Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07601 LG1 107285041 107285619 agamous-like MADS-box protein AGL62
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of transcription by RNA polymerase II, endosperm development, endosperm development, endosperm development, positive regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, positive regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, endosperm development, regulation of auxin polar transport, positive regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II, regulation of transcription by RNA polymerase II
Cellular Component   located in   nucleus
Molecular Function   enables   RNA polymerase II cis-regulatory region sequence-specific DNA binding, DNA-binding transcription factor activity, RNA polymerase II-specific, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, protein binding, protein dimerization activity, DNA-binding transcription factor activity, RNA polymerase II cis-regulatory region sequence-specific DNA binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_07601.1
MENPSFPLGMNNQNFSSDIDAFKQQKKKAGRKKIEIKKIEKSSNKQVTFSKRRTGLFKKASELCILCNVNIAIIVFSPAEKLFCFGHPDFEGIVESYLKGSKVFDPPESRERSVSYEECNKQYEEAMKKLELEKKNLRETETLANKGCNRRWWEDPIDQMSQSELEQFMVSVYELRRKLAERGGELLMQSMI*


CDS Sequence:
>Vu_07601.1
ATGGAAAACCCTTCTTTTCCTTTAGGCATGAACAACCAGAATTTTTCTTCAGACATTGATGCGTTTAAGCAGCAGAAGAAAAAGGCAGGGCGGAAGAAGATCGAGATAAAGAAGATCGAGAAGTCTAGCAACAAGCAAGTGACATTCTCAAAAAGAAGAACAGGGCTATTCAAAAAAGCGAGTGAACTCTGCATTTTGTGCAATGTCAATATAGCCATTATTGTGTTTTCTCCTGCTGAAAAATTGTTCTGCTTCGGTCATCCAGACTTCGAGGGCATTGTCGAAAGCTACCTTAAAGGTTCCAAAGTGTTTGATCCACCGGAATCAAGGGAGAGATCAGTGTCGTATGAAGAGTGCAACAAGCAATACGAGGAGGCAATGAAGAAGTTGGAGTTGGAAAAGAAGAATCTCAGAGAAACTGAAACTCTGGCTAATAAGGGGTGTAACAGAAGGTGGTGGGAGGACCCTATTGATCAGATGAGTCAAAGTGAGTTGGAACAGTTTATGGTCTCTGTTTATGAGTTGAGGAGAAAATTAGCCGAAAGGGGTGGTGAATTGTTGATGCAATCAATGATATAA


Promoter Sequence:
>Vu_07601::LG1:107285619-107287619(-)
TCTCTAACACAATAATTTATTTGACTATTTGAATCATGCCAGAAAATGTTTCGGTTATAATAATTAGATAACTATATTTATAGTTATGTACTATATTATATATCATATATCATATAATATATTCTGGATTATACTATATATTTAACATAAAAATAGTTGTTATAATATCTATTATCAATTAGATATTTTATGAAATATTCATATTTCAAAAAATACTTATCTTGTTGACGACGTCTCACGTGTAGTTTTTACTTTGTCGAAAGTTTCTCGTGTTGATCCGAAATAGTGATGTCGAGACCGAACGCTCGTCTTGGTTTCTTGTGGTTTCTAATAATCTTTCTGGTGCTTTGTTGTTCCTCCATGCTCCTCGTGGTCATCATTGGGTTTGACGCTCGGCCCCACGGTGGGCGCCAAAATGTTTCGGTAGATACTTTTAGGGACCGAGAGACTAACCTGCTGACGCGTCTGGGCCGCTCGCTCGCTTCCAAACTCCTCCTGTTGGCCGATCGGTGTTGGCGCAAACCGATCGGTCTCCTTCTTGACGAGGGGGATGTACCTGCAAAAGGTACTCCGACGCCCAAGTTAGGCGTGTGATTTGAAGAGCCTCGGCTCTTGGTTGAATATTTAGTGAATGGTTATCACTATTGAGTATTTGAGAGTCATGTAGAGTAAGTGGAACGTTTAAGTGGAACGTACCTGGCTTTTGGCCCTGGCTTTGTATTTATAATTTATCTCATGGATCCTGAGCTGATATAAGCCCAATAAAATATAAACAGAATAAGATATAAACAGATTACCTGAATATCCGGTTGGTTGTTTGTAACCACAGGCAAACTACTTATACAACCTATTTATAATTAGCATATCTCCCACATCTTTATAAACATATTTGTACGCACATAAAATAATCAATTTACATAACCACACATTAATTGATATATCAATCATATACAATTGTAGTCTATCAATTATCTCACTACCTAACATAATTAGAATCAATCAAATAAGTCAAATAACAACAATGTCAATAAAATAAAATAAGATAAATTGATTTAGGAAGAATTGACTATTTTATGCAAGATTCCAAAATATCTTAAAATGAGAATAATTACATAATAAATTAATTTAAAACAATTGATGGATATTACCATACTTGAAAAGTAAGACTATTTAGCTTATAGACGATTTAAAAAAATATTTTTTCCATAGGCCTACTGGTGATGGAAATAATATTTTTACTAACATATATTCGAGTTTTGTAGAAATATATAACACGTATAAACTGGAATTAAATTCAGATAAGAGCATATGACATTTTCTTATGCTCACGGAAGATATACCTTAAATATATTTGTTATTTCAAAAAGTATTTATTATTGATTTGAATTATATGTATACCACATATTCTGTTTCCATTAAAGAAAGTTAATCAGTCTAACCTATATTAACCATCAATAAAAATGGTAAATATAGTCTATATTAAAATACGATTATAAAAAATTACTATTTTTATCAACAAGATTGTGTATTCTCAAGATGCTATTAAGTACAAGAATTATTGTAAATTATTCAAATATAATCTTGTTGACTAAAGAACTATACACGCACGTGCCGTAAAGAAAGGAAAAAACTTCCGAAACGAGAACTTGTTTCCCATAAACACAAATATTTTCTTTTTCCAAAACAAGATACCATCATGGTAATTGGAACCAAGAATCTAAATATAAATATATACCTACTTTTTTACAAGAAAATCTAATTATATCTTGATTGATTTATAATTCAAGAAACAGCATGATTGCAGGATTCTGTTATGAGGATAAATCAGCAGTAGGTTATAATAATCAATTTATTATAAATTATAAATTATAAACATATATAATATAATCTAAGACGAGGTAGTGATAATAAGATTTTATTGCAAGAAAGGATAAATCAAGCATGCATCTTCCATTATAAATATTATGCATGAATCGTCTGAAGCAAGGTAATCTTTAGGC


Gene Sequence:
>Vu_07601(-)
ATGGAAAACCCTTCTTTTCCTTTAGGCATGAACAACCAGAATTTTTCTTCAGACATTGATGCGTTTAAGCAGCAGAAGAAAAAGGCAGGGCGGAAGAAGATCGAGATAAAGAAGATCGAGAAGTCTAGCAACAAGCAAGTGACATTCTCAAAAAGAAGAACAGGGCTATTCAAAAAAGCGAGTGAACTCTGCATTTTGTGCAATGTCAATATAGCCATTATTGTGTTTTCTCCTGCTGAAAAATTGTTCTGCTTCGGTCATCCAGACTTCGAGGGCATTGTCGAAAGCTACCTTAAAGGTTCCAAAGTGTTTGATCCACCGGAATCAAGGGAGAGATCAGTGTCGTATGAAGAGTGCAACAAGCAATACGAGGAGGCAATGAAGAAGTTGGAGTTGGAAAAGAAGAATCTCAGAGAAACTGAAACTCTGGCTAATAAGGGGTGTAACAGAAGGTGGTGGGAGGACCCTATTGATCAGATGAGTCAAAGTGAGTTGGAACAGTTTATGGTCTCTGTTTATGAGTTGAGGAGAAAATTAGCCGAAAGGGGTGGTGAATTGTTGATGCAATCAATGATATAA