Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06775 LG1 98700621 98703062 PREDICTED: probable receptor-like protein kinase At5g61350
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   root hair cell development, regulation of calcium ion transport, root hair cell development, root hair cell development, root hair cell development, cellular ammonium homeostasis, root hair cell development, protein autophosphorylation, protein autophosphorylation, root hair cell development, root hair cell development, root hair cell development, protein autophosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plant-type vacuole membrane, plasma membrane region, plant-type vacuole membrane, chloroplast, plasma membrane region
Molecular Function   enables   protein kinase activity, transmembrane receptor protein tyrosine kinase activity, protein kinase activity, protein kinase activity, kinase activity, transmembrane receptor protein tyrosine kinase activity, protein kinase activity, transmembrane receptor protein tyrosine kinase activity, transmembrane receptor protein tyrosine kinase activity, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
A/G 98700704 synonymous_variant p.Leu28Leu
C/T 98700830 synonymous_variant p.Ala70Ala
T/C 98700989 synonymous_variant p.Pro123Pro
C/T 98701115 synonymous_variant p.Asn165Asn
A/T 98701123 missense_variant p.Asp168Val
T/G 98701124 missense_variant p.Asp168Glu
A/G 98701434 missense_variant p.Arg272Gly
A/G 98701524 missense_variant p.Ser302Gly
G/A 98701721 synonymous_variant p.Arg367Arg
C/T 98701733 synonymous_variant p.Asn371Asn
A/T 98701944 missense_variant p.Ile442Phe
C/G 98701953 missense_variant p.Leu445Val
A/G 98702101 missense_variant p.Lys494Arg
C/T 98702121 missense_variant p.Arg501Cys
A/C 98702142 missense_variant p.Lys508Gln
C/T 98702235 missense_variant p.Leu539Phe
G/A 98702397 missense_variant p.Val593Ile
T/A 98702507 synonymous_variant p.Ala629Ala
C/T 98702508 missense_variant p.Arg630Cys
T/A 98702633 synonymous_variant p.Val671Val
G/T 98702634 missense_variant p.Val672Phe
T/C 98702702 synonymous_variant p.Tyr694Tyr
T/C 98702951 synonymous_variant p.Cys777Cys
T/C 98702997 missense_variant p.Tyr793His
G/C 98703018 missense_variant p.Ala800Pro
G/A 98703054 missense_variant p.Ala812Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06775.1
MDVENKGTRLKPTFLLFLVILHLFFSTLAKSSFTPHVNYLLDCGSSHPTQLTDGRTFKSDRETTSLLATAEDVQISLYSNLSPSVPSSLLPLYQTARVFQEESTYSFYISKTGRLWVRLYFFPLSNPSYNLTTAVFSVQTNHHVLLHEFSARNNDSPVFKEYLVNVSDSRFSLKFKPKKGSFAFINAIEVVSVPDALISDSATALSPLGEFKGLFNSALEVSYRINVGGPTITPDDDTLARTWETDGSYNIFPQGSETISVSKKGIKYPDTRVTPTIAPNLVYASAVHVKNATFMLPNFNLSWMVNVDRSYSYLIRMHFCDILSRSLNQLYFNVYINGIEGVSALNLSSQTKALATAFYQDFVLNARDITNGSILVQVGPTNLPRGPTDAILNGFEVMKISNIADSLDGLYSVDGKYKGPCSTTMEMKILAYVGIALAVTTILLLVITCIRWKKRPQGRENHNRFSSSPLPVHSPISCSSKSSCRGSTASSSRKSNKHDHRVTPQGPKRFFPFSEMRQATNNFEEKRVIGVGGFGKVYLGTLKDGTKVAIKRGSGNSEQGINEFRTELEMLSKLRHRHLVSLIGFCDENSEMVLVYEYMANGPFRSHIYGFDLPCLSWQKRLEICIGAARGLYYLHTGAAQSITHRDVKTTNILLDENYVAKVSDFGLSKVVPDEAQVSTAVKGSFGYLDPEYYRSQQLTQKSDIYSFGVVLFEVLCARPVICPTRPTEEINLAEWAKKQNRRGLVNEIIDPRIGVTMNPQSLSVFVEIAERCLADCGVDRPSMGDVLWHLEYALRLQEAASRIDEAEDKRAI*


CDS Sequence:
>Vu_06775.1
ATGGACGTAGAGAACAAAGGAACCAGACTCAAACCTACGTTTCTATTATTCCTTGTCATTCTTCACCTTTTCTTTTCCACCCTAGCCAAATCTTCTTTCACACCTCATGTTAACTATCTCCTTGATTGTGGCTCCTCCCACCCCACTCAGCTCACAGATGGAAGAACCTTCAAATCTGATCGTGAAACCACTTCTCTCCTAGCCACAGCCGAAGATGTGCAAATATCACTTTACTCAAATCTCTCCCCTTCTGTTCCTTCTTCATTGCTTCCTTTGTATCAAACTGCAAGGGTTTTTCAAGAGGAATCCACCTACTCCTTTTACATATCCAAAACTGGTAGACTTTGGGTTCGCCTTTACTTCTTCCCTCTCTCTAACCCTTCCTATAACCTAACAACTGCTGTCTTCTCTGTCCAAACTAATCACCATGTGCTCCTGCACGAGTTCTCCGCCAGGAACAATGACTCACCTGTTTTCAAGGAATACCTTGTTAACGTTTCTGATAGTAGATTTTCCCTCAAATTCAAGCCCAAGAAAGGCTCCTTTGCGTTCATCAATGCAATTGAGGTTGTCTCAGTCCCCGACGCTCTTATTTCGGATTCAGCAACTGCACTTTCCCCACTTGGTGAATTCAAAGGCTTGTTCAATTCTGCTCTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCCACCATAACTCCTGACGACGACACTTTGGCAAGAACATGGGAAACTGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTATTTCTGTCTCCAAAAAAGGCATAAAGTATCCTGATACTAGGGTTACACCTACGATTGCTCCCAACTTGGTTTATGCAAGTGCTGTACACGTGAAGAACGCTACATTCATGCTACCGAATTTCAATCTCAGTTGGATGGTGAACGTGGATAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATTTTGAGCAGGAGTCTTAATCAGTTATACTTTAATGTGTACATCAACGGGATTGAGGGTGTATCAGCTTTGAATCTATCATCGCAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTTTGTGTTAAATGCACGGGATATCACAAACGGTTCCATTTTGGTTCAGGTGGGACCGACCAATCTCCCACGTGGCCCGACCGATGCAATTCTGAATGGATTTGAGGTGATGAAGATTAGCAACATCGCAGACAGCTTGGACGGTTTATACTCTGTTGATGGGAAATACAAAGGGCCATGTTCAACAACCATGGAAATGAAAATTTTGGCTTATGTTGGAATTGCATTGGCTGTGACAACAATTCTGTTGCTAGTAATAACTTGCATAAGGTGGAAAAAGAGGCCTCAAGGTAGGGAAAATCATAACAGGTTCTCATCAAGCCCCCTTCCTGTCCATTCCCCTATATCGTGTTCAAGCAAAAGCAGTTGTCGAGGGTCAACAGCATCCAGTTCCCGCAAGAGCAATAAACACGATCATCGTGTCACCCCACAAGGGCCCAAAAGGTTCTTCCCCTTTAGTGAAATGCGACAAGCCACCAATAATTTCGAAGAGAAAAGAGTAATTGGTGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAATTCAGAGCAAGGCATCAATGAATTCAGAACAGAACTGGAAATGCTGTCAAAGCTACGCCATCGCCACCTTGTCTCATTGATAGGTTTCTGTGATGAAAACTCAGAGATGGTTCTTGTGTATGAGTACATGGCTAATGGCCCTTTTCGTTCTCACATCTACGGGTTCGACCTGCCTTGTTTGTCATGGCAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGTGGGTTGTACTATCTCCACACTGGCGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATACTCCTAGATGAGAATTACGTGGCCAAGGTTTCTGACTTTGGTTTGTCAAAGGTTGTCCCAGATGAAGCTCAAGTTAGCACAGCAGTGAAGGGTAGTTTTGGGTACCTTGACCCTGAGTACTATAGGAGTCAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTATTATGTGCTAGGCCAGTTATTTGCCCAACACGTCCAACAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAGAATAGAAGAGGATTGGTGAATGAAATAATTGATCCACGTATTGGTGTTACTATGAATCCTCAATCACTCAGTGTTTTTGTGGAAATTGCTGAGAGATGTTTAGCAGACTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCGTTGCGCCTACAAGAAGCTGCCTCACGGATTGATGAAGCTGAAGATAAAAGGGCAATATAG


Promoter Sequence:
>Vu_06775::LG1:98698621-98700621(+)
ATGGTGTATGACCCGGATTTCATATACCTCATATAATAATAATTTATTTATTCAATATATATTTTATAGGGGTAAAGTAGGAGCTATAGAAAACTTTTGGGTGCAGAAAGCAAAACAAAACAATCGGTACACGAAGAAACGCCAGAGAACGGACTATTATCCAATAATGGGTGTTTCACCCTACAGCTTCAAGGATTTCACCTGCATTTTCAAATTCCAATTTGTCCTCTAATTAATGATGTTTCATGAATATTATAATGATAACGGTATTATTAATTATTTATAATCTTATTATCATATATTAAAAAAAATAACATTTGTATTGTGCTTTTAATTTTAATTTATGCTAAAAATTTAAAAAATTTAATGACAAATGAAATTAATAAAACGTGTGCTTATTCAAAAATGAAAAACATATAAAAGTTATTATTATGAGAAACAAGAATAAGTATCCGATCTCGAAATCCGATTTTTCTTAAATCAGATTTCGAGATTCAATGTTTTTCTGATACAGTTTTTTTTAATTATATTATTTATAAATATTTATTAGATTATTTTAAAACGTTTTATTATATTATTTCTAAATGTTTAATTAGGTATTTTGTATGCATTAATTTAATTTATAAAAAATAAATTTATTTAAAATTGATAAATTTATTTAAAAATGATATGAAAAATTTAAAATATCTTTTAGGTAGTGTTAAGTATTATTAATTTATTAAAATAATTTAAAATAAATATTAATATTTACAAACAAAATTATTTAATTCATAATTAATTCAAATATTTATATATTTATAAAATCTAAATATTTCATTAAAAAATAATTATATATCTTAAAATTATAAAACAAGATATTTTAATGGAGATTGAGAATTCTAGGTAAAGATTCTTCTACTTTTATTAAAATTTAATCACTGTCTTAATGGAAGATATTACACATATTTTAAAAAATTTTTAGAAAATTTTGGAGGTACGGTGAAACGCTGTGGAGTAATTACCTAAATGGATCATCAAAGACCAATGTTCCAAAAGAGGTTTGAAAGACTACTTCACTCTTCACCTTCAAACATTTTAATATGCACCTCTAATTTTCAAAAATAGTATTAGGGTTAATTTTTTTCATCGAATTTCGAAATCGGATGAAGAATTTTTTTTTCATCAAATTTCGAAATCCGAAAATTTTTTCTTTTTAAATTTTATAGGATCTCAAAATCTGATAAGAAAATGAAAAATCTTATATTGAATTTCGAAATCTTATAGTACAAAATGTGGGATGTATGATTTTTTGAATTGCAGAGAATAATTTTTAAATTTTAAAAAATTATAGGTGGAGGAAGAAATGATAAAAAATGCAGGGTAAACAAGTCTTTAGAAAATTTAGAACCCTTCAACATTGAAGCATTCTTAACACGTGAGAAGGTAAATAAGCTTGTGACCAGGATGACAAAACAAACTAGGCCATAGATCAAATTTTTATTATTGAATATAAAATATAATTTGTATATTAAAAATACTTATTTATCATAAATTCGAATCATAATATTATATATTTAAAAATATGATTTTACTATAAATTTTAATCACATAAAATAAATATCCATGTTGTGGAATGTATAATCTAAATGATACTATTTCTTAAGAGCAATGATCATTTATGTCTGGATGCATAGCATCATGCGAAAACATAATTTTTTGTTTGTAAACAGATTCTAGTTTGGATGTTACTCGGTTTGTACTTGCTGATTGATGAAATCTGAAAGTATTTTAGGAGAAACGACCATGGTTAGGTCCAACGTTCTACCGATTCTAACAACCTTTCTAACATGCAACAATACTTTCTTCTTCTCCCTCTCTCTCTCGCTACAAACAAAACACCTCTCTTCTGTTCCTCCAACTGCTGCATGCACCCTCTCCATACATAAAACCATCTTTATTTCTTCCTCTTTTTCATGCTTTATCTTCACCCTTCCACCACCCTCATTGTCCAACCTCAGCAA


Gene Sequence:
>Vu_06775(+)
ATGGACGTAGAGAACAAAGGAACCAGACTCAAACCTACGTTTCTATTATTCCTTGTCATTCTTCACCTTTTCTTTTCCACCCTAGCCAAATCTTCTTTCACACCTCATGTTAACTATCTCCTTGATTGTGGCTCCTCCCACCCCACTCAGCTCACAGATGGAAGAACCTTCAAATCTGATCGTGAAACCACTTCTCTCCTAGCCACAGCCGAAGATGTGCAAATATCACTTTACTCAAATCTCTCCCCTTCTGTTCCTTCTTCATTGCTTCCTTTGTATCAAACTGCAAGGGTTTTTCAAGAGGAATCCACCTACTCCTTTTACATATCCAAAACTGGTAGACTTTGGGTTCGCCTTTACTTCTTCCCTCTCTCTAACCCTTCCTATAACCTAACAACTGCTGTCTTCTCTGTCCAAACTAATCACCATGTGCTCCTGCACGAGTTCTCCGCCAGGAACAATGACTCACCTGTTTTCAAGGAATACCTTGTTAACGTTTCTGATAGTAGATTTTCCCTCAAATTCAAGCCCAAGAAAGGCTCCTTTGCGTTCATCAATGCAATTGAGGTTGTCTCAGTCCCCGACGCTCTTATTTCGGATTCAGCAACTGCACTTTCCCCACTTGGTGAATTCAAAGGCTTGTTCAATTCTGCTCTTGAAGTATCCTACAGAATAAACGTTGGTGGTCCCACCATAACTCCTGACGACGACACTTTGGCAAGAACATGGGAAACTGATGGTTCATACAACATCTTCCCACAGGGTTCTGAGACTATTTCTGTCTCCAAAAAAGGCATAAAGTATCCTGATACTAGGGTTACACCTACGATTGCTCCCAACTTGGTTTATGCAAGTGCTGTACACGTGAAGAACGCTACATTCATGCTACCGAATTTCAATCTCAGTTGGATGGTGAACGTGGATAGGAGCTACTCTTATTTGATAAGAATGCATTTCTGTGACATTTTGAGCAGGAGTCTTAATCAGTTATACTTTAATGTGTACATCAACGGGATTGAGGGTGTATCAGCTTTGAATCTATCATCGCAAACCAAAGCTCTAGCCACTGCTTTTTACCAGGACTTTGTGTTAAATGCACGGGATATCACAAACGGTTCCATTTTGGTTCAGGTGGGACCGACCAATCTCCCACGTGGCCCGACCGATGCAATTCTGAATGGATTTGAGGTGATGAAGATTAGCAACATCGCAGACAGCTTGGACGGTTTATACTCTGTTGATGGGAAATACAAAGGGCCATGTTCAACAACCATGGAAATGAAAATTTTGGCTTATGTTGGAATTGCATTGGCTGTGACAACAATTCTGTTGCTAGTAATAACTTGCATAAGGTGGAAAAAGAGGCCTCAAGGTAGGGAAAATCATAACAGGTTCTCATCAAGCCCCCTTCCTGTCCATTCCCCTATATCGTGTTCAAGCAAAAGCAGTTGTCGAGGGTCAACAGCATCCAGTTCCCGCAAGAGCAATAAACACGATCATCGTGTCACCCCACAAGGGCCCAAAAGGTTCTTCCCCTTTAGTGAAATGCGACAAGCCACCAATAATTTCGAAGAGAAAAGAGTAATTGGTGTTGGAGGCTTCGGGAAAGTGTATCTTGGAACGTTGAAAGATGGGACAAAGGTTGCCATAAAACGAGGAAGTGGTAATTCAGAGCAAGGCATCAATGAATTCAGAACAGAACTGGAAATGCTGTCAAAGCTACGCCATCGCCACCTTGTCTCATTGATAGGTTTCTGTGATGAAAACTCAGAGATGGTTCTTGTGTATGAGTACATGGCTAATGGCCCTTTTCGTTCTCACATCTACGGGTTCGACCTGCCTTGTTTGTCATGGCAAAAGAGGCTTGAAATATGCATTGGTGCAGCTCGTGGGTTGTACTATCTCCACACTGGCGCAGCTCAAAGCATCACACACCGTGATGTGAAGACAACAAACATACTCCTAGATGAGAATTACGTGGCCAAGGTTTCTGACTTTGGTTTGTCAAAGGTTGTCCCAGATGAAGCTCAAGTTAGCACAGCAGTGAAGGGTAGTTTTGGGTACCTTGACCCTGAGTACTATAGGAGTCAACAACTAACTCAGAAATCTGATATATACTCTTTTGGGGTAGTCCTATTTGAGGTATTATGTGCTAGGCCAGTTATTTGCCCAACACGTCCAACAGAAGAGATTAACTTGGCTGAATGGGCAAAGAAACAGAATAGAAGAGGATTGGTGAATGAAATAATTGATCCACGTATTGGTGTTACTATGAATCCTCAATCACTCAGTGTTTTTGTGGAAATTGCTGAGAGATGTTTAGCAGACTGTGGTGTTGATAGGCCTAGCATGGGGGATGTGTTGTGGCATTTGGAATACGCGTTGCGCCTACAAGAAGCTGCCTCACGGATTGATGAAGCTGAAGATAAAAGGGCAATATAG