Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06743 LG1 98428239 98429435 PREDICTED: transcription factor TCP14
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of defense response, response to gibberellin, response to cytokinin, response to cytokinin, inflorescence development, inflorescence development, regulation of transcription, DNA-templated, inflorescence development, regulation of seed germination, inflorescence development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, response to gibberellin, response to abscisic acid, response to abscisic acid, regulation of seed germination
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, sequence-specific DNA binding, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity, protein binding, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
C/T 98428644 synonymous_variant p.Thr264Thr
A/T 98429254 missense_variant p.Leu61His
G/A 98429274 synonymous_variant p.Asn54Asn
G/T 98429319 synonymous_variant p.Ser39Ser
C/T 98429334 synonymous_variant p.Ser34Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06743.1
MEGGDDLHHHHHHHHRQNFPFQLLEKKEDQEAASCSTSSPYPSLAISAEPTTSNSTRSNQLAAASDPPNRQKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRTLFPGIALSSDTNPTNTSTLLNFQSNNLNTSMLQAKPEAPSTLDLSDTSAEESTLGRKRRPTEQDLSSSSQHQMGSYLLQSSAGTIPASHAANIWMVANSNTNQVMSGDPIWTFPPVNNSALYRGTMSSGLHFMNFPTPMALLPSQQLGSSGIGAVGGSSNNNSNNNGNNNMNEGHLSMLAGLSPYRPVIGVSESQASGSQSHRGGAADDRHDTTSHHS*


CDS Sequence:
>Vu_06743.1
ATGGAAGGAGGCGACGATCTCCACCATCATCACCACCACCACCACCGTCAGAACTTCCCATTCCAGCTCCTGGAGAAGAAAGAAGACCAAGAAGCGGCCTCGTGCTCCACCTCCTCCCCCTACCCTTCCCTAGCAATCTCCGCGGAACCCACCACGTCCAACTCCACCCGATCCAACCAGCTCGCGGCGGCGTCGGACCCTCCAAACAGACAAAAGCCCCCACCCAAACGCACGTCGACCAAGGACCGGCACACGAAGGTGGACGGTCGTGGCCGCCGCATCCGAATGCCCGCTCTCTGCGCCGCTCGCGTCTTCCAACTCACGCGCGAACTCGGTCACAAGTCCGATGGCGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCTGCCGTCATCGCCGCCACCGGGACCGGAACCATCCCCGCTAACTTCACCTCTCTCAACATCTCCCTCCGCAGCTCTGGCTCCTCCATGTCCGTCCCCTCCCAGCTCCGGTCTTCCTACTTCAACCCCAACTTCTCCCTCCAACAACGGCGCACCTTGTTCCCCGGCATCGCCTTATCCTCCGACACCAACCCAACCAACACCTCCACACTTCTCAATTTCCAATCCAACAACCTGAACACCTCCATGCTCCAGGCGAAGCCCGAAGCTCCCTCCACCTTAGATTTGTCCGACACAAGCGCGGAGGAATCAACCCTAGGCCGGAAAAGAAGACCGACGGAACAAGACCTATCCTCCTCCTCGCAGCACCAAATGGGAAGTTATCTCCTCCAGTCGAGTGCAGGCACGATTCCTGCGAGCCACGCCGCCAACATATGGATGGTGGCCAATTCAAACACTAATCAAGTCATGAGTGGCGATCCCATATGGACCTTCCCTCCGGTTAACAACAGTGCCTTGTATCGAGGCACCATGTCTAGTGGGTTGCATTTCATGAACTTCCCCACGCCCATGGCACTTTTGCCGAGTCAGCAACTGGGGTCTTCTGGGATTGGTGCTGTTGGGGGAAGCAGTAATAATAATAGTAATAACAACGGCAATAATAATATGAACGAAGGGCATTTGAGTATGCTTGCGGGGCTCAGTCCTTATCGTCCTGTTATCGGCGTTTCTGAATCTCAGGCGAGCGGCTCGCAATCGCATCGTGGAGGTGCGGCAGATGATCGCCATGATACCACCAGTCACCACTCCTAG


Promoter Sequence:
>Vu_06743::LG1:98429435-98431435(-)
TTTAGGAATTAAGTTGCGCATTTATTTGTATTTTCAGTTTCTTGAAAAAAAATAAAAGAAGGTGTGGGAGAGAAAGTAGGTGAGAGGTCGAGTTTCAGTAATTTGAAATAAGCACGTTATTATAGTTTTTGTTAAGTACAAAGTTGTAAAGTGCCGCAATAATCTCTTAATCTTAGTATAATATATATACAGAGAGAGGGAACCAGGGAGAGAATATCAGTGAACCTTTTGTTACAGTGCTTCAACTCTGGCAATATTTAAATGGTTAAGATATGGGTGGATGTCAAAATACAGTAAGGAAAAGTAAATGGCGACACAGGTTAATTGGATTTTGCGTTGAATTTACATGCATCAGAATTAAATTGCTTGGTGATTAGTTAATGAAATGAACAAAAGTTTTCGTATTTCTTTTTCCAGGAAGGGAAGGGGTATTTTGTCGTTGTCCTATCGGTGGGCTTGCATGTGACAATAACTGATCAAACAACCTCACTATTTGAGACTAACCAAAGTACAGTTGAAGTTTTACCGACTTGAAAGTTGAAGGTTAAAGGTTAAAAGAAAAACTGTTTGATTGGATGTAAATATATGTAGAAGAAAAAGCGCGAAGAAACGAAAATGGAAAAAGGAAAAGCTTGGCCATATTCCCGAAGAGCCGAGAGTTCAAGATTCACTGTCGTGTTCAATACGTGTTAACCTCATTTGTTTCAATCATATAGCATATGTGACAGAGTGAAGTTGTGACTTTCATTTAATTTATGGGTTTGCGGAGCTGGTTTAGGGATGAATGGCGGGCATGTTCCTATAAGAAGAAACTAAAGGGTGTTCATAAATGCAAAGAAAAGGAAATTGGGTTGAATGGAGCTGGGTCACGTTGGCGTAAAAGGAACAGTGTCAGCCTCAACTTGAAGGGAAGGAAACCCCATTAGCTAACGAATAGAAATGATGAAATCGACCTTCCATATGAACAAACATAGCCACTGCTTGTTCTCTCTGAAACTTTACAAGGATTTAGATCCATTTCCATGTGCCACTTGTGGTCCTTAGGCTAAACATGATAACCCGCAATAGCATATATGTTGAGTGACTACAAAATTCCTCATGTATATATATTGTCCTTTTCTCAGAAATCCTTCAAAGATGTTATGTAAAATGGTGTGTTTGGTTGGATTAGCAGTTAAATGAAATTAGAATGATAAGAAAAATGTAAAGGGTGGATTGAGGAATCCCAAAGTTCCCCAGCAAAGGTGCAGAAGAAAAGGCAAAGGCGAAAGGCAAAACGAAATGATTACTTGAATGAGACTGGACCCGCTCGATAATCTTTCCTTTCCAGGTCTTTCAATTTTTTGACTTGGGATCGGGTCCCACTTCGGCCACCATTGTCTTTATGGATTGAATCATAAAAAGATCACCTCACGTGGACTCTGAACCAAAGACTCTGTCCAACCACAATAAAAAGCCACCTCCTCTCCCTTCCATTAGTTTAGTTTAGTTTAACACCCTCTCAAATCTCTCTCATTTCCTCCACTTCCTAACTTACCAAAACCCTTCATTTACTCCTTCTACTACACAACCATAGCTAAACCCACTTATTATATATATAATTAAAAACCTCATCAACATAACAACAAAGCAACTTCTTTTCTCAAAAAAATCATGCTTTTTAAAGCTCACCCACATAATTCCCACTCATTATCTTTGTTGCTTAAAGCTCTTCCCCTCCCACCTCTCCCTTATCCCCTCTCCCTCTCTCTCTCCCCTAAACCCCATCGATTTCAAAACAAATTCCTTCCCTTACACAAAACAAATAACTACACACACATCCCCTCCTCTTAAAAACCAGAAAGACCCACCACACATATTAAACTACAAACTCACTGATCACAACCTCTCTCATAAGAAAAAAGGATCACCCACACAAACACCATCATACACAAACACACACACTCACTCACTCACTCACACTCAACGCACCAACAACTTTATTTCCTCTCCATGCGATC


Gene Sequence:
>Vu_06743(-)
ATGGAAGGAGGCGACGATCTCCACCATCATCACCACCACCACCACCGTCAGAACTTCCCATTCCAGCTCCTGGAGAAGAAAGAAGACCAAGAAGCGGCCTCGTGCTCCACCTCCTCCCCCTACCCTTCCCTAGCAATCTCCGCGGAACCCACCACGTCCAACTCCACCCGATCCAACCAGCTCGCGGCGGCGTCGGACCCTCCAAACAGACAAAAGCCCCCACCCAAACGCACGTCGACCAAGGACCGGCACACGAAGGTGGACGGTCGTGGCCGCCGCATCCGAATGCCCGCTCTCTGCGCCGCTCGCGTCTTCCAACTCACGCGCGAACTCGGTCACAAGTCCGATGGCGAAACCATCGAGTGGCTCCTCCAGCAGGCGGAGCCTGCCGTCATCGCCGCCACCGGGACCGGAACCATCCCCGCTAACTTCACCTCTCTCAACATCTCCCTCCGCAGCTCTGGCTCCTCCATGTCCGTCCCCTCCCAGCTCCGGTCTTCCTACTTCAACCCCAACTTCTCCCTCCAACAACGGCGCACCTTGTTCCCCGGCATCGCCTTATCCTCCGACACCAACCCAACCAACACCTCCACACTTCTCAATTTCCAATCCAACAACCTGAACACCTCCATGCTCCAGGCGAAGCCCGAAGCTCCCTCCACCTTAGATTTGTCCGACACAAGCGCGGAGGAATCAACCCTAGGCCGGAAAAGAAGACCGACGGAACAAGACCTATCCTCCTCCTCGCAGCACCAAATGGGAAGTTATCTCCTCCAGTCGAGTGCAGGCACGATTCCTGCGAGCCACGCCGCCAACATATGGATGGTGGCCAATTCAAACACTAATCAAGTCATGAGTGGCGATCCCATATGGACCTTCCCTCCGGTTAACAACAGTGCCTTGTATCGAGGCACCATGTCTAGTGGGTTGCATTTCATGAACTTCCCCACGCCCATGGCACTTTTGCCGAGTCAGCAACTGGGGTCTTCTGGGATTGGTGCTGTTGGGGGAAGCAGTAATAATAATAGTAATAACAACGGCAATAATAATATGAACGAAGGGCATTTGAGTATGCTTGCGGGGCTCAGTCCTTATCGTCCTGTTATCGGCGTTTCTGAATCTCAGGCGAGCGGCTCGCAATCGCATCGTGGAGGTGCGGCAGATGATCGCCATGATACCACCAGTCACCACTCCTAG