Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07300 LG1 104460726 104463480 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   recognition of pollen, recognition of pollen, recognition of pollen, innate immune response, protein phosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation, innate immune response, protein phosphorylation, recognition of pollen, innate immune response
Cellular Component   is active in   plasma membrane
Cellular Component   located in   chloroplast, chloroplast, chloroplast, chloroplast, chloroplast
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, calmodulin binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
C/A 104460811 missense_variant p.Arg273Met
C/A 104460902 missense_variant p.Asp243Tyr
C/T 104460903 synonymous_variant p.Ala242Ala
G/T 104460911 missense_variant p.Pro240Thr
C/T 104460981 synonymous_variant p.Arg216Arg
A/T 104461084 downstream_gene_variant
A/T 104461110 missense_variant&splice_region_variant p.Asn199Lys
G/T,* 104461115 missense_variant p.Leu198Met
A/T 104461118 missense_variant p.Ser197Thr
T/A 104461211 downstream_gene_variant
A/T 104461303 downstream_gene_variant
A/C 104461405 downstream_gene_variant
T/G 104461406 downstream_gene_variant
A/C 104461470 downstream_gene_variant
T/C 104461472 downstream_gene_variant
G/A 104461545 synonymous_variant p.Arg180Arg
C/T 104461611 downstream_gene_variant
T/G 104461708 downstream_gene_variant
A/C 104461773 downstream_gene_variant
T/C 104461866 downstream_gene_variant
C/T 104461894 splice_donor_variant&intron_variant
T/C 104462543 intron_variant
G/T 104462658 missense_variant p.Pro107Gln
C/T 104462664 stop_retained_variant p.Ter105Ter
T/G 104462973 intron_variant
A/C 104463028 missense_variant p.Cys60Gly
T/C 104463034 missense_variant p.Ser58Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07300.1
MPRRVLQVTAQEPPSSSVALKASVSRYDPGIFFFLGGTVLLIILLILLFIFWRRTKGPANVNTTLTCQQHGKYIEPREVMKMMVPNIQPGQMEFISGNLRTISYFDFRTLSRATKNFHPRNLLGSGGFGPVYQGKLADGRLVAVKTLSLDKSQQGEKEFLAEKMKSVTVIGENQAYLSTQFAGTLKNTDLTLPSEMQYLPEYAWKVYEKSMLMEIVDPRLREHGMEEKDVMQAFHVALSCLQPHADLRPAMSEIVALLTFKVEMVAKPIRPTFVHRRRVMDDENHSWGAISSSEPSTTAVASL*


CDS Sequence:
>Vu_07300.1
ATGCCTCGGAGAGTACTTCAAGTGACTGCACAGGAACCTCCTTCATCCTCTGTGGCTTTGAAAGCCTCCGTTTCACGCTACGACCCTGGAATCTTCTTCTTCCTTGGGGGGACTGTGTTGCTCATCATATTGCTCATTCTTCTGTTTATATTTTGGAGGCGTACTAAAGGGCCAGCAAATGTGAACACAACTCTAACATGTCAACAACATGGGAAATATATTGAACCGCGTGAGGTGATGAAGATGATGGTCCCAAATATTCAACCAGGACAGATGGAGTTCATTAGTGGAAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGTAGAGCCACTAAGAATTTCCACCCTCGAAATCTGCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGGCAAGTTGGCAGATGGAAGGCTTGTTGCAGTAAAGACATTGTCTCTTGACAAGTCTCAACAAGGAGAAAAAGAATTTCTGGCAGAAAAAATGAAGTCCGTCACAGTTATTGGTGAAAACCAAGCTTATCTTAGCACTCAGTTCGCTGGAACATTGAAAAACACAGACCTCACTTTACCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAAGTTTACGAGAAGTCAATGTTGATGGAAATAGTGGATCCAAGGCTGCGAGAACATGGCATGGAGGAAAAGGATGTTATGCAAGCATTTCACGTGGCCTTATCGTGCCTTCAGCCACATGCGGATTTGAGACCTGCGATGTCAGAAATCGTAGCATTGCTGACATTCAAAGTTGAAATGGTTGCCAAGCCGATCAGGCCAACCTTCGTTCACAGGAGGCGCGTAATGGATGATGAGAACCACTCTTGGGGAGCCATATCCTCCTCCGAACCTTCCACAACTGCAGTGGCATCATTGTAG


Promoter Sequence:
>Vu_07300::LG1:104463480-104465480(-)
TCGGTTGAAATTTGTTTAACTTCATCAATTACAAAATAGTCTCACAAAGATCAATAAAATCTCAATAAAAAAAATAAGGCAATGATGCCCTGTCCTAGTAAGCCAAGTTGACAACATTTTAACCGAGTACGACCCAACAACACTTATCAAAGTCTAAATAATAAAATTATTAAGAGGTGCTACTCCACCACCACAACTTCCTTCCTCTACCACCCCATTCCCCTTTTATCTTTTTCTTTATTTTTTCATTTCTATTTTACCCTTATTAAAATTTCAGGATTAATATTATTTAAAATCTCAAGTGGACATTCATTCTCTTTATCATTCTTCCCTCTTTCTCTTTATTATTTTTCTCAGATTGTCTCTTAAGTTCCACCACTACTTTGGGTTGTCTCTCATATTCCATTTTTTCTTCTCTTTTATAGAATTGTGACGTGTTAGTAAGATTGAAAGTGGGGAAAACAATTCATCTTCAGCCGTGAGTGTGGTGGTGCTTCAAGGTGCTGGTTCAGAGGCGTGAAAGGTTCAGAGGCGTGAAGGTGCGTAATAAAACCCTAAAATATAAACCATGTGAGCATCCGTCAACGGATGTGAGCATCCGTCAACGGATGTGAGCATCCGTCAACGGATGTCGACATCCGTTTTCCCTTAAACGGATGTGGACATCCGTTTAAAGATTATACGGTTTATATTTTACAGTTTTTTATATTAATTTTGAAGATATTTAAATAATATAATTTATATTTTTTGATATATTATTTTTGAATATATTTTGATGTATTTTAATAATGTATTTTTGAGGATCTTTATTGTTATTAGTATACACCGCCGAACCCGCTAAAGGAGGAAGAAAACTGATATGGAAGAAAAATGGAAGATGAGAAACGAATATGATGAAGTTTGGATGAGAATCTGAAAGGGTTAGGAGGTGGGTGAGAAATGATAGAAAGATAGATTTTAGGGTTAAAGTAAATAATTATGATTAAAAAGTAAAAAGGTTATTTTTGTAGTTATAAAAGGTTAATTTTGTAATTCAAAAAATATGTAATAGGATTGGAGAGGTAGAGGGAGAAAATGTGATGGTGGAGGGAATAACACCCAAATTCTTACTAGAGTTTGATTGACAAAACCTTAATTGAACTTGAGAAATGGGTTCAGAGAATTCAGACCATGAAGTATATCCTCTTATAATTCAATTTTTTTTTTAAAATTTTGTACCCAAATAAAATATTTAGTTATAGAACATTTTAACTTCCGTCCAATACAAATGAATTATTATGTAAAAAATTTCCAATGCAAAATATTATAAGAGTCTAAATGAAGAAAGAAGGGTAGAAGGGATTGAGCAATGAGCTAAAACCGAAAAGTAAATCAAAAGTATTTTTCTTTCAATTATATAAAGACATGGTGGGACCTTTGATGGGAAGAAGAAACCACGGACACAAAGTGACAAGTGGAAACGCAAGACGGCATTAGAAGTGAACAAAGAAGGAGTGAGAATGTTACACATAAAAATATAATTGAGAAGCTTTCAAAGTGAACTGTGATGTCTGTTACATACATACAATGAGTAGAGCTGCCACAACCTGTCATTGTGATGGAGAAAATAAGAGAAAATCCCTCTCATTCTTATTATTTATTCATTACTTAACAATCACACAGTACACATATTTTTTCATTCAATCTCTGCATTCGACCGCATCTATTTGTATTTGCCTCCAATTCAAATGTCTGACAAAATTTTACTCTTACTGTTGCATTGTTTCCATCAATTCTATGGGAAGCCCTTGCAAACTATACAATGCTTCTCCAACCTTCTCTTTTGTTTTTTAACATAACAATTCGATACAATAACAACAACAAAAACAAAAAATTGCTATATACAAAACCAGATTGGAAAATGGTTGCTGTTGCCAGTTGTTGAACTTAACCCTTCATATTTGGCCATGACATTATTGACCAAAACTGTTGAATCAGAATGCTTTCTTCTGCCCCAAAGA


Gene Sequence:
>Vu_07300(-)
ATGCCTCGGAGAGTACTTCAAGGTTTCACTTTATGATCTCAAATTGTATTTACCACCTTCGGAAAGTTAGTTATTTCGTTTTCCATACGTTTTCAACTGCATGACATAATGTAAATTCATGAATTATGTGCATATACATTTCAATATAAGCTTGAGAATAGGTATTACAAATGGAGTTTAATATTGCATAAAAGGTTGTTAATATTGCATTTGGAATAGGATGCATAAAAGGGTTGCTTTAGCTTTCTTAAATTTTTCAAGTTCTTTTTAACAACGATGAAATCCTTTGACACAGTGACTGCACAGGAACCTCCTTCATCCTCTGTGGCTTTGAAAGCCTCCGTTTCACGCTACGACCCTGGAATCTTCTTCTTCCTTGGGGGGACTGTGTTGCTCATCATATTGCTCATTCTTCTGTTTATATTTTGGAGGCGTACTAAAGGGCCAGCAAATGTGAACACAACTCTAACATGTCAACAACATGGTAAGTTGAAGAAATCATAACATATACAAAGCAAAAGTTATCTACATACCTGCAACATATTTGGTTAATTTTTTTGACAGTGTGCTTATAATGATGATACTTCTGTTATTTGTTCTTGGCACTTACCAAAGGGAAATATATTGAACCGCGTGAGGTGATGAAGATGATGGTCCCAAATATTCAACCAGGTATTCAAAAGAAAACATAAAACATAAAATGTGAAATATATTTATGTATAGAGTGCAGCACTGTAATGATTCTATTGAAGTTCGTTTGTGTACACAGGACAGATGGAGTTCATTAGTGGAAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGTAGAGCCACTAAGAATTTCCACCCTCGAAATCTGCTTGGAAGTGGTGGATTTGGGCCTGTCTATCAGGTATAGGTACTAAATCTTGTGTCATTTGCTTTGATACACAATTTCATTTGTTAGTTTTCGGAACCTGATCTCTTAATCATGATTCAACTGTTAATATGTGAGTGCTGAAGGCTTGAATAACGAATAATAAATAGAGAAGTTTTAATAGAGATTGTGTAAGTAACACTCTCCTCGAGAGCTTTTCAGTTCTGAGTCATTTATGAAGGGCACTAAAAGCACTCGTTAATATTTTTCTCTCTGTTATGGATTCAAATTTTAATAAGGCAGTGGACAACTTGTTGGAATTCATAATAATGGGGGTGTTAGAGAAATCGTGTTTGGTGGTTGAGGCTTGCATAAATGAGTGTACCGCTGCTCCTGTGTGATTAGTATTCTGAAATTCAATTGTTTTGACAGGGCAAGTTGGCAGATGGAAGGCTTGTTGCAGTAAAGACATTGTCTCTTGACAAGTCTCAACAAGGAGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTCTCGGATGCTGCACAGATGGGCCTCAAAAGATACTCGTGTACGAATATATGAAGAACAGAAGTTTGGACCTCATAATTTATGGTATCTCTGCTTTATTACTGTCAGCATGGTGTGTTTATTATATAGAAAATGAAGTCCGTCACAGTTATTGGTGAAAGTACTTTCCTTGAACCCGAGCATGTAGTATGTGTATACCATATCCAATGGGTCATGAGCATTTGAAACAACTGAATAGTCTGAAGTTTTTAAAAAATAACTCGGACTTTGGATGTCTGTTTTATCAGGAGGGAGTGATCAATTTCTGAATTGGAACACTAGATTCCAAATTATTCTTGGTGTAGCAAGGGGATTGCAGTACCTCCATGAGGATTCGCATTTAAGAATTGTTCACCGAGACATCAAAGCTAGCAACATTCTTCTTGACGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACTCAGTTCGCTGGAACATTGTAAGTCCTCTATGTTTGAAGGTACCACATTAATTGTCGGCCTAAATTCTTGGAACACAACTTACTTATGTGCGTTAGGTAACTTCACCTAACATCAACTATAAGATAAAAACCAGCTTACTATAAAGTATTGACATTTTATTCAAATGAAACTCCTCTAGAGCATTGATCATCACTTTAACGTATCATTTGGCAGCATACTTTTGTATTGAACATCTAAAACTCTTTGAGGTTTTTAATGAACATCATTCTTGACTTTCTTGTCATTTTTTGTCAGAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAGTTGTCCGAAAAGGCAGACATCTATAGTTTCGGAGTTCTTGTGCTTGAAATCATCTGTTGCAGGAAAAACACAGACCTCACTTTACCATCAGAAATGCAGTACCTCCCTGAATATGTAATCTCTCAGCTTGTTATAACTACCGTATTATTCTCCGAGATGCTTGTATAAATTAATGTTAATTACTTTTCAGGCATGGAAAGTTTACGAGAAGTCAATGTTGATGGAAATAGTGGATCCAAGGCTGCGAGAACATGGCATGGAGGAAAAGGATGTTATGCAAGCATTTCACGTGGCCTTATCGTGCCTTCAGCCACATGCGGATTTGAGACCTGCGATGTCAGAAATCGTAGCATTGCTGACATTCAAAGTTGAAATGGTTGCCAAGCCGATCAGGCCAACCTTCGTTCACAGGAGGCGCGTAATGGATGATGAGAACCACTCTTGGGGAGCCATATCCTCCTCCGAACCTTCCACAACTGCAGTGGCATCATTGTAG