Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06591 LG1 96778151 96780160 PREDICTED: L-type lectin-domain containing receptor kinase S.1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to bacterium, defense response to oomycetes, defense response to bacterium, defense response to bacterium, defense response to oomycetes, defense response to oomycetes, defense response to oomycetes, defense response to bacterium, protein phosphorylation, protein phosphorylation, defense response to bacterium, defense response to bacterium, protein phosphorylation, defense response to oomycetes, defense response to oomycetes
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plant-type vacuole, plasma membrane
Molecular Function   enables   transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, kinase activity, transmembrane receptor protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/T 96778161 missense_variant p.Ser4Leu
A/T 96778165 missense_variant p.Lys5Asn
G/T 96778179 missense_variant p.Gly10Val
T/A 96778180 synonymous_variant p.Gly10Gly
G/A 96778196 missense_variant p.Gly16Ser
G/A 96778204 stop_gained p.Trp18*
C/T 96778228 synonymous_variant p.Leu26Leu
G/A 96778229 missense_variant p.Ala27Thr
T/C 96778277 missense_variant p.Phe43Leu
C/T 96778297 synonymous_variant p.Leu49Leu
T/C 96778495 synonymous_variant p.Pro115Pro
G/T 96778566 missense_variant p.Gly139Val
T/A 96778569 missense_variant p.Leu140Gln
T/C 96778572 missense_variant p.Phe141Ser
A/T 96778574 missense_variant p.Thr142Ser
T/C 96779539 downstream_gene_variant
C/T 96779540 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06591.1
MSPSKILVAGEIPYSGMWLVILLLHLAVFATPSLCLDFLFNSFTGITNLTLVKDARVDASVIRMTNDSNQYSYGRVFYPTKVPITKPSSNSSSSSITSFSTSFVFSVLPQITTSPGFGLAFVLCNTTDPPGALASQYFGLFTNATSPTFFPLVAVEFDTGQNPEFNDIDDNHIGIDLNNIESTFSTPAGYYNSTGGFVPVRMRTGQNIRAWIDFDGQNLLFNVTVAPIGVSRPTRPTLSHYVPTIGNYVSTDMYVGFSASKTNWIEAQRVLAWSFSDSGQARELNTTNLPVFEPESSTSSLSGGAIAGIVIGCVVFVVICGCGVYLWWRIQKGKDEQDEIEDWELEYWPHRFSYEELSSATGEFGKEQLLGSGGFGRVPNTTRVVGTLGYLAPELATVAAPTSASDVYSYGVVLLEVACGRRPIETSVAEEEVVLIDWVRELYAKGCAREAADARIEGEYDEEEMEMVLKLGLACCHPDPQRRPTMKEVVALLLGENPPEAPGKVLSDLVRGGDDLDEAAPLQPSSTRV*


CDS Sequence:
>Vu_06591.1
ATGTCTCCTTCAAAAATCCTCGTTGCCGGTGAAATACCATATTCCGGCATGTGGTTGGTTATTCTTCTTCTTCACCTCGCTGTCTTTGCGACTCCTTCACTTTGCTTGGACTTCCTATTCAACTCCTTCACCGGCATAACCAACCTCACTTTGGTGAAAGACGCTCGCGTGGACGCATCGGTCATCCGCATGACCAACGACTCCAACCAGTACTCCTATGGACGCGTCTTCTATCCCACAAAAGTTCCCATCACAAAACCTTCTTCCAATTCCTCATCCTCATCCATCACTTCATTCTCAACCTCTTTTGTCTTCTCCGTCTTGCCGCAAATCACTACCAGTCCTGGCTTTGGCCTCGCCTTCGTCCTCTGCAACACCACTGACCCTCCCGGAGCCCTCGCCAGCCAGTACTTCGGCCTATTCACCAACGCCACCTCCCCCACCTTTTTCCCCCTTGTCGCCGTCGAATTCGACACCGGCCAGAACCCTGAATTCAACGACATCGACGACAACCACATCGGCATCGACCTCAACAACATCGAATCCACCTTCTCCACCCCTGCCGGCTACTACAATTCCACCGGGGGGTTCGTGCCGGTGCGTATGCGAACCGGCCAGAATATCCGAGCCTGGATCGATTTTGATGGCCAGAATCTGCTGTTCAACGTAACGGTGGCGCCAATCGGCGTTTCGCGCCCGACGCGGCCTACGCTTTCACATTATGTTCCTACCATAGGTAACTACGTGTCAACTGACATGTACGTTGGGTTTTCAGCTTCCAAAACGAACTGGATCGAGGCGCAGAGGGTTCTGGCATGGAGCTTCAGTGATTCAGGGCAAGCGAGGGAGCTGAACACGACAAACTTACCGGTGTTCGAACCGGAATCGTCGACTTCCTCGCTTTCTGGCGGCGCAATAGCGGGGATTGTTATTGGTTGTGTAGTTTTTGTGGTTATATGCGGTTGTGGTGTTTACTTATGGTGGCGAATCCAGAAAGGGAAAGACGAACAAGACGAGATCGAGGATTGGGAGCTAGAGTACTGGCCACATAGATTCTCGTACGAGGAATTGAGTTCTGCAACAGGGGAATTTGGGAAGGAGCAGCTGTTAGGTTCGGGAGGGTTCGGGAGAGTTCCCAACACCACACGTGTGGTGGGGACGCTGGGTTACTTGGCGCCGGAGCTGGCCACGGTTGCGGCGCCGACGTCCGCGAGTGACGTCTACAGCTATGGAGTGGTACTGTTGGAGGTGGCGTGCGGGAGGCGGCCCATTGAGACTTCGGTGGCAGAGGAGGAGGTGGTGCTCATCGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGCGCGCGTGAGGCTGCCGATGCGAGGATCGAAGGGGAGTACGACGAGGAAGAAATGGAGATGGTTTTGAAGCTTGGCTTGGCTTGTTGCCACCCTGACCCCCAGAGGAGACCCACCATGAAGGAAGTCGTCGCGCTTCTCCTTGGAGAGAATCCGCCGGAGGCTCCCGGAAAAGTCTTGTCCGATTTGGTTCGCGGCGGCGACGATCTCGATGAGGCGGCCCCTTTACAACCCTCCTCCACGCGGGTTTGA


Promoter Sequence:
>Vu_06591::LG1:96776151-96778151(+)
AGAAGAGAAGTTTGAAGGGAAGAGGTAACGAGAAACATGAGTTGAAGAAGCATAACTCTAAGAGGAAAACAAATATGACGAAGAAAGCTCTGTACTTTTATTTTACACTCCTATAAATATAAAAATTATAACTTTACTATTTTTAAATTATACAATTCAGAAATTAAAAATTTCTTTCGAGTTATGCTTTTAAAAAAAAAAGTCAAATTACACAATTTAAAATTAATTAAAAAAGATTAAAAATTTACTTGATAAGACATTTTTAACTTTCGAAAGTAAAAAGATAGTGCATTTGAGAAGTCATGTGAACCGTCCTCTCTACCATCAGTTCAGAAGTTGGAATTTTTATATTGATGGAAGTGCAGAAGAAAAGTACGGAGGTGCAGGAAGAATTTGTCGAAGGAGAGAGGAAGGGAGAAAAAAATGGACCGCTAGCCCATATTAAACTTTGTGTTATTTGACAAGTTATTTGTTTTTATTCTAAGATTTGAGTAGTTAAATTACAGCTTAAAACTCGCTGGATTAATAAACCTCGATAGATATTATATATAAAAAAAATACTTTCATGAAAGTTTTTCTTACAAAATTCATAAATTAATCTTATCAATTATTGGTATGTAGCTATTATGAATGTAAAATATTTTTTTCTCTGGTTCAAAAATTTAAAACTACAATATAGTATTACAAGTTGGTTAAGTATTATTATAAATTAATGACATATCAGTTATTCCCTGTGTGCTAATTTGTGGAGTAAAGGTTTGGGGTTGATGAAAAATCACACCCCAGTACCAACACTATAAATATTGTTGCCTTGTGCAGTTGTAAGTGTTCGCTGTGTTGTAAGATCAACGTTCTCTAAAGCCCAAAATTAAGTGGCTTTCTTCCTGGATCTCCAATTTTTTTTCTGTACCTCTAAATTTTATTGTACCAAATATAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAATTTGTTAACATACATAAATTCTTTTTTTAATTAGTATATTTTAGCAAATGTACATTCTCTTTGGTTATACACCACCCTCGAATTTTTTACATAAATAATACTCGGTCCCTTTTTTTTTTTCGAAACCAGACAGTAGCTTTTATTTCCTCGAATAATACACTTTTTGCTGTACTGATTTTTTATATTCCTGTTAAAAGACATACTAATGAAAAATCATATCTATTCTCCCAAAAAATGAATTATAAACTAACAGGAAAATGGTAGTATTTGGTAAATACAAGCTCCCGTCATCAGACCGCTACAATATCTGCACAAGACTCTGTCACTGTGCGAGACTGCTGCCCGGAGCTCCCCACCACAAGAACCTAACTTTCTACCAAAAGAGTACCGCGTCACCATCATCACCATGTAGACATTATCACGCTACTACCGCAAAATACCATATTTTAGAACTATCCAGGGAGAAAACAAATAAATAACTTTTAAAAAATTCAACTTTTTACGTAAATCATGTGAACCTTTCAATATTTAAACTCAAGAAATATACAAGTTATTGTAAAAATCTAAAATCATGAAACGAAACCCACGTCATCATTCTCAGTAGAGATATGGCAAGTGGACTTTCAAAAAGGCACTATGAAAACAAGAAAAATTCAGAGTACGAATTTATAATTCTGACTGCTGAGGCTACGCAGCGATTACCCTTGCTTGCTTTTCTTTGAGGAACCTTCATCAGTGATCCAGCTCATTGAATTGAGTTTTATAATATTCACTCTTTGTTGAATTATTAACATCAGCCGAAAAGAAAGTCTCATTGACATTTTTTTAAACAATAATAATAGTCAAACAAAAATAACATTCCTCACTTGTTAATATGAGCATTAATTGATATATATTTAAAATCATAACTTGATCCTTAATTGGTTAAAGGAAGAGTTCAAATAAAATCCAACCATACAAGTCCTGGGAAATTCCCAAAAGACACTTGGCCTA


Gene Sequence:
>Vu_06591(+)
ATGTCTCCTTCAAAAATCCTCGTTGCCGGTGAAATACCATATTCCGGCATGTGGTTGGTTATTCTTCTTCTTCACCTCGCTGTCTTTGCGACTCCTTCACTTTGCTTGGACTTCCTATTCAACTCCTTCACCGGCATAACCAACCTCACTTTGGTGAAAGACGCTCGCGTGGACGCATCGGTCATCCGCATGACCAACGACTCCAACCAGTACTCCTATGGACGCGTCTTCTATCCCACAAAAGTTCCCATCACAAAACCTTCTTCCAATTCCTCATCCTCATCCATCACTTCATTCTCAACCTCTTTTGTCTTCTCCGTCTTGCCGCAAATCACTACCAGTCCTGGCTTTGGCCTCGCCTTCGTCCTCTGCAACACCACTGACCCTCCCGGAGCCCTCGCCAGCCAGTACTTCGGCCTATTCACCAACGCCACCTCCCCCACCTTTTTCCCCCTTGTCGCCGTCGAATTCGACACCGGCCAGAACCCTGAATTCAACGACATCGACGACAACCACATCGGCATCGACCTCAACAACATCGAATCCACCTTCTCCACCCCTGCCGGCTACTACAATTCCACCGGGGGGTTCGTGCCGGTGCGTATGCGAACCGGCCAGAATATCCGAGCCTGGATCGATTTTGATGGCCAGAATCTGCTGTTCAACGTAACGGTGGCGCCAATCGGCGTTTCGCGCCCGACGCGGCCTACGCTTTCACATTATGTTCCTACCATAGGTAACTACGTGTCAACTGACATGTACGTTGGGTTTTCAGCTTCCAAAACGAACTGGATCGAGGCGCAGAGGGTTCTGGCATGGAGCTTCAGTGATTCAGGGCAAGCGAGGGAGCTGAACACGACAAACTTACCGGTGTTCGAACCGGAATCGTCGACTTCCTCGCTTTCTGGCGGCGCAATAGCGGGGATTGTTATTGGTTGTGTAGTTTTTGTGGTTATATGCGGTTGTGGTGTTTACTTATGGTGGCGAATCCAGAAAGGGAAAGACGAACAAGACGAGATCGAGGATTGGGAGCTAGAGTACTGGCCACATAGATTCTCGTACGAGGAATTGAGTTCTGCAACAGGGGAATTTGGGAAGGAGCAGCTGTTAGGTTCGGGAGGGTTCGGGAGAGTGTACAAAGGGACGTTGCCGAACAAGACACAGATTGCAGTGAAGTGTGTGAACCACGATTCGAAGCAAGGGCTGCGGGAATTCATGGCGGAGATAGAGAGTATGGGGAGGCTTCAGCACAAGAACTTGGTTCAAATGCGAGGGTGGTGTAGAAAGGGTAACGAGCTTATGCTTGTTTATGATTACATGCCTAATGGGAGTCTCAACAGGTGGGTTTTCGATCGCCCCGAGAAGCTTCTAGGGTGGGAGCAACGCCGTCGTATCCTTGTCGACGTGGCGGAGGGGCTTAACTACCTTCACCATGGTTGGGATCAGGTCGTTATTCACCGAGATATTAAGTCCAGTAACATATTATTGGACGCCGACATGCGAGGGAGACTCGGGGACTTTGGTTTGGCCAAGCTTTACACGCACGGGGAGGTTCCCAACACCACACGTGTGGTGGGGACGCTGGGTTACTTGGCGCCGGAGCTGGCCACGGTTGCGGCGCCGACGTCCGCGAGTGACGTCTACAGCTATGGAGTGGTACTGTTGGAGGTGGCGTGCGGGAGGCGGCCCATTGAGACTTCGGTGGCAGAGGAGGAGGTGGTGCTCATCGATTGGGTGAGGGAGTTGTACGCGAAGGGGTGCGCGCGTGAGGCTGCCGATGCGAGGATCGAAGGGGAGTACGACGAGGAAGAAATGGAGATGGTTTTGAAGCTTGGCTTGGCTTGTTGCCACCCTGACCCCCAGAGGAGACCCACCATGAAGGAAGTCGTCGCGCTTCTCCTTGGAGAGAATCCGCCGGAGGCTCCCGGAAAAGTCTTGTCCGATTTGGTTCGCGGCGGCGACGATCTCGATGAGGCGGCCCCTTTACAACCCTCCTCCACGCGGGTTTGA