Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_06969 LG1 100730467 100734389 PREDICTED: axial regulator YABBY 5
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of shoot apical meristem development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, abaxial cell fate specification, abaxial cell fate specification, cell fate commitment, polarity specification of adaxial/abaxial axis, regulation of leaf development, regulation of leaf development, cell fate commitment
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding
SNP Position Effect Amino acid change
A/G 100730890 intron_variant
C/T 100730891 intron_variant
T/G 100731004 intron_variant
T/A 100731226 intron_variant
G/A 100731331 intron_variant
G/A 100731339 intron_variant
T/C 100731340 intron_variant
G/A 100732185 intron_variant
T/C 100732186 intron_variant
C/A 100732193 intron_variant
G/A 100732296 intron_variant
A/T 100732569 intron_variant
C/T 100733063 synonymous_variant p.Leu34Leu
G/A 100733069 synonymous_variant p.Ser32Ser
G/A 100733627 intron_variant
G/A 100733636 intron_variant
G/T 100733769 intron_variant
T/A 100733986 intron_variant
A/T 100734367 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_06969.1
MTTCGIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQGPGHCNPEYRIDTGSTSKCNNRIAMRPPPTIVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLDSNNQAKMENVSEKHLMSRAALMNK*


CDS Sequence:
>Vu_06969.1
ATGACAACCTGCGGCATCGATGTTGCGCCCGAGCAACTCTGTTACATCCCCTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAGCCTGTTTGACATTGTGACCGTTCGATGCGGGCACTGCACCAATCTATGGTCCGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGGACCCGGGCACTGCAACCCAGAGTACAGGATTGACACTGGCTCCACCTCCAAATGCAACAACAGGATTGCAATGCGTCCACCCCCCACTATTGTAACTGAGGAAAGGGTTGTCAACAGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTTATAAAGGAAGAGATTCAGAGGATCAAAGCCAATAATCCTGATATCAGTCACAGAGAAGCTTTCAGTACAGCTGCCAAAAACTGGGCACATTTTCCCCATATTCACTTCGGGCTGATGCTGGACAGCAACAACCAAGCTAAGATGGAAAATGTTTCTGAGAAACATTTAATGTCAAGGGCTGCGCTAATGAATAAATGA


Promoter Sequence:
>Vu_06969::LG1:100734389-100736389(-)
AGAAAAACATAAACATGTATTGTAAAAATCTCTGTAGTGTTTAAGAGAGCAGTATAGTATTTAATAGTAAATTTTTGATCGCCCCCCTCGTCCGCTGTGGAGTTGCAGGTTTGTCTGAGAATGGAGTGGTCACTCTCAATCTATCACAATGATATAATATATCTTATTATATTGTACAGATTTGGTAATGCAGCCAAAGCCTTTGCTTTGTGCTGAACTTTTGATGCTTCAATACACTGGACTTTATAAAATTCTATATTCAATGAAAATTACTTCAAACATTGTTTTTTCAGCCTCAAAATTATTATAGTAAAAGTTTATATTCTATATTTAACTGCTTATTTGTGACTCACTACACTGCTACATGATTTTTCTCTTCACAAACCATCACTTATCCTTATTAACATTTATAGATTTTTTTTTGTTTGACCACTAAATTTTTATTATATTGCATTGCAGAAAAGGTAAACTTAAAAGTAATACATAGCCTTTTTATATATAGGTGTCACGAGTTACAACAAATCCAGACCTACACGAATATCGTTAATCTAATTACTCAAAATAGAAGTCCACAAATTACAATTCTATTTTTTTATACCCTATCAATATGTATACTGATTTTACAGTTGTCTCTATCTTTCTTTATTACACAGAAAATTAACTTGGTTTCGCTGATTATTCTGAATAGGGTTCCAACTTTGAATTGAAGTGTATAAAAAAATGTTGTCTCGAGTTCATCAAATATACTTGTATGTTTTAATTATCTTTAAAGAAACATAATCATCACCTATATTTTATCTTGTTTAATTCACCCAAAAAAGAAAGAGGTTTATGTTGGTTAATAACAAATTAGATTTAGAATGTAGTATGTTTATGCATATTTTGGATTTTCAACAATTTTTTTCTTATTATATTTCTAGCCCTATATTAAGCTCTATTATTATGAAGGGAGAAAGAAGTAGCCTGTTGATTATCTTGTCTGACACATTGTAGCATGATCTAGTTGAATTATAGTATCACTTCCTCCGTTTTTATTTTGTGTTAATTATTTTTTTGGACAACTAGTAAATACATACAAAAATGATTTTCAAAAAGTGTTTATAAAATTTTCTATTTTATCTTTTTTATTTCTACTGTATATATAAATTAATCATAAATTAGGTGAATGACAAAAATATAAATAAAAAATTAATCAATATTACTTTGAACTTTGAATTAAATAAAAATAAAAATCTTTCAATATTACAACACTTAAAAAAGGAACAAAAGAAATAGATTTCAGGTTTGTTTTAACTGTATTTTAGATTTGATGAATGTGAGATCGTGAACATGATTTAGGATAAAAAGATTAATACTGTTTAGTGCTTTTTTTTCCCTTGTATGTACTTGTTACATTTTATACTTCTGAATTGACCATGTATGATGTTATTTGTCGGAGTAGAGTACCTTTCACTTTAATTCCTAATACTCTTTCTGGTCCTTTCTAGAAAAATCCAATTAACTAATTTATGCAAGTAAACGAGATAATTGGTTCATGATATTAAATGTCTTACGTACTTATTTTTGAAAATAAAAACAACATTTAAAATTAATTTATTCCCCACCAATTACTTATTGATCAAAGAGGAACACTTTAGTTAAGTGTATTCTTTAAAAAAAAAAATCAATTCATGATATTTTGATTTTGGCAAATAATAATATTGGAGAGTTGGAAAAAAAATAGAGTTTTTGCAAAAATAATTATTGAGCAGTGGAGCAAGTTTTCCAATATGAACTAAAAAGCAGTTTGTTTTCCTTTGACGGACCCAGCATTCCCTGACTGCCGTGGGCACTACTAAAACTACTTTTTTACTCTCTACTTCCTCACTTCTCTTTCTCTTTCCTTCGGATTCCAAACAACCCCTTCTTCTACCTCTCTCTACTCTATTTTATACAACCTTTTCCTTCTGTTTTTACTGTCCTCATATACTTATATATACACACCCCATACACAGCTCACT


Gene Sequence:
>Vu_06969(-)
ATCCAACCAAGGGAGGGTTTTCTGAAAGAGAGAGAGAATAATTAAAAAGGCCTTTGCCTTCATCTTTGCTATTGCAAGAGAGAAGGACCAGCTATTCAATTACCTTCATCCATCTTCTACTTCCTTCTTTCTCTCTTTCTTCTTCTTCTTTCACCCTCCTTCTTTCAAGAAACTCCAGATCAGCCATGACAACCTGCGGCATCGATGTTGCGCCCGAGCAACTCTGTTACATCCCCTGCAACTTTTGCAATATTGTTCTTGCGGTATCTTTGATTTCAAAGCTAGCTTTTATGATTTCGTCGGAGATCTGCTTTTCGGCTCTTGCATGTTACCTAATTCATACAATATCTTCTTGTTTTCAAATGCCAAACTATTGTATTTTACAGCACGCACACACACACACACACAGTACACATACTTGGTTGGTTTCTTTTGCCTCTTTCTTTTCCTTCTTCTGTACACATCCAAGGGCAAAATAATTCAATCAGATCCTGAAAAGAAAGCTACCACTATGCGTGTGTTTGTGTGTGTTTGCGCTTTTGTGAACCAGTGGGTGTGCTGTTTTAATTCCCTCTTTCTTTCTGGGTTCCTAGTTGTTGTTACAGTCATGTCTCCATCTCCGGACTTTTCCTTTTCTCCTTTTCTTTTCTTCTTCTTTTGCAGTCAAATAAAAGTCATATCTGGAGAGGACCTCAAGAAGGTCACACACACACACAAAAACAAAACCATACACACACGGTGTTTTCCCCTTCCCGTTCTGAGCAAGTGCGGGTGAGGCTAATTGTGCCAACTGTGCTAGCTAGCTAGCTGTTTTGAGAAATATTGTAGTTTCCTCTTGAAAACGCCAAAACAGGCACTATATGTTAAAACTGTTGATAGGACAAGTCCTCTCCACCCTTTGATTTCCTATCTCTAACCTGTAACCTAATTGACCTCTCTAGCTTCTGCTAAAATCAACTTCTTCTGAACTATACATCCAGGTGCTTTCTCATGTTTTTAAATTGGAAAACAAAAATGTAAATCTCTTCAGGAGTACTCCCAGTTCTAACATACGAGAATAAACCCTGGATCGTAGCATCTTTCAAGTTGACAAGTTTTCTTTCTTTTTCGAGTAAAACCAAGCTGCACCCTTTTCCTCAAAACCTCACTTCTCAACTTACTTTTTTTATCTTTAACGGGATGAGATGATCTGAAATATGAAATAATTGCGTGATCTAGTTTAATTTATTTTGTTTTTCATTCTCTGGGTGTTTAATCAACTTTCCTCCTTGTATAATGGAATATTATTGTGTTATGGACACAGGTGAGTGTTCCATGCAGCAGCCTGTTTGACATTGTGACCGTTCGATGCGGGCACTGCACCAATCTATGGTCCGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGTAAGGTGCAATATAATAACACATAAATGCCACGTTTTCAACTAATTGGTACTTGATTTTGATGAATACTCGCAAGTACTAACATAACACAAATATAAATAAAATAGCGTCTTTGATTTCTGGATCCTAGGGTAGGGTTTGTGGGAGTTATTCCTTTTGACAAAATCGAAGCCCCTCTGGTAGGTTCTGTGTGCTAAATCGAGTATTTCAAAGCAAGCATGTCTGTTATTTCTACCTGAGAAAGAGTACTGAAAGCCCTAGCTACCTGCAGCCGCCATAAGCAAAACCTATTCGTTTTCTTTTTTGCACTTTTAGTAGAGGCGTCAGGTTCTGTCCTAACCCATCAAGGCAACTGAAAATCTATCTATCTCTCTCTCTTCATGGCTTTTTGAGATGATATACTTTGGGTATCGATTTCATCGACATGTATCTATGTATGTATATGTGGGAAATATGTTATGTTAGCCATAGCTAGGTTTAATGATTTCTTTTCAAGATCCTTGTCGTCTCCAAGGCAAGCACACTCCTGTGGATCGGATGACTCGATTCTCAATTTTTAAAAAATGGTATCTTGCTCGGTGTAAATCCCTAAAATCTAAGCCCTTCATTTCCACAACTGTCAATCTGGGTTTTCTGTAAGTACTTTCATTCATCTGATTAGTTGCATTTCCTGTCTTATTGCTCAGTGATATTAAAGGCACTTTCGTTTCTCTCTATGAGAGGCCATCATTATTTCTTCACGTCTGAATCACAGTAAACCCACATTTGCTGCTGCCAGATACCTAGTCAGTTAATTTATTCACCCCATTTTTATTTCATGCAAACTAACTGGTCCCCGTCTGGTTTTTACACTCAAATTACTTTTCAAATATTTCAATATAAAATCTACATTTTAATCTATATTTATTTTTAAAAAAATAACATTTAACAGTAAATTTAATGATTAAAAAGCAAAGAATTCTTCATGTTTATTATAAGTCATCATGGTGCCACCACTTTAATTGTATGGCTAAGTTTATCTTCCAAGCTTATTATTAAGATTTTCATTTGCAGGGACCCGGGCACTGCAACCCAGAGTACAGGATTGACACTGGCTCCACCTCCAAATGCAACAACAGGATTGCAATGCGTCCACCCCCCACTATTGTAACTGAGGAAAGGGTTGTCAACAGGCGTGAGTATATATCTATATATACATATATTAGGCTTTACCAAGTTTAATATTCATTCTCAAATTCATCATAGCCACACATATGGAGCCACCTAGTTTCCTTAAATAAAATAAAATATCCACATTGTCATTGACGATATTGATCTTATCTGAGTTGTTATTTTCTTTTCCAGCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTTATAAAGTAAGTAAAACTTTACGAATAATTTTACTGTATATATAAGATGTAATTGGTTGCATAAAGCACTTTGAAACGTCTTTGTTCTTACGCAGGGAAGAGATTCAGAGGATCAAAGCCAATAATCCTGATATCAGTCACAGAGAAGCTTTCAGTACAGCTGCCAAAAACGTAAGTATCAGATAAAAATCGCTGGAATTATTTTACCCTATTTTAATATATATCTTCTTGATAACTATACTTAATTACTGAATTTTCTCTTTTTAGTGGGCACATTTTCCCCATATTCACTTCGGGCTGATGCTGGACAGCAACAACCAAGCTAAGATGGAAAATGTAAGTACATACACAGAAGCAATTTTTTTTTTTATCAGTAAAAAATAAATGAATAAATATAGAACACTTATGAAATACTCTAACCCTTTTTCAAAACATTCACATAAGCAAATATTTCTATTTACATCACTTATTTCAAGAGACAATAGTTGTGATCCTCCGTAGCAACATATTTATTTCATGCTTTTCGATTTTTCTATTAAAGAATATAACACTTGGCAAAAAACTATATCAACAGAATTAATATTAGCTTTTAATATAGCATCAACGTTTTAACTGGAGAAACAGAAAATGAGTGAATCTGAAAAAGATAAATAAATAAAAGAAAGTGTTAAATTATTAAGTATGGAACGTACTCTTGTTTAAGGATCATTGCTACAAAACATTGTTTGATGAGATGATATTTGATTTCAGGTTTCTGAGAAACATTTAATGTCAAGGGCTGCGCTAATGAATAAATGAAAGCTATCTTCATCATGATATCATACTATGGGTCCTGAGTTTCGTTTGAATCTGTCAAGAAAAAAAAGTCCAACCTATTATGAGTTTTAAGGACATCTGCACTTTTCTTTTGTTAATGTACTTGTCACTACTTAATTACTACTTGTTCAATGGATGCTTTAATTTCAAGCAAGAATGTTAGTTTCCCTTATCATCTTTTAATAACTTATATTTTCTACCTGTTTAAAATCAAGTATAAAACATATATACTTGATCTTCTTGAGCTTATATATGTATAATCCTTTGTTTGGAGCACAATATATTGACATTTTCTTT