Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06960 LG1 100601916 100602726 ethylene-responsive transcription factor WIN1-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, ethylene-activated signaling pathway, regulation of transcription, DNA-templated, response to water deprivation, ethylene-activated signaling pathway, response to water deprivation, cutin biosynthetic process, ethylene-activated signaling pathway, wax metabolic process, cutin biosynthetic process, response to water deprivation, regulation of transcription, DNA-templated
Cellular Component   located in   intracellular anatomical structure, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, sequence-specific DNA binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 100602258 missense_variant p.Leu119Ser
T/C 100602553 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06960.1
MVQTKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKSITSEDTPSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGRRSDSNWVMTVQLGKKSTDNETHQADSSTSLSLPSSDHHHHHHRESPSGVTGHHHHEEVVRGEIDEEERIALQMIEELLNDRNCPSPSFSNFQERDGGDDDTFFL*


CDS Sequence:
>Vu_06960.1
ATGGTACAAACAAAGAAGTTCAGAGGTGTCAGGCAGCGCCATTGGGGTTCTTGGGTATCCGAAATTCGCCACCCGCTTCTTAAGAGAAGGGTGTGGCTGGGGACATTTGAAACGGCAGAAGAAGCTGCTCGAGCCTATGATCAAGCTGCTATTCTTATGAGTGGCAGAAATGCTAAAACAAATTTCCCAATAACTCAAACCCCTGAAGGTGATCCAAAGAGCATTACCAGTGAGGACACCCCCTCCTCCACCTCCAAGGATCTGGAGGAAATCCTGCATGCAAAGCTTCGAAAATGTGGTAAGGTGCCTTCACCTTCTATGACCTGCTTGAGGCTTGACACAGAGAACTCCCACATTGGAGTGTGGCAAAAGCGTGCCGGGAGACGTTCGGATTCAAATTGGGTCATGACGGTTCAGCTGGGAAAGAAGAGTACCGACAATGAGACTCATCAAGCCGATAGTAGCACTTCTCTTTCTCTACCTTCTTCCGATCACCACCACCACCACCACCGTGAGTCTCCATCGGGTGTGACAGGTCATCATCATCATGAAGAAGTGGTGAGAGGAGAGATTGATGAAGAAGAGAGAATCGCCCTTCAGATGATAGAGGAACTCCTCAACGACAGAAACTGCCCTAGTCCTTCATTCAGCAACTTTCAAGAAAGGGATGGTGGTGATGATGACACCTTTTTTCTTTAA


Promoter Sequence:
>Vu_06960::LG1:100602726-100604726(-)
ACGTCCATTCCCATAAAGTGATGTGTGCATAATAGATATCATCATATAAGCCGCACTCTTCATTTTCTTTACTGTGTTTAATTATGTAGTATTAGGGATGCAAGTGATGTAGCCTTCAAATTAGTGTAACTTTTAATTAACTCAATTAAATTGTTGACTTAGACTGAATTTGTCGTTTCCATTCAACAATTTAATTCAATCTAGCTCAATTATAATTTAGTTAAATTAGTTGAAACAATATTACGTGTAATACAAACATAAACTGTGATCTATTGAAATAACAAGAAATTAAAAACAATAATAATAACTTTATATTGTAATTTACCAATAAAAATATTATATTTAGTATAAAAATTTACTAATACCATTTATAAAATACTATTTATATTATTAAGGCTGAACTATTTAATCTTTCACCATAATATAAGAATATTAAAGAATTTTTTATTATTTTTTTTAATACGATACACTAGACTAATTTTAGTCATAAAAATATCTTTAGAGACTAATTTCCTAATTAAAGATCAATTTAGAGACCAATTTACTTTAATAATGAAAACCTTAATAATAAATATTAGTGACCAATTCAAAAATCAATTTATAGTAAAAATTATTTTTAGTTACCAACTTAAAAATCAATTATAATTTTTTGAACCTATTTTAATTGTTAATAATTTTTAATTTATAATTTGAAATTTAAATTGATCATTATAATAATTAATTATTTTTTGTCACTGAAATTGGATTTTATTTAAGAATTTTTTTTAATGCTATTATACTTTATTATGATATATGATGTTAAAAACATTTACATATTCATATACATGTCTGATACTAATACTAACAGAAACATATTTCAACAAAATCAAACGATATGTTGACACAGTTAATAAAACAATTGTTGTAACTGAATTAACCTTATTTTTATTAATAAAATCAATCATTAATGATAATCACGTTATTGAATTTAATTGATTATTTAAAAACAAAATTCAAAACACAAGTTTCAAATAATTATATTTCGAAAGTGCTAGCACGGACTCTATTTATGCAATATATGAACATAATATATCTAAAACAATATGAACTATTTATATTTATGATTTAATTGAATTTGATTGATGGGATTTGAAATGAATAAATATGATATTGAATGGAGTATAGTAAAATAAATGAAAGTGATTGTGAATTGAATTGGACAGAGTGGTGATTGGATGCAACCTTGTTCCAGGAGTGGGTGGTATTAGGAAGATGATGGAATTAGATTGGTGAAGCATAAGGGGATGAATGGCTACAACGTTGGATCGGTTTTCCATATGTGTTGTGTGGTAGCATAGGCCCGTGACCACCTGCACCCGACCCAAGTTCACCACCACTCATCACTCCCCAATAATAGCAACACCTTCTGTCGTCACTCTTTACGCTCTTACTTCCTCCACGTCTCCTTTATGCTTTTCTTTTCTAGCTAATTCATGCACAGTACAATACCCCCTATCAACCTTTTCATAAACTCTTCAAAAATAAAACCCACATTTATAACACAATTATACAAAAGCTGTGATCTTACAGATTCAATTTATTTCGAATTACCAAAGGTGCATTTTGATTTACATAACTCCAGTGAATGTCACCTTTAACACTTGGGTTAACTGCGTACTGTTTAGGCCGCAAGTACAGTGTGCACACACCATGTGCCATAGAAAGAGAAAACATGAAGAAATTAAGTAGCTAGTCCAGCGACTTCACGAGTCACAACCAAGTCAAGCACAAACATTTATTGAAGGGTGACTGCTTGAGGAAAAGATTTAGGTAAAGATGTTTAATTGTTGTACTAGAGCGGTTTAGTTAGCCGACACCAGTGTGCCTTTCTTTTCGTTGAAAACTTGCTTCTCTCCACTCCTTTTCTCCCTTTATATCTACTGCCATTCTGTTCCTTCTGTACTTCGCCATCACTCTTTCTCACTTCCACCATCATACCCCTGAACCCCAACAACACCATC


Gene Sequence:
>Vu_06960(-)
ATGGTACAAACAAAGAAGTTCAGAGGTGTCAGGCAGCGCCATTGGGGTTCTTGGGTATCCGAAATTCGCCACCCGCTTCTGTAAGTTCATTCCATTATTCCTCCAGTACATTTTTTTTCCACAAAACCCCTAAATCTTAACCTTCATTCGCTAACAAAACACTGTTCTCTTTTATTTTTCTTCATCAAACAGTAAGAGAAGGGTGTGGCTGGGGACATTTGAAACGGCAGAAGAAGCTGCTCGAGCCTATGATCAAGCTGCTATTCTTATGAGTGGCAGAAATGCTAAAACAAATTTCCCAATAACTCAAACCCCTGAAGGTGATCCAAAGAGCATTACCAGTGAGGACACCCCCTCCTCCACCTCCAAGGATCTGGAGGAAATCCTGCATGCAAAGCTTCGAAAATGTGGTAAGGTGCCTTCACCTTCTATGACCTGCTTGAGGCTTGACACAGAGAACTCCCACATTGGAGTGTGGCAAAAGCGTGCCGGGAGACGTTCGGATTCAAATTGGGTCATGACGGTTCAGCTGGGAAAGAAGAGTACCGACAATGAGACTCATCAAGCCGATAGTAGCACTTCTCTTTCTCTACCTTCTTCCGATCACCACCACCACCACCACCGTGAGTCTCCATCGGGTGTGACAGGTCATCATCATCATGAAGAAGTGGTGAGAGGAGAGATTGATGAAGAAGAGAGAATCGCCCTTCAGATGATAGAGGAACTCCTCAACGACAGAAACTGCCCTAGTCCTTCATTCAGCAACTTTCAAGAAAGGGATGGTGGTGATGATGACACCTTTTTTCTTTAA