Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09545 LG2 26365993 26368142 PREDICTED: protein UNIFOLIATA
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   maintenance of inflorescence meristem identity, gibberellic acid mediated signaling pathway, flower development, regulation of transcription, DNA-templated, gibberellic acid mediated signaling pathway, floral meristem determinacy, floral meristem determinacy, regulation of transcription, DNA-templated, floral meristem determinacy, regulation of transcription, DNA-templated, gibberellic acid mediated signaling pathway, flower development, regulation of transcription, DNA-templated, gibberellic acid mediated signaling pathway
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, DNA-binding transcription factor activity, sequence-specific DNA binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein self-association, protein binding, chromatin DNA binding, protein binding, protein binding, protein homodimerization activity, chromatin DNA binding
SNP Position Effect Amino acid change
C/A 26366155 missense_variant p.Leu55Ile
C/A,* 26366157 synonymous_variant p.Leu55Leu
C/T 26366424 synonymous_variant p.Thr144Thr
T/A 26366508 downstream_gene_variant
T/G 26366618 downstream_gene_variant
G/T 26367019 stop_gained p.Glu218*
G/A 26367127 missense_variant p.Gly254Arg
C/T 26367420 downstream_gene_variant
C/T 26367421 downstream_gene_variant
C/G 26367473 downstream_gene_variant
T/A 26367496 downstream_gene_variant
C/G 26367497 downstream_gene_variant
C/A 26367545 downstream_gene_variant
A/C 26367546 downstream_gene_variant
T/A 26367582 downstream_gene_variant
C/A 26368135 missense_variant p.Pro386Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09545.1
MDPDAFTASLFKWDPRTVLPAAPPSRPPPPLLDYAVAPPSVAPSYHPARAVPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDEELDDMMNSLSQIFRWDLLVGERYGIKAAVRAERRRIDDEDIKRRTGNLLSTDTTTTTTNALDALSQEGMMKKGIEIDIIVGLSEEPVVQREKEAVGSGGGSTWEVVALEERRKQQRRRRTKMKEQEEKEEVEDEEGEENEEGNNNGGGCERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLMQVQAIAKDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSICAHLPF*


CDS Sequence:
>Vu_09545.1
ATGGATCCGGACGCATTCACAGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTCCCCGCCGCACCGCCCTCCCGGCCCCCGCCGCCGCTCCTAGACTATGCTGTCGCCCCTCCCTCAGTCGCCCCGTCTTACCACCCCGCGAGGGCGGTGCCCCGCGAGCTCGGCGGCCTCGAGGAGCTTTTCCAGGCCTACGGCATCCGCTACTACACGGCTGCCAAGATCGCCGAGCTCGGGTTCACGGTGAGCACGCTGGTGGACATGAAAGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGATCTCCTCGTCGGTGAACGCTACGGCATCAAAGCCGCCGTCAGAGCCGAACGACGTCGCATCGACGACGAGGACATCAAACGCCGCACTGGCAACCTCCTCTCCACCGACACCACCACCACCACCACCAACGCCCTCGATGCCCTCTCTCAAGAAGGAATGATGAAGAAGGGCATTGAGATTGATATTATTGTAGGTTTGTCGGAGGAGCCAGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAGCACGTGGGAGGTGGTTGCGTTGGAGGAGAGGAGGAAGCAGCAGAGGAGGCGGAGAACGAAGATGAAGGAGCAGGAGGAGAAGGAGGAGGTAGAAGATGAGGAGGGAGAAGAGAACGAGGAGGGTAACAACAATGGTGGAGGTTGTGAGAGGCAGAGGGAGCACCCGTTCATCGTGACGGAGCCTGGGGAGGTTGCACGTGGGAAGAAGAATGGGTTGGACTATCTGTTTCACCTCTACGAGCAGTGCCGCGAGTTCTTGATGCAGGTCCAGGCCATCGCGAAGGACCGCGGTGAAAAATGCCCCACCAAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAAGCTGGAGCGAGCTACATCAACAAGCCAAAGATGCGACACTACGTCCACTGCTATGCCTTGCACTGTCTGGACGAGGAGGTGTCGAACGAGCTTCGTAGGGCGTTCAAGGAGAGAGGAGAGAACGTTGGAGCGTGGAGACAAGCATGTTACAAGCCCCTTGTGGCCATCGCAGCGCGTCAAGGTTGGGATATTGATGCCATATTCAACGCCCACCCTCGTCTTTCCATTTGTGCTCACCTTCCCTTCTAG


Promoter Sequence:
>Vu_09545::LG2:26363993-26365993(+)
AATAAATCAATATTTCATGTTCATGTTCAATATAGTTGTTTCCACTTTTCATATTGTATCTTGTATCCCGTATTGTGCTTATATGAGTATTTTTCTCAGTTGATCCAATGACAGATAAAAACTACCAAGAAACTTCATTCCTCATGGTGTTTCACTCAAGTATTATAGATTTTGGCCAATGGCGACAAACTCTCATAGGATGACTCAATAAATAGAGGATATTGGCGGCGAGAGAGTGGTAGATGGAGAGAAGGTCCTTTGCTTGTTTGAGCGATGAGGTTTTAGGATTTTGAAATAGCAAGGAATGGATGAAGAAGGTTTATGTAATGTTGGGAACAACGAGGAAGAAGAAGAAGAAAGGATTGATATTCGAATTGGGCAAAAACTTGGTGGACTGAATCTAAATCACAATCACTCATTGATTGCAACAATGAGGAATAACATTGCGATCACCATCGTGGCTCCACCACCTGTAACCACCGTCGTGGAGGTTCAAGACCAAAGGGGTCACACTCATACCATTGATTCCTCTACCATCAAGACCTTCCCTGTTTCCAACGGGAAGAATAGAAACATGACACACAACTAAAATAAAACCTGACATCAAATGTGGCCAGACGTTAACGAAAATTTATAGTTTCCTTAAGGATAAGGATCAAAGAGTATCAAAGTTTGAAAGAGACTAAAATCACTTGATAATTGAGGGACTAAAAACATATTTAACCTTTTAAGAACTTTTGTAATTTGTTTTTAATTTTAATCTATCAATCTCACTTCAATGAGAAAGTTCACAGATGAAATTTGTAAGCTAGATATTGATGTTGAAATGAAATTTGAAGTTTTAAATTTGAAGTCATTGATATTTCTATAAATATATTATAGTAAAATTATCTTTTAAGGATTATCAGTATTAAAAAGTTGTATATATATCGTAGTAACATTTGCATAAATTCAATAAAACAAAGTTCTTGAGAACCATCTTATATTTATCCAGAATTAACATTTTATTTAATTTTTTTCTAAATTTAACTCACTATTATGAAATGATTATACGAGTATAAGAAAGTAAAAGTGGTTGTGATGGATTACTAGCAGTAGATGAGTTAAAAGTTATCTTTTGCGATGAGAATGACATTAAAAGAAGATATATTTGAGTTGGAAAGTGTTGGAGAAGTATTTCACGGGAATGTATAGCAGATAAATTTGATTACAGACGAGACAACGCGAGAGAATAAGAGTCGCTAGGATCAATAAATTCCTGTGGGATTGAGACATGGACAAAGTAAACGCCTTCCCAAGACAAACAAACAACATTATTTGACGTACTAAATTGACTTCATAATCCTAACACCAGCCTTCTCCAAAAACAACCACAATTAGGTACAAACTTAACCTACGCAATTTTCATGCATGTCTTTGCCTTTCCGAACATTCAATTCACAGCTAACCCGAAATGGCCACTCTAACTCTTGCTTAAGCAAAACTGTACCACTGTGAGGACCACCCTGATTAAGTACACACCAACACATATATGAGCAAACAGAATTGACAAACCCAAAAAAATCAGTCAAATCACAAGTCAAACCTCATCTCCTGAATGAACGAGAAATTACTACGACACCAAACCATGGATGATGAGAGATTAATTTTATCACGTAAAGGTTGACAAGAGAGTGTGAAATTTTTTGTTGAACGAAGCTTTGGAGAGTTCAGTTTGAGAGTAACTAAAAGGGAACCAAGGGTCAAGAGTTTCAAGAAAGATCTCACTGAGACGCAAAAAGGGGGTGAGAGCAAGAAACCACAACCAGGAACCAGTCTCGGGAAAAACACCCCAGAATCAAATCAGAATCATGGAAAAGGGTAGTTTGGAGAATTAACCCCTCTCTTTCTCTCTGCACAGGAAATTAACCCCTCTCTCTTTCGCCACCTTTATGCTTTCGCCTTTATCTCCACCCAAACAGTACCACACACGCACCTTCCACTCCTCACTTTCCAAACCA


Gene Sequence:
>Vu_09545(+)
ATGGATCCGGACGCATTCACAGCCAGCCTATTCAAGTGGGACCCACGCACCGTCCTCCCCGCCGCACCGCCCTCCCGGCCCCCGCCGCCGCTCCTAGACTATGCTGTCGCCCCTCCCTCAGTCGCCCCGTCTTACCACCCCGCGAGGGCGGTGCCCCGCGAGCTCGGCGGCCTCGAGGAGCTTTTCCAGGCCTACGGCATCCGCTACTACACGGCTGCCAAGATCGCCGAGCTCGGGTTCACGGTGAGCACGCTGGTGGACATGAAAGACGAGGAGCTCGACGACATGATGAACAGCCTCTCCCAGATTTTCCGCTGGGATCTCCTCGTCGGTGAACGCTACGGCATCAAAGCCGCCGTCAGAGCCGAACGACGTCGCATCGACGACGAGGACATCAAACGCCGCACTGGCAACCTCCTCTCCACCGACACCACCACCACCACCACCAACGCCCTCGATGCCCTCTCTCAAGAAGGTACACCATACCGAATGCTCGTTCTATACCTAATTAGCCCTTGTTGTATGTGAAGTAACTGTGTCATCGTTTATAGTTAGTAGTATTATGACAGTGATAATTATTACGCGGTACTACGTTGGGCAGCTCTATCGTTTGGCTAGTTAAATTTGAAACAAAAGTCTCACTAGCTAATTTATTCTACTGTTATATTAAACTACTGTTCTATGTTACAACATAAAAGTCAGCAGGTACTAGCAGTGCTACAGCTAAAAGGCTGAATAATTTGCCATTCCATGAGCGTACATGGTGGAGTAGAAAAACATGCGTTAAGAATGAATCTAAATAGAGAAGAAACATGTGTACATGTGTGTGGGTGTGTGTGTGATATAAGGAATGATGAAGAAGGGCATTGAGATTGATATTATTGTAGGTTTGTCGGAGGAGCCAGTGGTGCAACGAGAGAAGGAGGCGGTGGGGAGCGGGGGAGGGAGCACGTGGGAGGTGGTTGCGTTGGAGGAGAGGAGGAAGCAGCAGAGGAGGCGGAGAACGAAGATGAAGGAGCAGGAGGAGAAGGAGGAGGTAGAAGATGAGGAGGGAGAAGAGAACGAGGAGGGTAACAACAATGGTGGAGGTTGTGAGAGGCAGAGGGAGCACCCGTTCATCGTGACGGAGCCTGGGGAGGTTGCACGTGGGAAGAAGAATGGGTTGGACTATCTGTTTCACCTCTACGAGCAGTGCCGCGAGTTCTTGATGCAGGTCCAGGCCATCGCGAAGGACCGCGGTGAAAAATGCCCCACCAAGGTATTCTTGTCATGAGTCCTGCATCACTCACTCACTCAGCCGTGCCTTTGTTCTGATCACTCTGACTCTGCCACTCACTTGCGTTGTTGTGTAGTTCCGTTTGAATAATGTTGTGTTGCCGTGACGTTGGCGCGGAACACGTGACAAGTCAGGGAGTCTCGTGAGGGGTCCATCTTCCTTTAAAACTGGAATTTTGTCTCCGTACAAGCCAAGTGAATTATCCAGTTACAACTCCTATACTTGCTTCCCTACCACACCACAAGCACCCGCAAGTCAAAGTCTTGCATGTGCCCCCAATTTCCCCTTTCACCCACTGGATCCTCGCACGCCCTCATAACAATCCCTATCCCCCCGTATCTATCATTTCTCATTCTGTTCATTAATTTCATTCATCTCCTCGCCCACCCCAATCATTATTATATTAATATCATTACACCTTCAACCCTACTTTTCTACTTACACTAATTTTCATTACACAACATAATTTACCATATACGTATACTAAGTAGAACTATACATGGGAATGCAGGTGACAAATCAGGTGTTTAGGTACGCGAAGAAAGCTGGAGCGAGCTACATCAACAAGCCAAAGATGCGACACTACGTCCACTGCTATGCCTTGCACTGTCTGGACGAGGAGGTGTCGAACGAGCTTCGTAGGGCGTTCAAGGAGAGAGGAGAGAACGTTGGAGCGTGGAGACAAGCATGTTACAAGCCCCTTGTGGCCATCGCAGCGCGTCAAGGTTGGGATATTGATGCCATATTCAACGCCCACCCTCGTCTTTCCATTTGGTACGTTCCCACCAAGCTCCGTCAGCTTTGTCACGCCGAGAGAAACACAGCCGCCGCTTCCAGCTCTGTCTCTGTCGGCAGTGCTCACCTTCCCTTCTAG