Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06327 LG1 93767002 93767679 PREDICTED: ethylene-responsive transcription factor ERF038-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   cell wall organization or biogenesis, plant-type cell wall organization or biogenesis, carboxylic acid metabolic process, regulation of transcription, DNA-templated, response to red light, glucosinolate metabolic process, regulation of transcription, DNA-templated, glucosinolate metabolic process, regulation of transcription, DNA-templated, carboxylic acid metabolic process, cell wall macromolecule metabolic process, cellular polysaccharide metabolic process, regulation of transcription, DNA-templated, cellular polysaccharide metabolic process, cellular polysaccharide metabolic process, cell wall macromolecule metabolic process, glucosinolate metabolic process
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 93767141 missense_variant p.Lys47Arg
C/G 93767469 synonymous_variant p.Ala156Ala
G/A 93767472 synonymous_variant p.Glu157Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06327.1
MDMEESNPMETQLQPTSSSSSFSITASTSTSSSSSSVDQQPSNTKDKKTKKTNVNTNHGNHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAFLNFPELAAELPRPTTNSPKDIQVAAAKAAALDFRPRSHEAESELSRGGSISNSSSNSSLKSEDDTFMDLPDLSLDLSHGVDKFHYSSAWLVAGSELGFRLEEPFLWESY*


CDS Sequence:
>Vu_06327.1
ATGGACATGGAAGAATCAAACCCTATGGAAACACAACTTCAACCAACCTCTTCATCATCCTCTTTCTCCATTACTGCCTCCACCTCCACCTCCTCCTCCTCTTCCTCCGTAGACCAACAACCCTCAAACACCAAGGACAAAAAAACCAAGAAAACCAACGTTAACACCAATCATGGCAACCACCCCACGTACAGAGGAGTGCGCATGCGCCAATGGGGCAAATGGGTCTCCGAAATCAGAGAGCCCAGGAAGAAGTCAAGAATTTGGCTCGGAACTTTTCCCACGCCGGACATGGCGGCGCGAGCCCACGACGTGGCGGCTCTCACCATCAAAGGCAGCTCCGCCTTCCTCAATTTCCCCGAATTAGCCGCCGAGCTGCCCCGCCCGACCACGAACTCCCCCAAGGATATCCAAGTGGCCGCCGCCAAAGCCGCCGCCTTGGATTTCCGCCCTCGAAGCCATGAAGCCGAGTCCGAGCTGAGCCGAGGCGGCTCCATTTCCAATTCTTCGTCGAATTCTTCGTTGAAGAGTGAGGATGACACATTCATGGACCTCCCCGATCTCTCTCTGGACTTGAGCCATGGAGTTGATAAGTTTCATTATTCCTCGGCTTGGCTCGTAGCCGGAAGCGAACTGGGGTTTCGGCTTGAAGAGCCTTTTCTTTGGGAATCATATTAA


Promoter Sequence:
>Vu_06327::LG1:93765002-93767002(+)
TTTTCAAACAAAACAATATAATAAGGAAAATATTGAACTCACATTACAGAATTTTAGATTGTCGGAATAATTATACAACCCATAATAATCTTTTCCTGAATATTTGTTCTATTGAAAATCAAATTTATAAACCATGGTTTTGGTACTAATTATGGAATTGATTGTTTATTGTCAGACCAAAAGTTATAATTGATATTTAGAGTGTAACTTCTTTACTTAGTCAAATATCATGAATTAATTATGACTTGATTCATATAACTTTTGTCATGAAATAATTGAGGCATTATGTAAAATTTTAATTATTATTGGATCACGTGATGGTAATCCAAAATATTTAAAGTTAAATGATCAACAATTTTTAATGTATGATCTAAATTATCCATACTTTTAAATATATTGTTTAAATTACCAATAATTTTAAAAATGTAATCTAAATTATCCATATTTTAATAACAATTACCTATAACTATATACATTTTTTAATACATTGTTTAAAATAAATAGCTAACATTTTTATTATACAAGATAAATAAATTCAGTATACATACAACAATAAAAAAATATAATCGATTGCTATTTTAGACAATAAATTTGGAAGTATTGTCATGTAAGTGCCACATAATCTATAAGATTAAATGATGTAGGGTCATTTTAGATTCAAATAGAGATACGTGAAAGACATATTTAAGCACATCCTTAATATCACTTAGATTTTAACCTAGCTATTAATTTATTTAAGTACAATTTTAACTATGAAAATGATTAAAAAAACAAATTGGACTGCATACTTGCCTGCTACGCTTATTTAACACACCACCACCAGATTAAAAATAATAAAAAGCCCATAAAGATTAAAAATGAAAAAGCAACAAAAAAGCAAGAGAATGTTCTACAAGCAGAGACATCGTGGAAGAATATGAAATTGAATGATGTCGTCATTTGCAGTCACCACTGACACACACGTCCACCTGCTTCACCATTACAGGAGGAATGTGAAAAACGAAGTAACGAAGGCAACTAAAACATATATAATTCAGTGTTTTTTCTTCTTATTAACTTTTTCGATGATTAGTTTATAAAAAATATTATAATCTGGTTAATGATCTATAATGAATTAAAAAGTTGCCGTTGAAATAAAAATGAGACCTGGTTGAATTCTTTGTTTTTGTTCTGGGTTGATTTGAAAAGGGTTTGGCTCGTATAAAGGACATTATAAGCTTGAGGACATGGTCTGTTTTTGCGAAGAACAAAATTAGATGGGTCCACCAACTTTGGTACGTACCAAAAATATCGTCTTTTGTGAGTGAAAACAAAATGTGGTTAAATTGAATTGAATATATTAGGACCATTGCGGTCCATTTTTTATTATATATTTTTCTCCACTTTTTGATTTTGGATTAAAGATAACTACACAGATGCGGACAGAGTGACACCTAATCTCCACATAATGATCAATTATGTTATGATGATGATGATGATGCATAAACATGCCACTTATGATCCAAGAGCCCACCATTCGGGGATTAAAATCGCCCCCTCATCGATCCAGCCGTTCGATTAGCGTGAAATGACATTCCGCCAGCAAATTAATTAAAATTAAATCATTCCACAAAAAGTAGCTTTAATAATTAGCATCAGATAAAACAGGGTTAAAAACAAAACCAAATAATAATAATTAATAGAACGATACTTAGGGTTACGAGAGTGGCGCAAAAGACTATGATTGGACTTAACCATGTATAATTCTACTGCCTGTATTGCGCGAAAATGCGAGAAAGAAAGAAAGAGAGAGAGAGAGAGAGAGAGGTAGAAGAAGATAATGAAAAGTGCAAACAATGCAATGCAACTGTTTATCTTTTTCACTTGGACCCATTTCTTTAATATGGGAAAGAATTATAAGTACTTAGTAGTTCACAGCTCAACCCACCTCTATTTCAAACCTCTCAATTCATCACATTTTCTCTTCAAACACTCCATCAACAATAATTTCTCTTCCCCAA


Gene Sequence:
>Vu_06327(+)
ATGGACATGGAAGAATCAAACCCTATGGAAACACAACTTCAACCAACCTCTTCATCATCCTCTTTCTCCATTACTGCCTCCACCTCCACCTCCTCCTCCTCTTCCTCCGTAGACCAACAACCCTCAAACACCAAGGACAAAAAAACCAAGAAAACCAACGTTAACACCAATCATGGCAACCACCCCACGTACAGAGGAGTGCGCATGCGCCAATGGGGCAAATGGGTCTCCGAAATCAGAGAGCCCAGGAAGAAGTCAAGAATTTGGCTCGGAACTTTTCCCACGCCGGACATGGCGGCGCGAGCCCACGACGTGGCGGCTCTCACCATCAAAGGCAGCTCCGCCTTCCTCAATTTCCCCGAATTAGCCGCCGAGCTGCCCCGCCCGACCACGAACTCCCCCAAGGATATCCAAGTGGCCGCCGCCAAAGCCGCCGCCTTGGATTTCCGCCCTCGAAGCCATGAAGCCGAGTCCGAGCTGAGCCGAGGCGGCTCCATTTCCAATTCTTCGTCGAATTCTTCGTTGAAGAGTGAGGATGACACATTCATGGACCTCCCCGATCTCTCTCTGGACTTGAGCCATGGAGTTGATAAGTTTCATTATTCCTCGGCTTGGCTCGTAGCCGGAAGCGAACTGGGGTTTCGGCTTGAAGAGCCTTTTCTTTGGGAATCATATTAA