Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_07654 LG1 107822857 107824779 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of innate immune response, positive regulation of defense response to bacterium, regulation of defense response to fungus, cellular response to chitin, positive regulation of defense response to bacterium, positive regulation of defense response to bacterium, protein phosphorylation, innate immune response, protein phosphorylation, innate immune response, protein phosphorylation, protein phosphorylation, innate immune response, regulation of defense response to fungus, cellular response to chitin, cellular response to chitin, protein phosphorylation, regulation of innate immune response, regulation of defense response to fungus, protein phosphorylation, regulation of innate immune response
Cellular Component   located in   plasma membrane, plasma membrane, anchored component of plasma membrane, anchored component of plasma membrane, plasma membrane
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/A 107823046 downstream_gene_variant
A/G 107823129 downstream_gene_variant
A/T 107823136 downstream_gene_variant
C/G 107823140 downstream_gene_variant
G/A 107823192 downstream_gene_variant
G/A 107823197 downstream_gene_variant
T/A 107823491 missense_variant p.Phe47Tyr
A/C 107823580 missense_variant p.Thr77Pro
T/A 107824130 missense_variant p.Trp208Arg
T/A 107824365 downstream_gene_variant
G/T 107824739 missense_variant p.Gly383Val
A/T 107824740 synonymous_variant p.Gly383Gly
T/A 107824769 missense_variant p.Leu393Gln
G/A 107824778 splice_region_variant&stop_retained_variant p.Ter396Ter

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_07654.1
MGCVLSCLNGSTTMEESEERTLIALASTTDRRARSESPITIKRAKVFSFRELAEATKNFRSRLLLGRGGFGSVYKGQLKNGQDVAVKVLEKISQQEDREFVTGVEMLSLLYHPNLVTLIGYCCERDQRLLVYEYMPLGSLENHLFDRRLGREPLDWNTRMKIASGVAKGLEYLEIWRDLPVMFGELRSSNILLDEGYHPKLSYFGIPKFGPLGNSSHVSTGSVGKYGYCAPEYAVTGNLTPECKVYGLGVVLLELISGRKAIDKSRSPETCHLVKWAQPILKDISEYHRLVDPLLHGSYQVEWLNQAIVIAAMCLHEKADRRPTIREVVSALTYIESQQKQCNRRGRHLCSFFYPSLVRKESGLEKERKKGEFERGSTGYGADSGKQVVGYIDMLEI*


CDS Sequence:
>Vu_07654.1
ATGGGTTGTGTTCTCTCTTGCCTTAATGGATCAACAACCATGGAGGAATCTGAGGAAAGAACACTTATTGCTCTTGCCTCTACCACAGATAGAAGAGCAAGATCAGAGAGTCCAATTACCATTAAACGTGCGAAAGTATTTTCATTCAGAGAGCTTGCAGAAGCTACAAAGAATTTCAGGTCAAGACTTCTGTTAGGTAGAGGAGGCTTTGGGAGTGTGTACAAAGGTCAACTCAAAAACGGCCAAGATGTTGCTGTGAAAGTGCTTGAAAAAATTTCCCAACAAGAAGACCGAGAGTTTGTCACCGGGGTTGAGATGCTGTCTCTCTTGTATCACCCAAATCTTGTGACACTGATTGGTTACTGTTGCGAACGTGACCAGCGGCTACTTGTTTACGAGTATATGCCGTTGGGGTCCTTGGAGAATCATTTATTCGATCGTCGTCTTGGCAGGGAACCACTTGACTGGAATACAAGGATGAAGATAGCAAGCGGTGTGGCAAAGGGATTGGAGTATTTGGAGATTTGGAGAGACCTTCCTGTGATGTTTGGAGAGCTCAGATCATCGAACATCCTCCTGGACGAGGGTTATCATCCCAAGTTGTCTTATTTTGGGATACCGAAATTTGGTCCCCTTGGTAATAGCAGTCATGTTTCAACAGGATCAGTGGGAAAATATGGTTACTGTGCCCCAGAATATGCAGTCACCGGCAACCTAACTCCGGAATGTAAGGTCTACGGTTTGGGAGTGGTCCTTCTGGAACTCATTTCGGGGCGTAAGGCCATTGATAAGAGTCGTTCCCCTGAAACGTGCCATCTTGTTAAGTGGGCACAACCTATTTTGAAGGACATTAGCGAGTATCATAGATTGGTGGATCCTCTACTTCACGGGTCTTATCAAGTGGAATGGCTTAATCAGGCGATTGTTATTGCAGCTATGTGTTTGCATGAAAAAGCTGATAGAAGGCCTACGATACGGGAAGTGGTGTCTGCTCTAACGTACATTGAATCACAGCAAAAACAGTGTAACAGAAGGGGTCGACATCTATGCTCTTTCTTCTACCCATCTCTTGTCAGAAAAGAAAGTGGATTGGAAAAAGAACGGAAGAAAGGGGAATTTGAGAGAGGCAGTACCGGTTATGGTGCAGATAGTGGAAAGCAAGTAGTTGGGTACATAGATATGCTAGAGATATGA


Promoter Sequence:
>Vu_07654::LG1:107820857-107822857(+)
TTTTTAAAAATGAAATCATAACAAGTTTACACAATTTCAAAATTACACAATTTTAGTAATTTAGCCGACAAAACATACTAGACTACGATAAAACAAAAGAGAAAGAAATGTACTTATATTTATACTAAAATAACTTTTCAAAGGTAAAGAACAATTGAAGTTGAACAATTGTTCACTATGTATGATGAGAAATGACCTTGTATTTACACGGCTACTTAACAATTATAAGGTAATAAATAATAAAGAGTAAACAAAAATATTTATATTACATATATAAATACTCACATGTAAAATATAAAAAAGTATATAATAAAATTATTAAAATAGTTTTTTATTCTAAAATATTGAATCGCGTTTTTAATTCATGAATATGTTACCCACCCAATTTTAATTGGGCCAAATAATAAAATTCAAACCAGCTTAATAGTTTACCCCAACTCCATATAGTGCAATTTGGTTTTGTTAAGTTGACCCATTTACGTTCCTGTATTAAATTTATTTTTAAAAACGAAAATGATTTTTTAAAATATTTCTGTTGAAATAAATTTTCAACTAAATAAATAAACTGGAAAGAACACCCAATTAATTTTTTTTTTGTAACGTATAGTGAAAGTACTGTGAGTTAAAATTTAGAGGCAAATAAAAGTACTATAATTTGAAAAAATTAAGCCTTGAAAATAATAAAATATAAGTAATTTAAAAAAAAAATCTTCAAAGTAAACATTGGTAATTTACATATGTATATACATTAAGTATATTGGACGTAATTTTTTGATATTTTTTATGTCTTTAATTTTAATAATGTTAATTTTAGTTACATTTTGTATAAGTTCTTTGAATTTAAATCTAATCTTTAGTATCTTACATATTTTATTATTTATATAAGTTTATTACTAGCAAGAAATACAAATTTTGAGACATTATTAAAAATCCATTTTTTTCCGATTCCCCATTGATTCTCTAGAGTCATGCTTGTAGATTCTTTTATTGGTTATGGATTTTGATCATGTTTCGAGAAGAACTTAAATTAGAGGTGATAATGCTTATTAATTCATCTCGTTTTGATTTATTTTGTATTTGATCCACAAAAAATGTATTGTATTGACTCATTCTGCATAAGAAATATAAACTAATTTCTAATTTTATTATTTTGAATTAACAAGTATAATACATTATGTTCAAAGAATAACAAAACCGTAGTTTAAATGTAACTAATAAAATATTAATTTAAAATAAAATAACAATTATACTTTTTAAATGAATCTTAAATTTTTCTCCTTGTAACTATTAATTTTTTTTAATAAAATTAAGAGTACTATTAATTATAAAGGTTAAGTTCAAAAATTTACCTAAATACTTAATAAATAACCTTTCTTGCAAATCACCGTGTTGTATCATGGAATATTTGTCTTTTCAATAATATTAAAATATATAATTCCTTTACAGATTAAATTTATATAAACAAGGTGCAAGTTATACAAAGTACACTTCTCACGTCATCATATCTAACTTTGTAATTAGTTATGGATGCATAGCTAACTTCTTGAATTAGTAAGATTTAATATCATGTAATGATTAAATATATTATTTTTTCTTTATAATTATGCAAATGTGTAATTTGAGTTTTATAAAGAAATCAATTATATATGACATTTCTACTTCATTGATATTAATATTACAAATCAATAATGAAAATTTATTAATAAACATATTTTAATAATTTTGAAACTAATATCAATAAATTAACAATATATACTAATGAATTAATAAATATAAATATATTTAAATTAAAATCCTGAGACTGAAATTATACAATTTTAAATGTCTAAGAAAAAAAAAATACTAATAGTATTAACTCACGTATATATACTGTCATTACATTGTATTTTATACTTCGTTTTCAGTTTCTTAGTCTCTTGAAAGAGCGTTAAAGATCTTCTTCAGAGAGTGAAAGGAAGAAGGTGAAGACAGAGTGTGATTGGTTTTCTTCCATTTGGATA


Gene Sequence:
>Vu_07654(+)
ATGGGTTGTGTTCTCTCTTGCCTTAATGGATCAACAACCATGGAGGAATCTGAGGAAAGAACACTTATTGCTCTTGCCTCTACCACAGGTCACAACAAATTTTCTATCTTTCTTCCATAAACTGCTTCTTCCTTCTATTTCCTGCACACTTTGCTTTCAGGGTTGCATTAAATTTTCCTCTTTTTTGCGTTTTCTTTCTTTTTTCTTGAATCTTGACCATGCTTTTCTTGGAAACTATTGGTTTCTTTCATCTTATATATTAGTCATCAGTTAGATGAAATTCCATCTTGAGGCACAAGAAATAAGAATGACACAAGTTAAATGTTAAGTTTGCTGAGATGAAACTAAATAATTTACAATCCAAGCAAGATAATCAAACTGCTGAAATCGCACTTTAACTGATTGTGGTGCAATATGCACACCCTTGTCTTGGTTTTCCTTATAAAAGATGATTGTCAATGCATTTTACACCTTCTGGCTGCATAATCTTTTGCAGTATCAACATAATGGCACAGCCTGTCTACAAGCTTTGAATTCAATACTTTCTATTGGCGCCTACTTATACCGTATTATTTAATCAGATAGAAGAGCAAGATCAGAGAGTCCAATTACCATTAAACGTGCGAAAGTATTTTCATTCAGAGAGCTTGCAGAAGCTACAAAGAATTTCAGGTCAAGACTTCTGTTAGGTAGAGGAGGCTTTGGGAGTGTGTACAAAGGTCAACTCAAAAACGGCCAAGTAATAATTAAGATCTTCGAAGACTAATTATCAATGTATATGCTGTGAGTTCCCATTTATCCATGCATTGCATTGCAGGATGTTGCTGTGAAAGTGCTTGAAAAAATTTCCCAACAAGAAGACCGAGAGTTTGTCACCGGGGTTGAGATGCTGTCTCTCTTGTATCACCCAAATCTTGTGACACTGATTGGTTACTGTTGCGAACGTGACCAGCGGCTACTTGTTTACGAGTATATGCCGTTGGGGTCCTTGGAGAATCATTTATTCGGTAAGAGATATATATTCTATGCATATTCATTTTACTTTTCCGTAAGGTTTGATTAGTGATGATTGTGTTCGTGCAGATCGTCGTCTTGGCAGGGAACCACTTGACTGGAATACAAGGATGAAGATAGCAAGCGGTGTGGCAAAGGGATTGGAGTATTTGGAGATTTGGAGAGACCTTCCTGTGATGTTTGGAGAGCTCAGATCATCGAACATCCTCCTGGACGAGGGTTATCATCCCAAGTTGTCTTATTTTGGGATACCGAAATTTGGTCCCCTTGGTAATAGCAGTCATGTTTCAACAGGATCAGTGGGAAAATATGGTTACTGTGCCCCAGAATATGCAGTCACCGGCAACCTAACTCCGGAATGTAAGGTCTACGGTTTGGGAGTGGTCCTTCTGGAACTCATTTCGGGGCGTAAGGCCATTGATAAGAGTCGTTCCCCTGAAACGTGCCATCTTGTTAAGTGGGTGAGTTATTCACCTTGTCAAAACTTGATTTTTTTTTTTTTTTGAGATGTTTGATCTAACTCTGCTGGTGGTGTTTTGGAAGGCACAACCTATTTTGAAGGACATTAGCGAGTATCATAGATTGGTGGATCCTCTACTTCACGGGTCTTATCAAGTGGAATGGCTTAATCAGGCGATTGTTATTGCAGCTATGTGTTTGCATGAAAAAGCTGATAGAAGGCCTACGATACGGGAAGTGGTGTCTGCTCTAACGTACATTGAATCACAGCAAAAACAGTGTAACAGAAGGGGTCGACATCTATGCTCTTTCTTCTACCCATCTCTTGTCAGAAAAGAAAGTGGATTGGAAAAAGAACGGAAGAAAGGGGAATTTGAGAGAGGCAGTACCGGTTATGGTGCAGATAGTGGAAAGCAAGTAGTTGGGTACATAGATATGCTAGAGATATGA