Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06644 LG1 97339090 97341448 PREDICTED: serine/threonine-protein kinase HT1-like
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Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, cellular response to carbon dioxide, protein autophosphorylation, protein autophosphorylation, regulation of stomatal closure, protein autophosphorylation, protein autophosphorylation, cellular response to carbon dioxide, protein phosphorylation, regulation of stomatal movement, protein autophosphorylation, cellular response to carbon dioxide, cellular response to carbon dioxide, protein autophosphorylation, protein phosphorylation, protein phosphorylation, protein autophosphorylation, protein autophosphorylation, regulation of stomatal movement, regulation of stomatal movement, signal transduction, regulation of stomatal movement, regulation of response to red or far red light, cellular response to carbon dioxide, cellular response to carbon dioxide, cellular response to carbon dioxide, cellular response to carbon dioxide
Cellular Component   is active in   cytoplasm
Cellular Component   located in   plasma membrane
Molecular Function   enables   protein binding, protein kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein binding, protein serine/threonine/tyrosine kinase activity, protein kinase activity, protein kinase activity, protein binding, protein binding, transmembrane receptor protein tyrosine kinase activity, protein serine/threonine/tyrosine kinase activity, protein kinase activity, protein binding, protein serine/threonine/tyrosine kinase activity, protein kinase activity, protein kinase activity, kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
A/C 97339390 intron_variant
C/G 97339391 intron_variant
T/C 97339400 intron_variant
A/G 97339403 intron_variant
A/T 97339490 intron_variant
A/G 97339596 intron_variant
C/G 97339606 intron_variant
G/C 97339644 intron_variant
C/T 97339903 intron_variant
C/T 97340162 synonymous_variant p.Leu191Leu
A/T 97340386 intron_variant
T/C 97340387 intron_variant
A/T 97340388 intron_variant
C/T 97340405 intron_variant
A/G 97340427 intron_variant
G/A 97340677 intron_variant
C/A 97340719 intron_variant
G/A 97340855 intron_variant
G/T 97340987 intron_variant
C/T 97340994 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06644.1
MKNLYWFKEISNNVRSGRRLSLGEYKRAVSWSKYLISSGAAIKGEAEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEDLAVSLEQQFTSEVNLLFRLRHPNIITFVAACKKPPVFCIITEYLGGGSLRKYLIQEGPHSVPHNVVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDLCAKVADFGISCLESQTGSAKGFTGTYRWMAPEMIREKRHTKKVDVYSFAIVLWELLTGLTPFDNMTPEQAAYAATHKNERPPLPCECPRAFSHLINRCWSSNPDKRPHFDEIVAILESYSEALEEDPQFLTTYKPRPNNLILRCLPKCNTTANLSASTKP*


CDS Sequence:
>Vu_06644.1
ATGAAGAACTTGTACTGGTTTAAAGAAATTTCTAACAACGTGAGATCAGGGAGAAGGCTTTCACTTGGGGAGTATAAGCGAGCGGTGTCATGGTCCAAGTATTTGATCTCTTCGGGGGCAGCCATAAAGGGAGAGGCTGAAGAAGAATGGAGTGCTGATCTGTCTCAGTTGTTCATTGGGTCCAAGTTTGCTTCTGGGAGGCATAGCAGGATCTACAGAGGCATCTACAAGCACATGGACGTTGCAATTAAGCTGGTGAGTCAACCGGAGGAGGATGAGGACTTAGCCGTTTCGCTAGAGCAGCAATTCACTTCTGAGGTTAATTTGCTCTTTCGATTGCGCCATCCAAATATCATCACCTTTGTTGCAGCTTGCAAGAAACCTCCTGTGTTCTGCATTATTACTGAATATTTGGGCGGGGGTTCGTTGAGAAAATACTTGATTCAGGAAGGACCACATTCGGTTCCTCACAACGTTGTTCTGAAATTAGCCTTAGACATTGCTCGGGGAATGCAATATCTTCATTCTCAGGGAATACTTCACAGGGATCTGAAATCAGAAAACCTGCTGTTGGGGGAAGATTTGTGCGCAAAAGTAGCAGATTTTGGGATCTCATGCTTGGAATCTCAGACTGGTAGTGCAAAAGGATTCACTGGAACATACCGTTGGATGGCACCTGAAATGATCAGAGAAAAGCGTCACACCAAAAAAGTAGATGTCTATAGTTTCGCCATAGTTCTATGGGAACTCCTAACAGGATTGACCCCATTTGACAACATGACACCAGAGCAGGCAGCATATGCAGCCACTCACAAGAATGAAAGGCCTCCGTTACCATGTGAGTGTCCACGGGCATTTAGTCATCTGATAAACAGATGCTGGTCAAGCAATCCAGATAAAAGACCACATTTTGATGAGATAGTTGCGATTTTGGAGAGCTATAGTGAAGCACTTGAGGAGGATCCACAGTTTTTAACCACTTACAAACCACGTCCTAATAATCTTATTCTCAGATGCTTACCCAAATGTAATACTACTGCCAATCTATCTGCTTCTACCAAACCTTAA


Promoter Sequence:
>Vu_06644::LG1:97341448-97343448(-)
TGTATTTCAATTTGAACAATCAATTTAATACGACTTGATCGATGTGTACCGATCAATACATATACAATCCAATACCGATTAGGATCTCAATACTTATACATCAATTATCAACCTTTGTATCATATAGAAATGGTCAAAGCACTTATCTCTTAGTCTCGTGCAGAGGTTATTATTTCCCTCACAACAATAATTTCAAGAAATTGAGACTAACAACAATTTATAAATATTTTTCCGTCCTAATCAATTCTTAACAATTATGAATCGCAAAACTTTCATCACCAATTCTTAACACAGTTATTTAAGTAACAGAGACTTGGACGTGAAATCATTAATTGAGAGGAAGCAAGCTCCCAAATTAATCCATGTGCTGAATTCATTAATTTTATTTAATTTTTTGCTGATTTAAATTCCTACTATGTTATTTATAAAAAAAAATATCAAATAGATTATTATCTTACTAATTTCCCATAATAAATGGAAAATTGATTGTTTATGAAAAATGACGATTTAATTATGAAAATTCCATTAATTAATTATTAGTGAGAATTAAAGCAATTTTTTATGAAAGAATTTCAAATTTCAACTGATTAATTGTTTTATTGATTAACTTTTTCAACAACTATTTACACAAAATATTGACCCATCAATTTGTTTATTATTATTTTTTTCGGTTATAAACAGTATGGGAAGAATACTTGGTTAGTATGAAATGATATAATAATGAGCTCTTTACGTGAGCAAGTTTATCAAATTATCATATCATGAGAGTTGCCAAAAATCTTAGTATTGTGAAATTTGTTAGAAAGTTTACATTAGTTATCGAAAGCATGCAATTTGAATGTTGCTTTAGTTTCTGTCTTATTTATTACTTGTTGACTAAAAAAAGGGACTTATTGCATGTTTACTATGCAGCCTAATCTTAAAAAAATTCTTATCTTGGTCATAATTGCTTTGGCCATTAACCCTTGAGAGAAAAGATTCTCAACAATTAAGAAGAAACTGTTAATGGTTTTAAAAACATAAATAAACAAACTGTATATACCATATAGGGGTCCATAACGGTAAAGATAAAAATACTACAAGTCTGGTAAAATACGTGGAGAAGAAATGATTCGATTCTTAGGAATGATATTGGTGAGTTTGACGGAGCATACTTAATTTTGTTGATGAGTGTAAACGTTTTCGAAAAAGGGATCCGTAATGGTTGAAGTTAAGAGATTTGATAAAAGTGCAGAGATTGAGTGTGAAAGTTATTATTTGAAAATTGATTTGGTAAGGTTGGTTGGTTGTGAAGAGAAATGAATGATGGTAAAAAGAAAGAAAGAAGTACTTGGAATGAGAATGATGGAAATGCAAGGTCTGGCACATAGCACATGGTGGTGGCTAGAAAACAAAGAAAGCAATAAATGGAAGGGGAGAAGAGTGTGACAAATAAATTGAAGGTTAGCGAATGAATGGCAGTGGTGATAATGCGGTGGGAAACACAGGTTCAAAGTGGAAAGAAAAAAGAATTGGAAAGGGGTGAGGTAGGGGTCATCATCAACCTGACCCCGTTTGTCTCCTCACAAGTATATCTTCGCACGTTACCAACGTAGATGCTAATGTCAGTCCCTGTGTTTCCAGACACAAAAAAAAAAATAAAAATACCATCTTTCATCTCCATTTCCTCTTCTTTCACTGCACCATCCAACACTTGAGCTCCGATTCCTCTCTCTTCCTCACTCTTCTCTCTCACTAAAATCCCCTTCATGCCTCACCCTTTTTCCTTTCTTTTCTTTCATCTATTGTGGTTTGGAGTTGGTTTCTTTTTATTTGTTCTTCTTTTCTCCAGCTGCGTAAATGGTGATGATGATTCAAAATGTAGGTAGCGTAGGGAATTAGTTTAAGCTATGAAAAACAAGTTTCTCCAAACTGGGTATTCCTCACTATTTCTAAAAACAAAAACTTTGGACTAGCTTTTGGAATCTGCATTGGGTTCCCATAAGGGTTAAGCGGGAAGC


Gene Sequence:
>Vu_06644(-)
ATGAAGAACTTGTACTGGTTTAAAGAAATTTCTAACAACGTGAGATCAGGGAGAAGGCTTTCACTTGGGGAGTATAAGCGAGCGGTGTCATGGTCCAAGTATTTGATCTCTTCGGGGGCAGCCATAAAGGGAGAGGCTGAAGAAGAATGGAGTGCTGATCTGTCTCAGTTGTTCATTGGGTCCAAGTTTGCTTCTGGGAGGCATAGCAGGATCTACAGAGGCATCTACAAGCACATGGACGTTGCAATTAAGCTGGTGAGTCAACCGGAGGAGGATGAGGACTTAGCCGTTTCGCTAGAGCAGCAATTCACTTCTGAGGTTAATTTGCTCTTTCGATTGCGCCATCCAAATATCATCACCGTGAGTTCTCTTTCTTCAACCCTTTATCTCTGTGTCTGCATGGAACATAATAACTTTGATCCTCATTCCTCACTCTTAATGTTCTTTCATCAGTGTTATTCCCTTTACAAGTTTTTTCTCAGTGATTAAAAGAATATATAACATTTCCCTCCCTCACCACCCTTTTGTCTGGTTCAGAGGTGAAGTATTGCGAGATACAGTTATAGATATATAAAATCGTGTCTACGCCTAACCACTCTATGATGTGGTGGTACAGTGGTACTCCTTCTCTTTCTTGCTAATCGAAAAATGACACGTCATTGACTTCTCTCAGGTTGTTAGTGTGTGTTTTTTTGTGGTTGTTGTAGAAATCCTAGTTTTTAATTGGAGGGAAATAAAAAGAGACAAATAAATGGGGACAGGTGATTTGAACACAGAGGGTGTCGTGTCTTCATCTGAAGACTTTTGGTGTAACGTGAAATTTTGTGAAAAATCGAATCAATTATTAGTAAAAGGAAATTATATGATTTTACTGCATGTACCGAGCAAAAGGTGTTTCAGCAGATGAATTCATTTATTTGAAGTAGATATGTGGCATTGTGGCCTATCACACGAATGGTAGGCTAATGTAAGAGTTACTTTTTAACAGAGAAGACAAGGCTTTTGTGTGAAAGTTTGCAACTGGTGAATATAATAAAGAAACTGATTAAAAGATGATCCGTATTGGTTATGCAGTTTGTTGCAGCTTGCAAGAAACCTCCTGTGTTCTGCATTATTACTGAATATTTGGGCGGGGGTTCGTTGAGAAAATACTTGATTCAGGAAGGACCACATTCGGTTCCTCACAACGTTGTTCTGAAATTAGCCTTAGACATTGCTCGGGGAATGCAATATCTTCATTCTCAGGGAATACTTCACAGGGATCTGAAATCAGAAAACCTGCTGTTGGGGGAAGATTTGTGCGCAAAAGTAGCAGATTTTGGGATCTCATGCTTGGAATCTCAGACTGGTAGTGCAAAAGGATTCACTGGAACATACCGTTGGATGGCACCTGAAATGATCAGAGAAAAGCGTCACACCAAAAAAGTAGATGTCTATAGTTTCGCCATAGTTCTATGGGAACTCCTAACAGGATTGACCCCATTTGACAACATGACACCAGAGCAGGCAGCATATGCAGCCACTCACAAGGTCTGTTACTGTACTGACACATTATTCTTATGTAACTTATTTTTATTTGCATAAGGAGTGATGATAATTAAGGTGAAATTAATTAATGGCATGTTTGGATGTTCAATTCTACTAGCTAGAGCAATTAAAGTAGGGACCTTTTCATATGTCCCCAAATCCTTCTGGATATGATGATATGAACTTTACAGAGCATGTGGCATGCCTACCATACACCCTTGCTTATCAAAGCAAGACACCTCATCGACAATATTATATTACCCAGAGATAGACACTTCTATATTATGCTTTACAACATTCAAGATTCGGTATCTGGTATCAAAATTTATCACAGACAATCATTGGTACCACCTCTGCCCTTTCACCCACATGCATCAAAATCAACTTACAGATTCGATCAACTGCTTATGTTTTGGACCAATGTAAGGTTTTCACGTTCACTGTTTTCTCACATGTCACACCACATCCTTTGGGTTCACATTGAACTACTTTTATGCATTGAACAAATGATTCTGCATTGAAATATTTTTGTGTAGTTTTGCGGTGAATGAAGTATCTTGTTTTTTTGAATTTGGTGCAGAATGAAAGGCCTCCGTTACCATGTGAGTGTCCACGGGCATTTAGTCATCTGATAAACAGATGCTGGTCAAGCAATCCAGATAAAAGACCACATTTTGATGAGATAGTTGCGATTTTGGAGAGCTATAGTGAAGCACTTGAGGAGGATCCACAGTTTTTAACCACTTACAAACCACGTCCTAATAATCTTATTCTCAGATGCTTACCCAAATGTAATACTACTGCCAATCTATCTGCTTCTACCAAACCTTAA