Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07647 LG1 107764636 107765670 PREDICTED: ethylene-responsive transcription factor ERF086-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   flower development, bract development, floral meristem determinacy, floral meristem growth, floral meristem growth, negative regulation of lateral root development, floral meristem growth, bract development, negative regulation of lateral root development, floral meristem growth, floral meristem determinacy, floral meristem determinacy, floral meristem determinacy, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, bract development, lateral root morphogenesis, bract development, regulation of transcription, DNA-templated, lateral root morphogenesis, regulation of transcription, DNA-templated, negative regulation of lateral root development, floral meristem determinacy, lateral root morphogenesis, floral meristem determinacy
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
A/G 107764975 synonymous_variant p.Asn232Asn
G/T 107765245 synonymous_variant p.Thr142Thr
C/T 107765458 synonymous_variant p.Arg71Arg

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07647.1
MSTSRTSDTPFKGYDPNQTQMCLSLLQRNTSPSGERRGRRKQAEPGRFLGVRRRPWGRYAAEIRDPTTKERHWLGTFDTAQEAALAYDRAALSMKGNQARTNFVYSDNINFHTILSPADVQVQLQLQPLLPPSQFLSNTTHTKQPNNQNSLPKVVHTSNTGNPSPLNNDAFVEIETTYGSADQDDSFFFSSDSNSGYLECIVPDNCFRPASSKTNSSNSRKSNVSDQKANTNSSESTNHHEQYYYSQEMAGMASNFSEFCYPSEVMSQGSWDDQQSWDWNCSELSAIFKNPLRVENGCMDALYPMSDDQSPSPSYGVMNECASSTTCSPSLPPFGDVDLGYPLF*


CDS Sequence:
>Vu_07647.1
ATGTCAACCTCTAGAACCTCAGATACACCCTTCAAAGGATATGATCCCAACCAAACTCAAATGTGTCTCTCTCTTCTCCAACGCAACACATCTCCTTCTGGTGAGAGAAGAGGCAGAAGGAAGCAAGCTGAGCCAGGAAGGTTCCTCGGGGTCAGGAGGCGTCCTTGGGGTCGATATGCTGCTGAAATCAGAGACCCCACAACCAAAGAAAGGCATTGGCTTGGCACTTTCGACACTGCTCAGGAAGCAGCTCTTGCTTATGACAGAGCTGCTCTCTCCATGAAAGGAAACCAGGCAAGAACCAACTTTGTTTACTCCGACAACATCAACTTCCACACTATACTTTCTCCTGCCGATGTTCAAGTCCAACTTCAACTTCAACCTCTCCTCCCACCTTCACAGTTCCTCTCTAACACCACTCACACCAAACAGCCAAACAACCAGAATAGCCTCCCCAAGGTTGTCCACACTTCAAACACTGGAAACCCCTCCCCATTGAACAATGACGCCTTTGTTGAAATTGAAACCACGTATGGGTCTGCTGATCAGGATGATAGTTTCTTCTTTTCCAGTGATTCCAACTCAGGCTACCTTGAATGCATAGTTCCTGATAACTGTTTCAGACCTGCTTCCTCCAAAACAAACAGTTCAAACTCCAGAAAGAGCAATGTGAGCGATCAAAAGGCTAACACAAATTCCAGTGAGAGTACTAATCATCATGAACAGTACTACTACTCTCAAGAAATGGCAGGAATGGCCTCTAACTTTTCAGAGTTTTGTTATCCAAGTGAAGTCATGAGTCAAGGATCATGGGATGATCAACAGTCATGGGATTGGAACTGCAGTGAACTTTCAGCCATATTTAAGAACCCATTAAGGGTGGAAAATGGGTGCATGGATGCATTGTACCCGATGAGTGATGATCAGAGTCCAAGTCCAAGCTATGGAGTAATGAATGAGTGTGCTTCTTCTACTACCTGTTCTCCATCACTTCCACCCTTTGGGGACGTAGACTTGGGATACCCACTCTTCTGA


Promoter Sequence:
>Vu_07647::LG1:107765670-107767670(-)
TTTGACTACACCCTTTTAATATTGGCTTTTGGAGATCAGAGATAGTAAAGGTGATTAACAAAAAGGCATTTTTTTTGTTATCTTTTTCAATTTTATGCCATTAGTCATTTCCTCCACTAGCCTTAAAACTCTGCAGTGTAGATTCATAAGTTAAGTTCATCTCAGCATAAACACGACTACCACCAAAAATTGTTATGATCTGTGTAATACACAGTTGTAAGTATCCCTGAAAAAGGTCAAAATACAAGCATAATAATGCAGTTTCATAATAAACCGAAATCTTCTGGAATGTTGTTCAAGGATGTGAAAACTGAACAGTGTAAGTTAAGTGAAGTTGTAATTAATTCCCCATCCAAAACCCTCGGATTTCCAAATTCTAGTTCAGTAATAAAAGAACTGATCTACAGTTTTATCTAAGAGGTTTAGCTTACCTGACTGAGTCACATAATCATAACAGGGCACTAAGCTAAGACCATGGTCAACAGCTATGATCAGTTTGGCCCAAATAAACTCTTGTACTGGAATTAGAAATTGTACAGTTGAACTGCCAAAAAGAAAATGGGAAAATCTACTATTTGGATGTGAAACATGATGTGCATATATAAATATAGAACAAACAAAGTTAAGAGTTTGTCTTGTGGGCCATTGAAAAGGGAACTTTTTAATTTTGTAATCGAGTGTGGGGTTGTTTCCATGACACAAGACAGGGAAGGCTCAGACAATATAAAATTGTTTGATAATTTTGTGTGTAGTTAGAGATGATTTTAACTGCTCCCTTTGAAAATCATGAAGCAAACAAGAACCTCCGATGTAATTGGTTGGTTATTTTGCATAAAACGCGGATTCACATGTGCATAATAATACATGCAGCTAGTGAATGTCATGCTAAGATTAGTACCTCCAAATTCAAATGTTTGAGACTCTCAAGGAGTGTGTACGTAGACAAAACCACGCAGTTGTTTTTCCCTTTCTGGTTTTTGTCAGGGACTGATTCCACCATAATAAAATTTCAGATTTCATTTACACCAATCATTCAATCACCCAGGAAAGTTCTCTAAAAACAGCAGCTTATGTATTATCTCAAAAACGTAACCTTATAGGTCAATATCTATCAAGTCTAGAGCAAAAACTGAGAGAGAGGTTTTATGTTAGATCTCTCTGTACTGAAATTAAAAAGTAAAAATAGTAATTTACTGGGAAAGCTTTACTTTTTGGTGCTTAAACATGCCTCTTTTTTCATTATCTTTTTCCCTGTGTTGGAAATAGCACAATAGAGCTTAGCAGGTCAATTCCAGGTAGTTAGTTGATTAGCTGGGCCTTTACACGTGAACTGATATGAATAGAGATTTAATTTTTGTCAATTCTTATCAAATCCCAATAGCTTGCATGGCCCTGATGTAATAATTACCTCACTAACTTTTACATTATTCAACTCCAATGTAAATTGTGTATTTTTTCAAACTCACTGTATGTGTCTGTGCTTGTTATTGCTAAGAAACAGAAAACACATTTTATGCTGTCGTTGGAACTAGAAAGAAAGTGACTGTTGCAAAGAAATAAGATCTCAAAAGTGCAGTGTGTAGAGCCCCATTTAAGGTACTTGACAAGTGAAGGGAATCTTTATTTTCACTGTTTAGTTGAGAGTCTTAACTAAATGGGATGGAGAAGTAGAGGTTTAATAGAAATAAGAAAAAGAAAGACTTTAAAAAGTAGGTGGAAAGGGGAGGATGGTCTCCAAAGAATGACATCTGCAAAATGTCCTTTTTTCTTCCTTCCATGATCAAGTCACAGTCTTTAAAAGACTTCACCATTCATCAGATCATATCATAACATAACATAACATAACATAACCTTCACTGCACTGCACTGCACTGCTCCTAAGTCCTAGTCCCCATTCTCTTCTGTCCTCTCTTCATTTGGCACACTATTTAACTCCCCCTAGCCCACTCACATTTCCTCACCTCATTTCACCCCAAATTTTCTTTGCCATTTCCCTACCC


Gene Sequence:
>Vu_07647(-)
ATGTCAACCTCTAGAACCTCAGATACACCCTTCAAAGGATATGATCCCAACCAAACTCAAATGTGTCTCTCTCTTCTCCAACGCAACACATCTCCTTCTGGTGAGAGAAGAGGCAGAAGGAAGCAAGCTGAGCCAGGAAGGTTCCTCGGGGTCAGGAGGCGTCCTTGGGGTCGATATGCTGCTGAAATCAGAGACCCCACAACCAAAGAAAGGCATTGGCTTGGCACTTTCGACACTGCTCAGGAAGCAGCTCTTGCTTATGACAGAGCTGCTCTCTCCATGAAAGGAAACCAGGCAAGAACCAACTTTGTTTACTCCGACAACATCAACTTCCACACTATACTTTCTCCTGCCGATGTTCAAGTCCAACTTCAACTTCAACCTCTCCTCCCACCTTCACAGTTCCTCTCTAACACCACTCACACCAAACAGCCAAACAACCAGAATAGCCTCCCCAAGGTTGTCCACACTTCAAACACTGGAAACCCCTCCCCATTGAACAATGACGCCTTTGTTGAAATTGAAACCACGTATGGGTCTGCTGATCAGGATGATAGTTTCTTCTTTTCCAGTGATTCCAACTCAGGCTACCTTGAATGCATAGTTCCTGATAACTGTTTCAGACCTGCTTCCTCCAAAACAAACAGTTCAAACTCCAGAAAGAGCAATGTGAGCGATCAAAAGGCTAACACAAATTCCAGTGAGAGTACTAATCATCATGAACAGTACTACTACTCTCAAGAAATGGCAGGAATGGCCTCTAACTTTTCAGAGTTTTGTTATCCAAGTGAAGTCATGAGTCAAGGATCATGGGATGATCAACAGTCATGGGATTGGAACTGCAGTGAACTTTCAGCCATATTTAAGAACCCATTAAGGGTGGAAAATGGGTGCATGGATGCATTGTACCCGATGAGTGATGATCAGAGTCCAAGTCCAAGCTATGGAGTAATGAATGAGTGTGCTTCTTCTACTACCTGTTCTCCATCACTTCCACCCTTTGGGGACGTAGACTTGGGATACCCACTCTTCTGA