Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06728 LG1 98285816 98289631 PREDICTED: probable WRKY transcription factor 61
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   organic substance catabolic process, defense response to fungus, defense response to fungus, organic substance catabolic process, regulation of transcription, DNA-templated, defense response to bacterium, defense response to fungus, response to salicylic acid, defense response to bacterium, regulation of transcription, DNA-templated, defense response to bacterium, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
C/T 98285939 missense_variant p.His24Tyr
T/A 98286415 intron_variant
T/C 98286422 intron_variant
T/C 98286485 intron_variant
A/T 98286764 intron_variant
G/T 98287122 intron_variant
C/T 98287227 intron_variant
T/G 98287552 intron_variant
G/A 98287622 missense_variant p.Asp55Asn
A/C 98287623 missense_variant p.Asp55Ala
C/T 98287722 splice_region_variant&intron_variant
C/T 98287826 missense_variant p.Arg93Trp
C/T 98288026 synonymous_variant p.Leu159Leu
A/T 98288159 missense_variant p.Ile204Phe
A/T 98288162 missense_variant p.Arg205Trp
C/T 98288303 intron_variant
A/G 98288373 synonymous_variant p.Gly249Gly
T/A 98288379 synonymous_variant p.Pro251Pro
C/T 98288382 synonymous_variant p.Cys252Cys
G/A 98288759 synonymous_variant p.Arg345Arg
T/A 98288901 missense_variant p.Ser393Thr
A/T 98288937 missense_variant p.Ile405Phe
T/C 98288938 missense_variant p.Ile405Thr
G/A 98289213 missense_variant p.Gly497Ser
G/A 98289216 missense_variant p.Val498Ile
C/G 98289298 missense_variant p.Ala525Gly
G/A 98289398 synonymous_variant p.Thr558Thr
A/G 98289401 synonymous_variant p.Lys559Lys
T/C 98289405 synonymous_variant p.Leu561Leu
A/G 98289495 missense_variant p.Thr591Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06728.1
MELASERSGDGGGGLKEENRTDEHTVADDEDGPRRQEIILEEAPIEEAGPSTSADKKEEVDDQLESTKSEMGVVREENERLKRSLHKIMNEYRTLEMQFQDILKQGTKRKNGNEEDTVEESDLVSLSLGRVPSNQRNEEKTKVYKALKDDEGFNQELTLGLECKSKSGSTTEALPNPSPENSSEVRKEEAGETWPPSKDTQKAIRDTEDEVAQQNPMKKPRVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTIAPSCPVRKQVQRCVDDMSILITTYEGTHNHTLPPSATAMASTTSAAASMLLSGSSTSLSASAPSTTATNLHGLNFYLSDGAKPRQLYLSNPALSSSPSHPTITLDLTSHPASSSSSPFVRFASNYNQPRYPSSSSLSFSTSSEINALSWSNGFLTNNNTIQPTYNSRNILGNVNFGRQQVENIYQSYLQKNNSNIPSVPQGGVPADTISAATKVITADPTFQSALAAALTSFIGGGVRGNQGGNSVGESPSLGQNLKWGEVFAASNNSSSTLSCSTSKVNGCASSFLNKTPANNTQTKSLVFLPPSSLPFSTPKSASASASASPADNSDTTN*


CDS Sequence:
>Vu_06728.1
ATGGAGCTTGCTTCCGAGAGATCTGGTGACGGAGGAGGTGGACTCAAGGAAGAAAACAGAACTGATGAGCATACTGTTGCTGATGATGAAGATGGTCCTCGTAGACAAGAAATTATTCTAGAGGAAGCACCCATAGAGGAGGCTGGACCTAGCACATCAGCAGACAAAAAGGAAGAGGTTGATGATCAACTTGAGAGCACGAAAAGTGAAATGGGTGTGGTGAGAGAAGAAAATGAACGGTTAAAGAGGTCTCTGCACAAAATAATGAATGAGTATCGGACACTGGAAATGCAATTTCAAGACATACTTAAGCAAGGGACGAAAAGGAAAAACGGTAACGAAGAAGACACAGTAGAGGAATCGGATCTAGTTTCTCTGAGCCTAGGAAGAGTTCCGAGCAATCAAAGAAACGAAGAGAAAACAAAGGTTTATAAGGCATTGAAGGATGATGAAGGGTTTAACCAAGAGTTGACTCTCGGACTAGAGTGCAAATCAAAGTCGGGAAGCACAACTGAAGCTTTGCCTAATCCAAGCCCAGAAAACAGTTCTGAAGTTCGAAAGGAAGAAGCTGGGGAAACTTGGCCACCCAGTAAGGACACACAGAAGGCAATTAGGGACACAGAAGATGAAGTTGCTCAGCAAAACCCTATGAAGAAGCCACGAGTTTGCGTTAGAGCAAGATGTGACACTCCAACAATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATCGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACCATTGCACCATCATGTCCAGTCAGAAAACAGGTGCAAAGATGTGTCGATGACATGTCCATTTTAATTACGACATATGAAGGGACCCACAACCACACTCTTCCACCTTCGGCTACTGCCATGGCATCCACAACTTCTGCAGCAGCCTCCATGCTTCTTTCTGGTTCTTCAACCTCTCTCTCTGCCTCAGCACCGTCAACAACAGCAACCAATCTCCACGGCCTCAATTTCTATCTATCAGATGGTGCAAAACCAAGGCAATTATACCTGTCAAACCCTGCACTGTCGTCTTCACCTTCACATCCAACCATCACTCTCGACCTCACTTCACACCCAGCTTCTTCTTCCTCATCACCCTTCGTTAGATTCGCTTCAAACTACAACCAACCCAGATACCCCTCTTCCTCAAGCCTAAGCTTCAGTACTTCCTCAGAAATCAACGCCTTGTCTTGGAGCAACGGCTTCCTTACCAATAATAATACTATTCAACCTACATACAATAGCAGGAACATACTTGGGAATGTAAACTTTGGGAGGCAACAAGTGGAAAATATATACCAATCCTATCTGCAAAAGAACAACAGCAATATTCCAAGCGTTCCTCAAGGTGGTGTACCGGCTGATACTATATCTGCAGCAACGAAAGTGATCACGGCAGACCCCACTTTTCAATCAGCTTTGGCAGCAGCCCTCACTTCGTTTATTGGTGGCGGTGTTCGAGGAAATCAAGGAGGTAACAGTGTTGGTGAAAGTCCAAGTTTGGGTCAGAACTTGAAGTGGGGTGAGGTGTTTGCAGCGTCTAATAATTCATCTTCTACCTTGTCTTGTTCAACTTCGAAAGTCAATGGTTGTGCATCGAGCTTCTTGAACAAAACGCCAGCGAATAATACACAGACGAAAAGTTTGGTGTTTCTACCGCCGTCGTCTTTGCCGTTTTCTACCCCCAAAAGTGCATCTGCGTCTGCATCTGCATCTCCGGCTGATAATAGCGACACCACCAATTAA


Promoter Sequence:
>Vu_06728::LG1:98283816-98285816(+)
TTATGTTCAATCACATCACTACTATTAAGAAAAAGAAACCTATAAGAGACACTTTGTTCAACATAACCTAAGAACATACAATAAGAGGTTTTAGAGTCTATTTTCTTTTTCTTAAGATCGAATAACATTACCTTAGCTAGACACCCCCACACTCTTATTTAAGATTAGGTTGATAACCTCTCCATAACTCATAGAGAGTTTTACCAGTTTTCTTACGAGATATCCTATTTTGTAAAAACTATGTAGTAAGAAAGACTTCTTCCCGAAGGTTATCAGGTACACTAAAATAAATAAGAATGACATTCATCATTTCCTTAAGAATTCTATTATTTCTCTCAACTATTTTATCACACTCAAGTGAATTTGATGAGATTACTTCATGGATAATACTTTCTCTAACACAATATTCATTAAACAATACATATTTCACCACCTCTATCTTTGATAGTATATTTGAGAATCAATAAATTGCAAATGTCTTTCACTTTTTTATAGGTACAATACACATCAAATAAGTCATTAGACTGCACTAAGTAAAGTGTGTCGGCATACCTTGTTTGCATGAATCAAATCTTCAACTTGTTTTGAAGGGATATTGGAGTCGAGTTTTGGAGGTGAGAGAGTAGTAGCAACTCCATACATGTTTAATAAGATAGACACACGTTCTTGCTAGCGTCGAAAGTTCTGTTTAGAGAAAACCTTGATTCAGGAAAAATTTCATAAAAACGGTCTCTGAAAATAATGTTTTGATTCTTCATATTTGGATTGTTAATGTTCACCATAAGTCCTTAAGATTGTTGTAAATATTAACAAAATCATAAACAAAAGACTTTCTAAAGTGTATAGATTCATTGTCCTTAAAACTTATATTTGGTGTGTTACACAAGTTTTCCAAGATATAACTGAAACTTTTCAAAAACATTTGAAGATATCAAACTAATGAAGAACTCTAAATAAGAATAAATAACTAAATCCATAATAATATAAAAAAGAAATGAGAAATAAAGAGAATGAGATAATCAAAGTTTTGTGTGAATGTCTTCAAAAGAGAAAAAAGAATATATACCTTCTTTGTCATGCAGAGACGACACCATACTTTGCTGCACAAACTCGCAACTTAACCTTCTCATGTTCTAGACATTGTTGTTACATTGTGTACACCACAAGAAATCTTGAGGTGAAAATTTGAATATTTCACAAAGTATTGTTCAAAGAAATCGCCCGTCGCCATGATAGTTTCATCAACCATTCCTTTAATTACCTTCGGAGTTGTTACGACAACCCTAATACAAATATATATGGCTAATTTATGTCCACGAACAAGTTGGTAGAAGTTTAAAACCTTATAATATGAAGCTATGTCATCACTACATCAGCATGAAACAATGAAGAATATATTCTCACAACCCTACTTTGACCCTCGCCTTGTCCCACTTCTGAATTTTCTTTTTCCTATATATCTAGATGGGTGTAGTTAGGTCCATTGCAAAATGGGGGCAGTGATTTATTGTAATACCTACACCCAATTCTAAAATTTACACTCATCATTTGTTCATGCCTATAACTTTTCTTAAAGAAAATGAACGAGATAAAAATATCTTCAAATCTTATATTATTAATTATATCTTTAACTGGTGTGTGTGTATACGCCAAAGGCAAGGAAGTCGCATTAGATTAAAATACTTGACTCAAAGAGAAGACCACGAAATTAATTAATTAAAATAATATATATAGATATAGATACACAGGAAATTAAGAGAGGCTCCGGTCACTGATGGTGGCAAAAATTTTGACCTGAAAACCGTTGTTGTCGACGTTTGGGCCATGTGACTTTACAAGACGTACGAAACTTCAAAGATGCCACCAATCACTAATTTTCTTCCTTTTTTTCGTTTTAATTAGTCAATTTTTTTCATGTGTGTAATACTTCATGCAGGCCCTTTTTTCTCCAGTGTCTATGCTAATAATATAAAAGGAAGGGCTTTGTTGGAGGACCCAGA


Gene Sequence:
>Vu_06728(+)
AAGAAAGAAACAGATCAAGGAGCAAGGGCTTGCGAAGAACCAAAATTTCCACAAATGGAGCTTGCTTCCGAGAGATCTGGTGACGGAGGAGGTGGACTCAAGGAAGAAAACAGAACTGATGAGCATACTGTTGCTGATGATGAAGATGGTCCTCGTAGACAAGAAATTATTCTAGAGGTGAAGATTAATATTCTCTTCCTAATTAACATCCATCTATTTAAGAACCATCTTTTTCATCTCTTAAATCACAAAAACATCATTATTAAATCATAAATTTTGTTTTTGTTTTTTAAGCATGCATCTCATTTGTGTTATAGTTCATGTAGGATATTCTTTTCTCTCTAGAAATCCTTCCAGACTTTCATAAATGACCAACCCAGAAATTAAAAGAATGATCTTGTTTAATAAAGAAACACAGTAATTTGTTCGATACTTTGATAATTTTAATGTTGATTAACTTCTCCCCTTCCTTACAGTTTTCCAGAATTGAAACATAGTCTTTAATTTAATTTGGTCGGTCTTCTGCAAGCTGTTTTCAATCCTCACAAGAAATTCAATTCGATTGTCAGGGCATAGCTTTTCCCGAAAACAGTTTCGGATTCTCTTTTTTTGTCGCATCATCACCACCAGCATCCTAAAATCACAGCCAATTAACCTTTATGGATTTTGTTTGGTAAAATCCATGGTAAATATATATATATATATATATATATATATATATATATATATATATATATATATTTATTTATCTATCTATCTGTTAACGATAAAGAAAGGAAAATTGGGTGTATATCTACAACTTGAACAATAGTACATGAAAGTAGTTGAATTAGTCAGCTCGAACATAAGATTTATATTCAAAAGAAAACGTCAATATTAACGTCTTTAGATTAAGTTGTAAGGAAACTAATTTCCTGTAAACAAGATTTCAAATACGAATTTTCTGAAAAAAGAAAAGTGAAAAGACTTCATCCTAGTCGGTGCAAATTAATCAAGAAGTAATTTGAATGATGAGTTTGTACATAAAATCTTAAACCAATTTTTTCTTCTTTCTAAAGAAATCTTAAACCAAAAGTAAAAAAAAAAAAAGCTTAGAAACTGATACGAATGTCCAATCATGCATGATCAATGGCCTTTGCGAAAATTAATGAAATAACACTGTATTCTATTTGGCAAGCATTACTAAAAGGGTTAGTTCAATAATTAATGACCTCTGGTAAGAGTTGACCAACGCATGTGCCTGAAAAGAAAATTAATTATATTTTCAACATGATATAATTCATCCACGTGCAAGTTAAAATCAACAGATTCTAACCGGTCCAAATAAGAACGGGAAAGATTCTAGATGAGTTTCTTATAGTCACATAGTATTTATTTCATTGAATACAAATAGGATCGTTCCATTCTATTACTGTACATAACAATTCTAATTTTCCTTTGTCCTTATTAGTTTCTAAAATCACAAGGTAGTTGTTTATCTTTAAGAACGTTGATCAATCTTCTTTAATTGGAATATATGACATATATAACCTCGTTTTATATGTAAACAGTTCGTTTCAATGAATAAAAAGAATTTGAATTATTCAATAGTAATCTAATACATTTATATAAATTTTTTAAAAGTAAACCATTTAATATTTGGCATTTTAAAAACAATAGTGTATAAAAGTTAGGGGAAGTATAAAATGCATCCAAAAACTATACAGTTGGGAAAAGCTGAATTGTATAGTTGCATATTAATTTGATGATTATTACTGTGCGATGCAGGAAGCACCCATAGAGGAGGCTGGACCTAGCACATCAGCAGACAAAAAGGAAGAGGTTTTATAAATTTATAATGATACAATGAGTTCTTATTTATTTCATTTCCACGGTTCAGGAAGTATTATAAGAATATATATGTATACGCAGGTTGATGATCAACTTGAGAGCACGAAAAGTGAAATGGGTGTGGTGAGAGAAGAAAATGAACGGTTAAAGAGGTCTCTGCACAAAATAATGAATGAGTATCGGACACTGGAAATGCAATTTCAAGACATACTTAAGCAAGGGACGAAAAGGAAAAACGGTAACGAAGAAGACACAGTAGAGGAATCGGATCTAGTTTCTCTGAGCCTAGGAAGAGTTCCGAGCAATCAAAGAAACGAAGAGAAAACAAAGGTTTATAAGGCATTGAAGGATGATGAAGGGTTTAACCAAGAGTTGACTCTCGGACTAGAGTGCAAATCAAAGTCGGGAAGCACAACTGAAGCTTTGCCTAATCCAAGCCCAGAAAACAGTTCTGAAGTTCGAAAGGAAGAAGCTGGGGAAACTTGGCCACCCAGTAAGGACACACAGAAGGCAATTAGGGACACAGAAGATGAAGTTGCTCAGCAAAACCCTATGAAGAAGCCACGAGTTTGCGTTAGAGCAAGATGTGACACTCCAACAGTAAATCTCTATTCTCTCACCTCCTTCTATTTACCCTCTTTTCTCAACTATCATATTCATATTTACTGTTCACACAGATGAATGATGGATGCCAATGGAGGAAATATGGACAGAAGATCGCAAAGGGAAATCCTTGCCCTCGAGCTTACTATCGTTGCACCATTGCACCATCATGTCCAGTCAGAAAACAGGTATCTGTATATCTTTATCTGTTTCTATATATCACTATCAAGAATTTCCATTTACTTCAAAGCAAAATGATTCCAGACATCGTGTGTACATATTTCAGGTGCAAAGATGTGTCGATGACATGTCCATTTTAATTACGACATATGAAGGGACCCACAACCACACTCTTCCACCTTCGGCTACTGCCATGGCATCCACAACTTCTGCAGCAGCCTCCATGCTTCTTTCTGGTTCTTCAACCTCTCTCTCTGCCTCAGCACCGTCAACAACAGCAACCAATCTCCACGGCCTCAATTTCTATCTATCAGATGGTGCAAAACCAAGGCAATTATACCTGTCAAACCCTGCACTGTCGTCTTCACCTTCACATCCAACCATCACTCTCGACCTCACTTCACACCCAGCTTCTTCTTCCTCATCACCCTTCGTTAGATTCGCTTCAAACTACAACCAACCCAGATACCCCTCTTCCTCAAGCCTAAGCTTCAGTACTTCCTCAGAAATCAACGCCTTGTCTTGGAGCAACGGCTTCCTTACCAATAATAATACTATTCAACCTACATACAATAGCAGGAACATACTTGGGAATGTAAACTTTGGGAGGCAACAAGTGGAAAATATATACCAATCCTATCTGCAAAAGAACAACAGCAATATTCCAAGCGTTCCTCAAGGTGGTGTACCGGCTGATACTATATCTGCAGCAACGAAAGTGATCACGGCAGACCCCACTTTTCAATCAGCTTTGGCAGCAGCCCTCACTTCGTTTATTGGTGGCGGTGTTCGAGGAAATCAAGGAGGTAACAGTGTTGGTGAAAGTCCAAGTTTGGGTCAGAACTTGAAGTGGGGTGAGGTGTTTGCAGCGTCTAATAATTCATCTTCTACCTTGTCTTGTTCAACTTCGAAAGTCAATGGTTGTGCATCGAGCTTCTTGAACAAAACGCCAGCGAATAATACACAGACGAAAAGTTTGGTGTTTCTACCGCCGTCGTCTTTGCCGTTTTCTACCCCCAAAAGTGCATCTGCGTCTGCATCTGCATCTCCGGCTGATAATAGCGACACCACCAATTAAATAATTGGTGATTTTTCTATGACCAGCTACTGTATTTTTTTCTTGGATTATCGATGTAATTAATTAAGATATGCTAAGTAAAATTCAGCACAAAACACGTAAATAAATTATGAACATATTTACTC