Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06904 LG1 100052318 100055030 PREDICTED: myb family transcription factor EFM
Map

Annotations  
category   relationship type   keyword
SNP Position Effect Amino acid change
G/T 100052410 5_prime_UTR_variant
C/A 100052506 missense_variant p.Ser17Tyr
T/C 100052841 intron_variant
T/A 100053079 missense_variant p.Ser99Thr
A/G 100053102 synonymous_variant p.Ser106Ser
T/C 100053228 synonymous_variant p.Ala148Ala
G/A 100053304 missense_variant p.Ala174Thr
C/T 100053310 missense_variant p.Arg176Trp
G/C 100053312 synonymous_variant p.Arg176Arg
G/T 100053370 missense_variant p.Ala196Ser
A/G 100053615 intron_variant
A/T 100053729 intron_variant
T/G 100053730 intron_variant
T/G 100053737 intron_variant
A/T 100053738 intron_variant
A/G 100053941 synonymous_variant p.Glu277Glu
C/T 100053956 synonymous_variant p.Asp282Asp
G/C 100054131 intron_variant
T/A 100054138 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06904.1
MASPSELSLDCKPQSYSLLLKSFGDQTDQTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAMEASRQQLQAFKVNHGAKPVLEEFIPMKHLASESSEKATNISDKANWMTSAQLWSQASEGAKQQPTLTSPKEADIGFSISPKLALDNKPRNGGGAFLPFSKERNSCQGSALRPLPELALASSEKEMEDKKRAEAEKGLSCQNKKENSGSDGAVVDQGKSGSPVASSLAQTTTTTSQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQANAAAPQLVVLGGIWVPPEYATAAHTGTPTLYGAHPTSHAPPPHYCTATPVPQEFYTAAPQQQLLPPPPPHHNPLHHLHMYKAAAHGHGSPESDLPGGGERSESIEDGKSESSSWKGESGENEGERKGIGEESNGSEITLKF*


CDS Sequence:
>Vu_06904.1
ATGGCATCACCATCAGAACTTAGTCTTGATTGCAAGCCCCAAAGCTATTCCTTGCTACTCAAATCCTTTGGAGATCAAACTGATCAGACCTACAAGCTTGAAGAATTCCTCTCTCGCTTAGAGGAAGAACGTCTCAAGATTGACGCCTTCAAGCGTGAGCTTCCTCTCTGCATGCAGCTTCTCACCAACGCCATGGAGGCTTCAAGACAGCAACTTCAAGCCTTTAAAGTAAACCATGGTGCAAAACCAGTTCTGGAAGAATTCATACCCATGAAGCACTTGGCCTCAGAAAGCTCAGAGAAGGCAACAAACATATCAGACAAGGCAAATTGGATGACATCTGCGCAACTGTGGAGCCAAGCGAGTGAAGGAGCCAAACAACAACCAACATTAACATCACCCAAAGAAGCTGATATAGGCTTCAGCATCAGCCCCAAGCTGGCTCTGGACAACAAGCCGAGGAACGGTGGAGGAGCCTTCCTTCCATTTTCAAAGGAAAGAAACTCCTGCCAAGGCTCCGCATTGCGGCCTCTACCTGAACTTGCCCTTGCCTCTTCGGAGAAAGAAATGGAGGACAAGAAACGTGCAGAGGCAGAAAAGGGACTTTCGTGTCAGAATAAGAAGGAGAATTCTGGCAGTGATGGAGCTGTGGTTGATCAAGGAAAAAGTGGTAGCCCAGTTGCATCATCTCTTGCACAAACAACAACAACCACTTCGCAAACTCATAGGAAAGCTAGAAGGTGCTGGTCACCAGACTTGCACCGTCGATTTGTTAATGCTCTCCAGATGCTCGGTGGATCACAAGTGGCAACCCCAAAGCAGATAAGGGAATTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGAAATATAGGCTTCACACAAGAAGACCCAGTCCAAGCCCTCAAGCGAATGCAGCTGCTCCACAGCTCGTGGTCCTAGGCGGAATCTGGGTCCCACCGGAATATGCCACTGCGGCACACACAGGCACCCCAACTCTCTACGGCGCCCACCCAACCTCTCACGCGCCGCCGCCACACTACTGCACTGCCACTCCTGTGCCGCAAGAGTTCTACACTGCGGCGCCGCAGCAGCAGCTGCTTCCGCCTCCTCCGCCTCATCACAACCCGCTCCACCACCTGCACATGTACAAGGCAGCGGCACACGGGCATGGGTCACCGGAGTCGGACCTTCCCGGAGGAGGAGAGAGGTCGGAGAGCATTGAGGACGGGAAGTCGGAGAGTAGCAGCTGGAAGGGAGAGAGTGGGGAGAACGAAGGGGAGAGGAAAGGGATTGGTGAAGAGAGCAATGGGAGTGAAATCACTCTGAAATTCTAG


Promoter Sequence:
>Vu_06904::LG1:100050318-100052318(+)
TCTATTGCAATATATAAAACTTGAAAGACGAATTATGACACGTTAATCAACTTATTTTATTTTTGTCTTTTGCATTATTTTTCTTACAATTAATCATCATTTGTTTTGATCATCTATTTTAATTTCTTTAAAATATTGAACAATTAATATATATATATAATCTCACAAGCTTTACTTTGAATACATCTATTTCATTGACTTATGTTAGGAAGTTAAAATAAGCATCATATACTCAACGAAACTATTCCGAACACTTATAAAATTCTGACTTATTTTATAAGATATATAAATAAAAATTGACTAAGTTGTTTTGGCTTTTTACAATTTACAATTAAGTGACTTATAATAATTTATCATTAATATTACGTGAAAGTCTCAGAATATAGGCTTGAAATGAATAGGTTTGGTAGATGCTTAAGGAATTGTTGAGAGAATAATGTGATGAATTATAGTATATAAGAAAAACCATCATAACCAAAAATGCAAATAATACATATGTTTATGATCACTTTATCGTTAGATCAAACTCACATGAAAGTTTAAGTAATAAGAGAATAGCGACATTAGTATATATATATTTGTAATTTAATAATATCTCTTTGTGTATTATATAGTTTGATAAGAAAATGATATAGTAGATAGAGAAGATTTTAAGAAAAAGTAGAGTTTAATTTGATTGTTTGTGTGAAACCCGGAAAGAATGAAGTAAACGAGACGTGATCCAATGAATGAACCATATGAAGGAAAAATGGTTTAACATGCAAAAGAGAATCTTCTTAGCTTCTTACCCACTTCATTAAAGATGGTAGCAGAAGAAGATTCTCGTCTGATAGGCTCCTTTATCACTCTTTTAGAGCATGATTTTTTTTTTCTTCCCTTTAAGCTTAGTGGGTTGTGTTCCCTTAATTTAGAGTCGCAGAATTGGAACTAAGATATTCCTTTCTTGGAGCCAAATATTTTATTCTGTATAGTGAGTGTCTAGTTTTTTAGATTAGATATTCCTCCCCTTCCCTCAATGCACTCCAATTCATCACAATTATGCAACTTTTTCGACTCAAAGAGAAAGTTGCAAGCTAGTTTGATACTAAACACCTATTTGAATATGTGCTTTCCCTCTCCTTCTTTCTCCCTTTCTCTTTATTCACTGTGTTGGTAAAAATTATGTTCATCGTATATGCTCCCCCACAATTCAAACTCTTTCCATTAATTAATCATCACAGATTCATTAATTGCTGCTGTAACACCAATTCCATAACATCTGCATCCATATCTTCATTTCACAAAGCAAAATCTATTATACTACTACATACACATACATCCATGCATGCACATGCATATACATATTAAATGATTTATATCTATCCTTTTACTTTGTGCCTAAGACTTTTGAAGAAAAAATTGATGAATATATCCTGTAAATCAAGATATGAGTGGTGAAAAGAAGAAAGTATGACAGGAAGAAAAGAAAGGGAACAAAGATAATAGAGCGTTAATAAGATTTTGATTTGAAATTGTTGGAGAATCTGAGTCTTATTTGCGCACAGGTGTAGCTGGTATGAAAAGAAAGGGAAAATAAAAGGAGTAGACGAGGGATAAAAAGAGAGAAAGGAGTAAAGAAAAAAAAGGAGTAACAGTAAGAAGAATCATCTTTTGTATTAGTGATTTTGAATTCGTACAAAGAACACTGAGAGGTTCTAAAACCAGGCTCTAAGCACATGACCCTCTAATGTCAGACTCTCTGATTCCTTCACCTCTCTCATTTTTTGCACTTTTTTTGCATTGGTTCTTTGTAGGAAGTTACTTCTCTCTGCTTTATCCCATGCTTTTTCTTTTCTTTTCTCTCTCTCTCTCTTGAACCTGCTTTATTCCCATTGAACTCACCTCTAAAAGAAGACGATCCTCCCTCGATCCTCCTTGTGTTCAGAAACAACACTACCTCCCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCCCCACCAAAAATC


Gene Sequence:
>Vu_06904(+)
CACAAAGGAAGAAGCCAAACACGCTCTTTTGCTCTTGTTTGTTCCCACATACCACCCTGTTCCTATTTTGGCATGAACATATTTTAAACAGTGAGTGCTTGTGAAATCAGTTGCTATAACTATACGTGAAAATTAGGGAATGGCATCACCATCAGAACTTAGTCTTGATTGCAAGCCCCAAAGCTATTCCTTGCTACTCAAATCCTTTGGAGATCAAACTGATCAGACCTACAAGCTTGAAGAATTCCTCTCTCGCTTAGAGGAAGAACGTCTCAAGATTGACGCCTTCAAGCGTGAGCTTCCTCTCTGCATGCAGCTTCTCACCAACGGTACACAATTCAAATCATCCTTTCATAAAAACCACCATTAAATTAATTCAACATACAGAATCGTAAACCTTAAAGATTCAAGCTTCCGATTCTATTTTAAATATACAGATACATAGATAAATAGATGCAACACTAACAAATTTACTCCTTCAGTATTCCGTTTTCTTATCATTCAGATTTTTCTAATAATAAAGTCCAGTTTGGATATATGATTAGCCTTTATCATCGTCTTCTTCTTATATTATAACACGAAACCATGATTTATATATTCTTCTGTGCACACCAAACAATTCAGTAATTACCCACCCAATTCTTTTCATTGAAACAGCCATGGAGGCTTCAAGACAGCAACTTCAAGCCTTTAAAGTAAACCATGGTGCAAAACCAGTTCTGGAAGAATTCATACCCATGAAGCACTTGGCCTCAGAAAGCTCAGAGAAGGCAACAAACATATCAGACAAGGCAAATTGGATGACATCTGCGCAACTGTGGAGCCAAGCGAGTGAAGGAGCCAAACAACAACCAACATTAACATCACCCAAAGAAGCTGATATAGGCTTCAGCATCAGCCCCAAGCTGGCTCTGGACAACAAGCCGAGGAACGGTGGAGGAGCCTTCCTTCCATTTTCAAAGGAAAGAAACTCCTGCCAAGGCTCCGCATTGCGGCCTCTACCTGAACTTGCCCTTGCCTCTTCGGAGAAAGAAATGGAGGACAAGAAACGTGCAGAGGCAGAAAAGGGACTTTCGTGTCAGAATAAGAAGGAGAATTCTGGCAGTGATGGAGCTGTGGTTGATCAAGGAAAAAGTGGTAGCCCAGTTGCATCATCTCTTGCACAAACAACAACAACCACTTCGCAAACTCATAGGAAAGCTAGAAGGTGCTGGTCACCAGACTTGCACCGTCGATTTGTTAATGCTCTCCAGATGCTCGGTGGATCACAAGGTATATAACAGTTCAATTTAACATAATTAATTGTTTCTTTGTGTGTTAACTGTATAACTTTGAGAAATATTCATTTTTTTTTTGTGTCCGACAAGAAAGAGTATTACAAATATAACTGATTAGGCTGTTATATATCTAAATGAAAATTAATATACATGACAAGATTTTTAGCTTTATAGTATCGATTACTTTAAAGGTTGTCATAAAGAAAGTGATTTCTATGTTTTTTTCATGGTCTTTGAAAATGAAACTAACATATAAATTAAGAAAATGGGTTATTTGAATTTTGCAGTGAGTAATTATGTGTGACTTTGAATGTTTTACAGTGGCAACCCCAAAGCAGATAAGGGAATTGATGAAGGTTGACGGTTTGACCAATGATGAAGTTAAAAGCCATTTGCAGGTAAATGTTTTTCTGTTCAACTCTTCTTGTATGTTCAGACAGACAGGCACCTTTGTTGTTGCTGTACTATTACTGTCATTGTCAACCTGACGTACCATTCTGCATTCCCAAACGAACTTTTTGTAGTTTTGTTACCGTGTTCTTTTCTTTAATCAATTAATTAATATAAAATTCATAATTACATTTCGTAATTATTCTGTTGACAGAAATATAGGCTTCACACAAGAAGACCCAGTCCAAGCCCTCAAGCGAATGCAGCTGCTCCACAGCTCGTGGTCCTAGGCGGAATCTGGGTCCCACCGGAATATGCCACTGCGGCACACACAGGCACCCCAACTCTCTACGGCGCCCACCCAACCTCTCACGCGCCGCCGCCACACTACTGCACTGCCACTCCTGTGCCGCAAGAGTTCTACACTGCGGCGCCGCAGCAGCAGCTGCTTCCGCCTCCTCCGCCTCATCACAACCCGCTCCACCACCTGCACATGTACAAGGCAGCGGCACACGGGCATGGGTCACCGGAGTCGGACCTTCCCGGAGGAGGAGAGAGGTCGGAGAGCATTGAGGACGGGAAGTCGGAGAGTAGCAGCTGGAAGGGAGAGAGTGGGGAGAACGAAGGGGAGAGGAAAGGGATTGGTGAAGAGAGCAATGGGAGTGAAATCACTCTGAAATTCTAGGGTTTGTGAGAAGTGGTTTTAGAATTAGGGTTTTGGTTGCATACCTACCCATGCATGTTGAACTATTCGTTAACAAGAATGGGAAAAAAACAAAGTAAGTAGAACAAAATATCCTAAGCTGTACTTTTTGCATATATATTTCTGTGGTAGTCTCCGGTGCAGAGGGTAAAAGAGGCATAAAAGTGGACATTTGTTTTGTTTTTGCTTTACCAGATGCAAAGTATCGATGCTGCTATGTATCAGTATCAGTGTACTACTATCAAGGGAAGAATTGGATTCCTATAATTGGCATTTTCTGGGTTACAAATTTACCCTTAAGTTTCCCATGTAATAACAATGTCCACCACTAAAAGGATTTTTT