Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06750 LG1 98515125 98515361 PREDICTED: mini zinc finger protein 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   plant-type ovary development, regulation of transcription, DNA-templated, plant-type ovary development, floral meristem determinacy, regulation of transcription, DNA-templated, floral meristem determinacy, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, floral meristem determinacy, plant-type ovary development, plant-type ovary development
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, cytoplasm, nucleus, nucleus
Molecular Function   enables   protein binding, DNA binding, protein homodimerization activity, protein binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, transcription cis-regulatory region binding, protein binding
SNP Position Effect Amino acid change
T/C 98515268 synonymous_variant p.Ser48Ser
G/A 98515287 missense_variant p.Ala55Thr
C/T 98515358 synonymous_variant p.Asn78Asn

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06750.1
MKKRQVVVKREYAASSAVGNIRYGECQKNHAANTGGYAVDGCREFMASAGEGTTASLTCAACGCHRNFHKKEVLHGVN*


CDS Sequence:
>Vu_06750.1
ATGAAAAAGAGGCAGGTGGTGGTGAAGAGAGAATACGCCGCTTCTTCTGCGGTGGGGAATATTCGATACGGGGAGTGCCAGAAGAATCATGCAGCCAACACCGGAGGTTACGCAGTGGATGGTTGCAGGGAATTCATGGCTAGTGCCGGTGAGGGAACGACTGCTTCGCTTACATGTGCGGCTTGTGGCTGCCACAGGAACTTTCACAAGAAGGAAGTACTGCACGGAGTCAACTGA


Promoter Sequence:
>Vu_06750::LG1:98513125-98515125(+)
CAGGAACATGAAGATATGGGTAATGGTTAATGTGTGAGTGAGAAGAAAACGGTAGAAGTGCCCCCTACACGCATAGTCTTCAATGGAACTAAACAGCCACACACACTTCCATCAGTACTTGACGTTAGCCAAAAGGACAGATTACTATACAGCCAGGCATCACAGCACATTGTTTCAACGCCTTCATAAATATTTGACACGATTCACATCTCAACGCTGGCAAACTTATGCCATTGTCTTCAAAACCCTTTTCCTTTCCTTTCCCCTTATATGTAATGCTGTTTTTCTCATAACCATAAACACAATGGTTCAAGCTTATCTCTTACATTTCATACTGGTTTTACTTTTAACGAACGATGGCATGGACTTCGTAGTCCAAATATATGATTAATTAGGGGGTTATTGTTTAAAGAGAAGAAGGAAATTGAGATGAATTTTGAATTCGTGATGTTTTATTTGGGTGTGTTTTCGAATTGTAGTCTAATTAATGTAAACGAGTTATGTCGATGTCTGATTGACAAGCACGAGTCCTTGTCCTTTGTCATGTTCTCAAATGTGCACATGTTACTGACCCATTGTGGGCTTGTCCTTTCTAGTTCTTTACTTTGAAATGGTGTTGGTGGAGGCTCCTCATGCCTGCTTGAACATGTATTACTAATGGATTAATTGAAGAATCCATACCTTTCAACGTCAAACATGTCTATGGTTTCGTATTCTTCCATATCCAATCCTAGCACAATAAGAATATTTCAAAATCCTCATTACGCAGATCTTGTGGAAGCGGCCGGTTGGTCACTTCTGTTTTCTTTCCCTTCTTCTACTTTCTACATATTCTACTTCCTCCTATATTTGCAAACCCATGCAGTGAAAACTAAAAATACAGGACACTTCAATCATCTCATGTTTTCTGGTTAAATTAATAAGCAATAACAACAACAACACAAACATGAAATAAATCGGTTTAACCAAAACTAGGTTTGATGATGGCAGATAGGTATTGTAGGAAGCATATAAAAGTGAAATTTAGAAAAATCATGACGTTGTCCTTGATTTGATCCAAAGGGGAGAAGATAAGGGTCCACACTGGGTATATGAGAGTGTGGGGGAATGGTCTTATAATTATTAGAATCTTACAAGAGTTGTTGTCACAGTAGCAAGGGCCAGCAATCTACCTTTTTAGTATCAAATCGGACCCACTGCAGATATAAAATTAGCGGCTGAGTCTAGTTAAGTGGTTTAATCTCTGAGGTTTGGGCGAAAACCAGTTTACTCTCATCTCATGGTATGATGATATTCATAAATTGGTGACAAATTCTGCCATGTATATAAAGGTAGGCATGCAGCTAAATGTGTTGTGTTTTGGTTTTTGTTGTTTTGGAAGAGTGATAGGTGAGCCATCAATTGTGGAAGACAAGTCCAGGGTTGTATGGGTAGTGTGAGGACAAGCATTCCCTCATTGAGCTCCCATTTTAAGTTTTGTCCTCTTCTGAATCAGAGGGCGCCACCTCCAAAACAAACAGCTGATCTTCGTGCAATAAACATAAACACTTGAACCTTTCTCTTGCTTTGTAGCCAATTAAAACAACCACCGCTCCCTCTTCATGATGTGTTCTTCCTTCATTGGCTCATACACCAATAATCATTAATGCTTTCACTACTCCTTTTTTGCCTGTCCTCTTCAAAATTTATTTTATTTAGACCATCAAAAACTTTCTGCTCTATTTATCATCACTTATGATCACATTTTCCATCTCTTCATCCTACCTATAGCCCCCTCGCCCCTACTTCTCTGCCATTTATAAATCTACACGCTAGGGTTAGGGTTACCCACCAACTATATATTAATTGTATATAGACACAGCTACCTAGGGCGCTATATTATTATATTATATATACACATCTATCTCTATATCAATCCCGTTTTCTCTTGTGTCGATCCCCTACTTACTTTTCTGCTCTGTGGTGTGCGGAATCAAGCGGCGGTTAGGGTTTTGCCAGGA


Gene Sequence:
>Vu_06750(+)
ATGAAAAAGAGGCAGGTGGTGGTGAAGAGAGAATACGCCGCTTCTTCTGCGGTGGGGAATATTCGATACGGGGAGTGCCAGAAGAATCATGCAGCCAACACCGGAGGTTACGCAGTGGATGGTTGCAGGGAATTCATGGCTAGTGCCGGTGAGGGAACGACTGCTTCGCTTACATGTGCGGCTTGTGGCTGCCACAGGAACTTTCACAAGAAGGAAGTACTGCACGGAGTCAACTGA