGTGATTATTTTATTACATGCCACTTGCCAAAAGTGTTTGGATAAGGAGTAAATGAATCTGCATAATTATCGGTTTAATATTTTATTGGATACTATTTTAAGATAGTTTTTGGGCCAAACAAATGTTTGTCATTGTTTGTTTTGAAGTGTAACCTTTTTTTATTTCCAAACAAAGTATTATATATACCTGATAATTATATATGTGTTTTTGCTTATACCTTTACTTTTATAAAGCTAATGATTCTTTATTTATATAATTGGCAAGTAGATGTTTAAACCCATCTTCAGAAAATAAATATTCAATAAACAATATAAATATGTCATATTTAAAAAATATATTCTCTAAAATTTAATGTTTTAATAAATTTATTTAGATATTAATATTCCCTTTGAGTTTAATGTGCTTGTTATACTAATAGTTAATTAAATGTTATTAACAATATAATTATGTAAATAAATTAAATTAAACTATATCTCAAGTTTGATGAAAACTGAAATGAACCAAAATTGTTATAAATTGTTTAAATAATTTTAGATAAATATGTTATTCTAAAACATTCTGAGTTTTATAAGTTACAACTTAGTTCAGTTTAATTATAATATTTTTTTAATTAATTCAACTTTTAATACAATTTATTCCAATTTGATACCCATTTGAATTAGTTTCTTTAACGGTTACTAAATCATATAAAAATTTTTTCACATTTCAAAATTAAATTAAATATTAAAAAACTACCAAATAAAAGTATTTTATATTGAAATTTCAATAATTCAATGTATATTTAAAATATAATTTTTATATTACAATATATTTTTATCATGAATTTTAATATGATTCAGATATTAATTTTTTTTATAAGCTATAATTAGATAAAAATAATGTTATATATATATATGGAGATAAATGTTAACAGAATTTTATTCTTCTTTGATTACTGATTAATATAAGCCGATAAAGCTGATTACTGTTACACTTAAGACAAAAGCAAAGTCTGATAAGCAATGTTAAAGGTAGTTTCCTCAATATTATCTATACTATTTATAAATAAATATTACAAGAAACACGACGTATAAATTATACTTATATGAAAAAAATTTAAATAAATATATGAAAATAAATTAATGTAATACTTTTTAAATATAATCAAATATATATAATCAATAATTACTTTTATACTTTTAAAATTTAACAAAAATAATTAAAGTTTTATTATAATTATGCATTTGTAATTAGAAAATATAGAAATCAAACTTTACATTTAATTAATTTTAACAGAACAGTGACTAGTTTTTTTTATTCATTTACTTATAAATTACAAGGGTATATTTTTAATAATTATTGAACATTTATATTTACAATTAACTTTTATTTTAGTTTGAACAATCCATAACTTTTACATGATTAACTTATAATAAATAAATATTTGAAATATGTAAGTTATATTTTATCTCTGAGTAATTAAAATATTTAAAAAATACAAATAATTTCTTAACAAAAATTAATTTATAAAAATTTCTAGAACCACAACACGCGCATCCGATGATAAAAGTTTGTATGGATTAATTTTGACGGTATAGAATTAATAATAATATAAAAATATTACAATAAGAAAATACAAATATTTTTTTAATTAAATTATAACTTTTTTTTTATAAAAACACGCGTCACAACCTCGTAAAATTAATTTGAAGTAACGTGCAAGGAGGCACGTAACTATCTGATACTCTGATTAACTTGATAAGCAACTATTGGAAAGCGCACCCTATCCTAAGTAAAAGGTCTCCAAATCTGTGCCACGTAAGATCCCACCTACTAAGTGAACAGTCCAAAGTGAAGGACCACGGTTCCCAATACAGCTGAGATGCATCGTAATTATTCCCTTTATCCAGGACAAGATAAATGGATAGTGTTGTGCTGATGGTCATCTC


Gene Sequence:
>Vu_06325(+)
CTCTTTCTCTCCCATCTGCGAAAGCCGAGGGAGACCGTAACAAAAAACATTACATAACCCAAAACAAACACATCACAATACCTATTCCCTCTTACCACACCTAAATAACCTTAAAACTCCCATTTCATGTCTCGGATCCCGTGATTCGGATCCCCCAAGACCCGCTCCCACAATCTCGTACTTTCCTTTCGGCCGATCCGGTTGGGAACGCGCCATGACCCGACGTTGCTCCCATTGCAGCCACAATGGGCACAATTCCAGGACCTGCCCCAATCGTGGAGTTAAGCTGTTCGGAGTCCGATTAACCGACGGGTCGATCCGGAAGAGTGCTAGTATGGGTAATCTCACCCATTATGCTGGTTCCGGGTCCGGACCTCTCCATGCGGGGTCAAACAATCCGGGTTCTCCTGGTGAAACCCCCGATCACGCTACCGCGGCCGATGGTTACGCCTCCGAGGACTTTGTTCCCGGTTCTTCTTCGAGCTCCCGTGAAAGAAAGAAGGGTTGGATTTCTTATCTAAAACAATATTACTTTTTTTTTTTTACTGGACTTGAAGGTTACTCGTGGAATTGCATGCTGGTTTTTGGAAATTGGTTGGGAATTGGAATGTTTTTTTCGGTGGTGTTTACACTGGTTGATTGAGTTAGGTGAAGTGAATTAAATTGGGTTAATTGTGTGGTGGATTGTTTTAGTTTGGATAAAGCTATTCTTGGTCAAAAAAATATTTCTGTTTTTGTCTGTTGTCACTGTGGGAATAACTAGACAAGAAAGTACTAGTTAACTTTATGAAGGGTTCTTTTTTCCATGATTGAATAGTTTGAGTGTTTGTGTGAAGTATGTATTTATGCTTGGCTGGCTAGATTTTGAATCTGGAAAATATTTAGAAATGGATTGGGTGTGTTTCAATTCCGTAATTACCATGTTCTTTGAGAAGAACTGGCTTGTTTGGTTCACTGAAGGTTCTAATTGGTGAGGAGCTTATCTGTCTAAGTTTTTGCTAGTTGACCTGTGAAAAAGACCAGGTTTTGAGCCAGATTAGCCTAGAGACAACTTATGTGCCTATAGACAAGTTCATTATGCTTTCTATTGGATTTCTTTTTGTTTGCTTTGAAAGTGTTCCGTAACTATGGGGGTACGCTATGTGTATATATTTCTCTATTTCAGCTACATGGAAACTGCTGCTGTAATTTCTGGACATTTTTGTTTTTAATAAACAAGGTAACCAACTAGTTCGAAGAGCTTTATGTAAGTTTAACAAGCATTGATGCAGGCTCTACACTGACTGATGCTCATGCTAAATATATCAGATGATAGGGTGACAGAAGTGCACTTGTAGGTCACAGGGCATTTACACTTTTTGCTACTAATTGCAAATAGGATATCTCCTGTTCATAAAAAAATGGTGTTTGAGAACACCAGTTTGATAGTACAGTTCTATTTGTTTCATGCACGCTGTAAACATGATTGATATATTGACCAAGTCAGGTTCCTAGTCCCCTCTTTGCCTCGTACCTACCCACCCATAAAATATTTTTGAACCTCTTGTTAGAAGAAGGTTGTGAGGGGGTTACCTTCTTGTTCTGGAGTCATATTCCTCTTCTTAATTGACTCCTTGATACTTCAAGGGAAACACCTGGTATTGGTTTAGGTACTTTAGTTTCATTTTCCAGCTTATCCTTGAAGGTGATTGAGTCATTATGTAACATCTAGGCTTCATGTTGGGGTTGTACATTGAGTGTAGGGGGAGGAATAGGTCTCATGATCTATCATGGGCCGTTTACAATCCCTTGGTTAGTTTCGAGCTTGTATTCACAGTTATTGTCGTACTATGTATAATGCAGAATTACAGTAAAGAAAACTTATAAAATAAAATATAAACATCTCAATCTTGGATTCCAAAGGTATATTACAATTATTAATCATCAATCCTTATAATGTTGTAATTAAAAGTAAAAAGACTAATGAATGCTCCACATAGTAGGACTTCAATAAAAGCATGACATTCACTGCTTTCCTGCAAGCCCTGTTTAATCTAAAGCATTTTAATTTAAACTAATAAAACGAAGGTTTAGTTGAGCGTCCTAAGGACAGAATAACATCTTATATTTTCTGCATAAACTGTTATAACATTCTCATAGCTTTATAATCTTTCTTAGCTTTCATTACTTTAGCTTTTCTTTTCTGTCCTACTGTCAAACTTGAGCTTATAATCTCGAGGATTGTCTTCCTTGCTTTTTCCATACATCCTTCCCTTGTCAAAGAGAATCTAAAGGGAGTCTTTGATAGCCGAAGGATGAGACCATCTTTTGACAACCGAAGGAGATGAATATTCTTTTCTTGTAAAAGGGAACGTTCTGGCATAATATTCTTTCCCTTAACATAAATTTTTACGTATATTTATGTTCCTTAGTTTGAGGAGTGTCAACCACTATTTGGAGATTGAAGGAGTTATTATCCTTGTCTTGCCAAAGAGGGTGTACAGACTTATACATGCTTTCTTATAAACAATTATATCTTGGTCATTGTATGAGGTAAACATGCAATCCGTCTTTCAACTAGGAGGTAAACATATCATTCATGTATGGAATAAAATATTGATATTCATTCATATAGAGTATTAATAGGGGCATTTCGTAGTCACCCAAACCATTCCAATCATGAAAAAAAAACACATAATATTAGTCAATTAATAATTATAAAAGCCCATAGAAAATCACTAATAATGTATTGATTTGTCTAAACCCTAATGGAACTCTAAACACATTCATTCATGAATTTTAAGAAACATATACTCGATTGAAAGAAATTATTCATACAATATGGGAAGTGGGAAGCATACAGTGGGCTGCACTTACCTGGGACAATTGACAATTCTAAAAACAGGGTGTTTAGATTTTCCATTCTTCTTTCCTCTATTCTTAACTTCTCTCTTCCTTCCTTTCTCAAATATTTGTGCTCTATGAGAATATGGTATGACTTAGGGTTCATAAATCTTACTTTTCTTTAAAATTCCATCTCTTTTTTACTTGACTTAAGCTCATTTATTTAATTATAGTAATTTCGTCATATTTATTATATATATTATTATTGTTATCATCATCATCATCATCATCTAATTAATAAACTAGGATGCTATGTTTCTTAGCGTTTCCATATTACATATTGCTCTAATGATTAGATCATAATGATAACTTGTCACCTTTATTTCCTCCTTTAATGCTGTGTGAGCATTTATACATTTTTTTTTTGTTTTTTATTTTATTTTCACATTATGCTTAGCTATAGTCCTATCTTCAATATATTTTCTTTCACATTATTGTGATTCTAACTTCCCACTTGCTAAAGATCCCTGGACAGAGTAAAATGTGTTAAGGATGAAAAAGGCAACATGCGCCTATGGAATAAAATATCATTGAATGATGTATTAGAAATTAAATGGGATGAGCTTACTGAACATATCCTATAGTTGATGCCACATGCATGATTTTTGCATATGATATAGTCCTAGTTGGAGATTTTAGAGAGAAATTAAATGGGATAGAGTGTAGACTAGCTTTGGAAGCTTGTGGCTTCGATTTAAGCAGGGATTAAAAGAGTGTATGAAATGTAAGGCTAGCTAGAGGCACATCTTTCCTACCTTAGAGGTGAGAACTTGGAGAACATATGTTATTATTTCCAGTCGCATGGTTTAAGTATTATGGATTCATCATACACAAAGAATGGAGAAGTGGTGGGCGATGTCAACCATGGTATTCAAGTAGGGTGGATAAAATGGATGAGTGCCTCAGGTGTTCTTTGTTACGAAAAGGTATTCGAACTAAAAGAAAAATTTCCTACACGACTATAAGCTCAATGAAGGTGAGATGTACTCAGGTGATCAGAAATCAATAAAAAAATAAGCTCAATGTATTTGAGATGAGAATTTGACGGTGGATATCTTTAACATACTAGAGACAATATAGGATTTGGAAGGAATGAATTAGAGAGAGATTTGGGATAGCACCTGTGGTAGAAAATCTATTAGAATATCCCTCAGGTGGTTTTTACATGGACAGAGAAGACCTGTGGAATCGTTACCATGAAAAGTATATTGGATGGAGGGTAGCCCTATGATTAGAAATAGAAGAAGACCCAGAAAAGTTGTAGGGAAAACCATTGAAACTGACTCGAGTTCGATTCTTTGTGTATAGATATGATTCACAATAGAACATTATGGTGTCGTTTGATATCATCTAACTGAATACCCGCCCCCTTACCTCCCTAGTGGGTCTTTGTTTATTGTTGTAAGCTTGGCTCTGACGAGTCTAAAGATTTTAATTTGTGATCCATTTATGGCCAAGCCCAGTTTTTTATGTCGCTATGTCAAGGTTTAATGTACAATTTCTTTTGTGCAGGTGTTCCGTGGACTGAGGAGGAACATAGAATGTTTTTACTCGGATTGCAGAAGCTGGGCAAAGGTGATTGGCGTGGAATTGCAAGGAACTATGTTATATCAAGGACACCTACTCAAGTGGCTAGTCATGCACAAAAGTATTTCATCAGGCAAAGCAATGTGTCCAGGCGGAAAAGACGGTCCAGCTTGTTTGATATTGTTGCAGATGAAGTTTGTACCCTTATTCATCAAAATGCATACCTAGAAATTGATGCTGCATAATCTGTTCATTACTTCATGGGCATATATTAGATTATCCAAATATGTTTCTTTCTTTGTAGATGGTTTGATATGTTCTGGCTCCTGTGACAAATAAGTTAGTTAAACTCAAACTATATATTGATGTCTGTAATGTATGAAAAATTCTCATTTCCTTTCTTCTGCAGTGGATTTGACAAATTTGGATCTTGACTAGCTTACGAGTATTGATTATCAAGCTCTGCTTAGATTATATTTCAAAACATTGCCCTTGAGTAGTTTAGAGATAAACATTGCATTTTCTCATGGATGCTTTTACAAATTCTGGTATTGGAAATCTGTAATTTCCCTTTGTCCTTGGACACTTCTAATTTTTCCAGGTTTCTTGTATTTTTTGTTGTGATTTTGCAGGCAGCTGACACTGCAATGGTACAGCAAGACTTCTTGTCAGCTAATCAGTTACCGGTTGAAACAGAAGGCAATAACTCCTTGCCTGCGCCTCCTCCCCTCGACGAAGAGTGTGAATCCATGGATTCCACAAACTCAAATGATGGAGAACCTGCCCCATCAAAGCCTGAAAACACACAATCATCTTATCCAGTTTTATATCCTGCATACTATTCTCCAGTGTTCCCATTTCCTCTGCCCTATTGGTCAGGATACAATCCAGAGCCCGCCAAGATGGAGACGCATGAAGTGCTGAAGCCAACTGCAGTACATTCTAAAAGCCCAATCAATGTTGATGAACTGGTTGGCATCTCAAAACTGAGTCTAGGGGAGTCTATTGGTGATTCAGGCCCCTCCTCCCTGTCTCTTAAACTTCTTGAAGAAGGACCCTCGAGACAGTCAGCTTTCCATGCAACACCAACATGTGGTAGTTCAAATATGAATGGCAGTGCCATCCATGCAGTTTAAGGGTGTTCCTCGTCTTCCGAGGAAAGGATTGTTATGTAAGCATTACCGTTCAATGCCGGCCTCATGAATGTGGTCTTGTGTTCATCATACATCTGTTTGTGGGGTAACTTAAATAATTTTTTCTTTGTCCATTCACAATGATTAACCTAGTTTCTTTATTTGCTGATAGGCAGGTCTAGGAGTTACTTGGGTTCTAAACTAAAACTTTGTGTTTGTTTAGTGATTTCATTTGTCAGGGTTATGTAAAGTTAAGGTTTGATTGTGCAGTTTGACAATGTACCAAGTTGTGCTAAATGTTTTCAAGTGCTGGATTAGAATGTTTGAAGTGCTTTACCTGATCAAACCGGTCTCTCCTGAATTAACAGAGTGAGACAGAAAATGAAGAGCACAAATTGTAGTTACTTGGTAGGGCTTGAAATGGGTTGAGATAAGTTAAACTCACTTTG