Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09025 LG2 13941270 13943428 PREDICTED: transcription factor MYB98-like
Map

Annotations  
category   relationship type   keyword
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
G/A 13941317 synonymous_variant p.Leu16Leu
T/A 13941395 synonymous_variant p.Ile42Ile
T/C 13941415 missense_variant p.Val49Ala
A/T 13941868 intron_variant
T/G 13941902 intron_variant
A/T 13941979 intron_variant
A/G 13942015 intron_variant
T/A 13942245 intron_variant
T/C 13942252 intron_variant
C/T 13942253 intron_variant
T/A 13942255 intron_variant
G/A 13942256 intron_variant
A/T 13942334 intron_variant
A/G,* 13942381 intron_variant
T/C 13942466 intron_variant
T/G 13942488 intron_variant
A/T 13942496 intron_variant
T/G 13942552 intron_variant
G/T 13942573 intron_variant
A/G 13942596 intron_variant
A/G 13942701 intron_variant
C/G 13942703 intron_variant
A/G 13942771 synonymous_variant p.Glu237Glu
C/A 13942982 missense_variant p.Pro308Thr
A/G 13943280 missense_variant p.Glu407Gly
G/A 13943346 missense_variant p.Gly429Glu
T/C 13943385 missense_variant p.Val442Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09025.1
MDIETLFKETFVPQPLQESCLKDMIPLGNPLSQECLQDFHHIDQFHFNVPSSNNSIIQNPTFDAFENFTFTGSSPALDVYESKPFVENRHTHVMDNFLYGNHNLILPQRNVELDLMVADQSFLPFSPQEIKPSNFSLPDEVSCISPMNYYKRIGLNKNNKSYPTTRRTSKVRKKSNTVKGHWTIEEDGLLIQLVEQYGLRKWSHIAKILPGRIGKQCRERWHNHLRPDIKKDTWNCEEDKILIEAHAEVGNKWAEIAKRLPGRTENSIKNHWNATKRRQYSKRKCRSKYPRGTLLQEYIKSLNLDKNPPIDYRRKSSANHAIKTSTSKSTAPALPQTASQFSAIELPPDSDFNVVPDFLFGENLLEEDCSIHSLLDGVPCVPFMDNKNCEGTLQCDPMMEGMQHFEYEGIECFAAINGDENHVETDMQPGMLEVEVKKELDLVEMISQINSETFHV*


CDS Sequence:
>Vu_09025.1
ATGGATATTGAGACACTGTTCAAAGAAACCTTTGTCCCACAGCCCTTGCAAGAAAGCTGTCTGAAAGATATGATTCCTTTGGGAAATCCTTTATCGCAAGAATGCTTGCAAGATTTTCACCATATTGATCAGTTTCACTTCAATGTGCCCTCATCCAATAATTCAATAATCCAGAACCCAACTTTTGATGCTTTTGAAAATTTCACCTTTACAGGTTCATCACCTGCTTTAGATGTATACGAGAGCAAGCCTTTTGTGGAGAATAGGCATACTCATGTCATGGACAATTTCCTTTATGGAAATCATAACTTGATTCTCCCTCAAAGGAATGTTGAACTAGATCTGATGGTTGCAGATCAAAGCTTTTTGCCTTTTAGTCCTCAAGAAATCAAACCCTCCAATTTTTCTTTGCCAGATGAAGTTTCATGCATATCCCCCATGAATTATTACAAAAGAATTGGCCTTAACAAAAATAATAAATCCTATCCAACCACTCGAAGAACGTCCAAAGTTCGCAAGAAGTCCAACACAGTAAAGGGGCATTGGACAATAGAAGAAGATGGATTATTGATTCAACTGGTGGAACAATACGGTTTGAGGAAGTGGTCTCATATAGCTAAGATACTGCCTGGAAGAATTGGCAAACAGTGCAGAGAGAGATGGCATAACCATCTAAGGCCTGATATTAAGAAGGACACATGGAACTGTGAAGAAGATAAAATACTAATAGAAGCTCATGCTGAGGTAGGAAACAAATGGGCAGAGATTGCTAAAAGGTTGCCTGGAAGAACTGAGAACTCGATCAAAAACCACTGGAATGCAACCAAGAGAAGGCAATATTCCAAAAGAAAGTGCAGATCCAAGTACCCCAGAGGCACTCTTCTACAAGAGTATATCAAGAGCTTGAACTTAGACAAGAATCCCCCAATAGATTATAGGAGAAAATCTTCTGCTAACCATGCTATCAAAACCAGCACAAGCAAATCCACTGCACCAGCTTTGCCCCAGACAGCTTCTCAATTTTCTGCCATTGAATTGCCACCAGATTCTGATTTCAATGTGGTCCCAGATTTTCTCTTTGGTGAGAATCTCTTGGAAGAAGATTGCAGTATTCATTCCCTTCTAGATGGTGTGCCTTGTGTTCCTTTCATGGATAACAAAAATTGTGAAGGAACATTGCAATGTGATCCTATGATGGAGGGAATGCAGCATTTCGAATATGAAGGAATAGAGTGTTTTGCAGCTATTAATGGAGATGAGAATCATGTTGAGACAGATATGCAACCAGGGATGTTGGAAGTTGAAGTTAAGAAGGAGCTGGATTTGGTTGAGATGATCTCTCAGATTAATAGTGAAACTTTTCATGTTTAA


Promoter Sequence:
>Vu_09025::LG2:13939270-13941270(+)
AGGAGTCGGGCTAAGGGCTAAGCCGATACAGATGGCGGAGAACGCTTGCATAAATGTCCAACCGTTCGGATGCAGCTGAGTGGGAGCCACGTTAAGCTCCCTCAGAACGCCCATTTGGAAGTCCGAAAAAGGGAGGAGAACCTTTAAATCTTTAAACATAGTAGCATAAGCATAAAAGAAGTCGGTGAGGTAATTCCCCCGATCGTGGCATACGCGCTCGGTCATTTGGCAAACGGGTAGTTTAAAATGTCTAGCGTCTTCAGCAGCCTTTACCAGACAAATATTACTGATCAACTCCCTAAATGGGCGGCGATGGTGGAAGGAAGAAAGAAATTTGCCTAACCTCATGGGGAACCCATTCTTAGCCAGGGACAACAGGCCAAACTCTAGGTTTACCATCCCAAGCGCCGGAGGAGTCCACGTAGATGGCGACTTCCTCAGGAGCATTGCTATCCGCTAGGAGATCGGAGGAGTTCCCTGAAGGGGAAGCCACAGCACCCTGACAAGCAATGGCACCCGAGGAGGAAGATGGAGTACTAACATCATCGTCGGCGTACCCCCTACCCTCTTCGCCGGAGAAATTAGAAGACATGATTACTTGAGAGGATGAAGATGAGGAGGATAGGTACGAGAAAGTAAAGCACGAGATAGTAACGACGGCGAAAAGAAAGGAGTAAAAAATTAGGGCAAAGGCGGGGCTATTTATACAGGGTAAAAAGCGATTCACCAAGCAAATCTGGAGCGTCAAACACAAAATGATCTGACGGTCTGGGCGATCTGACAGTTCATTTTCGCCTTTCCCGCCTAAATTTTACAATCGTGACTCTACGACTTCCCGCCCTTGCAAATATCGACAACACAGTTGAAGGCCTTAATAAGAGAAGATGCGAACCGATCGGAGACCACTTCAAAACCCTACGCAAAAATATTTTGCTAGGGCTTGGGGGACTTGTGTTACTACCGAGTAGGATGGACCAACCGGATATGCTTAGTCGCTACTGAGTAGTTTGGACCGATCGTCTAGGGACGATGGAAGTATGAATCAGACCGACCAGGTATGTAAGGGTGATGGAAGTCGATCATTCCCGGTCGGACGCCAAGGTGATACTCGCGAACTCTCCAGCCGTTGGCTGGAGACAACCTTTTGAATGTCAATGAATGCATAATTAATGAGATAACGGTCATTGTCGAGCAGTTAAGGTGAGCATTGATCGTCATTAAGAGGTAAATTAATAGATAATATTCCTTGAAACCCTATAAATAACAGGGGATTAAGGAGTTAAGTCTGATTTTGCTAAATTTTACTAGACTTGTGGAGATAAATTCTAACTTGAGCGTCGGAGTGTTCCCGAGCGGTAGCCGCAAGAGTTTCCTTCGGTCCCTTTCAGCATAAACAAATATAAAAAATAATTTAGACATTAATTTATCGGTAGTTAAATTAGACATTAATTTACACTCTCATGTAGCATAAGTATGCATGTAAAAAATGGTTGGATATTAAAACATCATAATCCTAAATATTTAGATCATCTGCTTAAGTACAAGTGAACTCTATTTTCGAATGTACAATAGAGTAACTAGTTTATTTACTGGCTATATACCGACTAGAGTAACTCTTAAGAGTACAATAGAGTAACTCTTAAAGTGAGAGTTACATTTTGAACAATATAAATGAGATATTAACGTTTGCGGTTAGTTCATAATGTACAAAACATATTTTGTAACCATAGCACGTGATATTATATATGTAAATATAATAAATATAATAAAAAAAAAGTAATGAAATAAAAGTTATATTAATGGTTTTTCCCACCTCATTTGTGTTGACTTGTGGTTAAGTAACGGACAGAAAACATAAATGTTTTTATTAATGAAGTGCCGGTTACCAACGTAGTTTACGGAATGAAATGTTGATCGAAAATATAAAGTTAGATCAGTAGGGTTAAACTTTTGTTCAAGGTGTGAATCAACCCTTGAATCCATTCTAGCTCTCATATCCA


Gene Sequence:
>Vu_09025(+)
ATGGATATTGAGACACTGTTCAAAGAAACCTTTGTCCCACAGCCCTTGCAAGAAAGCTGTCTGAAAGATATGATTCCTTTGGGAAATCCTTTATCGCAAGAATGCTTGCAAGATTTTCACCATATTGATCAGTTTCACTTCAATGTGCCCTCATCCAATAATTCAATAATCCAGAACCCAACTTTTGATGCTTTTGAAAATTTCACCTTTACAGGTTCATCACCTGCTTTAGATGTATACGAGAGCAAGCCTTTTGTGGAGAATAGGCATACTCATGTCATGGACAATTTCCTTTATGGAAATCATAACTTGATTCTCCCTCAAAGGAATGTTGAACTAGATCTGATGGTTGCAGATCAAAGCTTTTTGCCTTTTAGTCCTCAAGAAATCAAACCCTCCAATTTTTCTTTGCCAGATGAAGTTTCATGCATATCCCCCATGAATTATTACAAAAGAATTGGCCTTAACAAAAATAATAAATCCTATCCAACCACTCGAAGAACGTCCAAAGTTCGCAAGAAGTCCAACACAGTAAAGGGGCATTGGACAATAGAAGAAGATGGGTAAAAAATCTGAAAAATAAAACATAATTTCATGAAATCTATCATTTTGGTCATTTACATCATGGTTTTTAATTATTTGTTGGTCGCAGTTTCGTTGTACTAGTTTTGGCTGATATATATGACTATAATTCAGGTTGCAAAAATCAACACTACAGTCGAAATAGTGGTCACAAATCTTTTTTAAAACATTTACACTATATTCTTTGTTTACAAAATGGAATTTTATGTGTTTCAATTTCTTTTAAAAATATGGATCTGTGTTTGCACGAACAGATTATTGATTCAACTGGTGGAACAATACGGTTTGAGGAAGTGGTCTCATATAGCTAAGATACTGCCTGGAAGAATTGGCAAACAGTGCAGAGAGAGATGGCATAACCATCTAAGGCCTGATATTAAGGTAAAATTATTTTTTTTTATCATGATTTACGTACACAATTTATCTTGTTACAAGTTTTCTTTAGTCTATCATAATATTTTTAATGGTTTTTTAGAGTCTCTAAAAATGACATGGGTATTTACATTTTTTATATATATTACATTTTTGTATATATATATATATATATATATATATATATATATATATATATATATATAGTTCAAATTTTTTATGTTTTTGGTTAATAAAATTATTGTATTAATAAATTAATTAATTTAATTTTCATTTATAAAGAATAATATAAATGATTTAATATTTTACATAAATATATTTATTTAGATTTTTTTCATAATAGTTTATCGACTTTATTGAAGTATAAGTTTTATAATAGATTTGATGGTTCAATGTTCTGTATTCTTTTACTTTAATTTTTTCTTTTTGTGATGCAATTGATGAATTCTGGGATTTTAACGTTAAGATGTCAAAATGAACTTTTGGACATTTATGTTTTGAATTTTTATTGTGGCATTATGCAGAAGGACACATGGAACTGTGAAGAAGATAAAATACTAATAGAAGCTCATGCTGAGGTAGGAAACAAATGGGCAGAGATTGCTAAAAGGTTGCCTGGAAGAACTGAGAACTCGATCAAAAACCACTGGAATGCAACCAAGAGAAGGCAATATTCCAAAAGAAAGTGCAGATCCAAGTACCCCAGAGGCACTCTTCTACAAGAGTATATCAAGAGCTTGAACTTAGACAAGAATCCCCCAATAGATTATAGGAGAAAATCTTCTGCTAACCATGCTATCAAAACCAGCACAAGCAAATCCACTGCACCAGCTTTGCCCCAGACAGCTTCTCAATTTTCTGCCATTGAATTGCCACCAGATTCTGATTTCAATGTGGTCCCAGATTTTCTCTTTGGTGAGAATCTCTTGGAAGAAGATTGCAGTATTCATTCCCTTCTAGATGGTGTGCCTTGTGTTCCTTTCATGGATAACAAAAATTGTGAAGGAACATTGCAATGTGATCCTATGATGGAGGGAATGCAGCATTTCGAATATGAAGGAATAGAGTGTTTTGCAGCTATTAATGGAGATGAGAATCATGTTGAGACAGATATGCAACCAGGGATGTTGGAAGTTGAAGTTAAGAAGGAGCTGGATTTGGTTGAGATGATCTCTCAGATTAATAGTGAAACTTTTCATGTTTAA