Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09708 LG2 34287601 34289577 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to bacterium, camalexin biosynthetic process, floral organ senescence, systemic acquired resistance, salicylic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, regulation of jasmonic acid mediated signaling pathway, regulation of salicylic acid mediated signaling pathway, floral organ senescence, regulation of ethylene-activated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, regulation of jasmonic acid mediated signaling pathway, regulation of brassinosteroid mediated signaling pathway, negative regulation of transcription, DNA-templated, defense response to fungus, response to bacterium, positive regulation of salicylic acid mediated signaling pathway, indole glucosinolate biosynthetic process, regulation of jasmonic acid mediated signaling pathway, response to bacterium, defense response to fungus, induced systemic resistance, jasmonic acid mediated signaling pathway, camalexin biosynthetic process, negative regulation of leaf senescence, defense response to oomycetes, defense response to bacterium, response to bacterium, defense response to fungus, regulation of salicylic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, response to salicylic acid, induced systemic resistance, jasmonic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, negative regulation of transcription, DNA-templated, floral organ senescence, response to jasmonic acid, regulation of ethylene-activated signaling pathway, response to reactive oxygen species, regulation of brassinosteroid mediated signaling pathway, floral organ senescence, defense response to bacterium, response to salicylic acid, response to insect, regulation of jasmonic acid mediated signaling pathway, positive regulation of salicylic acid mediated signaling pathway, response to reactive oxygen species, defense response to bacterium, leaf senescence, regulation of transcription, DNA-templated, induced systemic resistance, jasmonic acid mediated signaling pathway, response to osmotic stress, regulation of response to water deprivation, regulation of transcription, DNA-templated, induced systemic resistance, jasmonic acid mediated signaling pathway, response to jasmonic acid, positive regulation of salicylic acid mediated signaling pathway, regulation of jasmonic acid mediated signaling pathway, regulation of transcription, DNA-templated, regulation of ethylene-activated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, indole glucosinolate biosynthetic process, response to bacterium, defense response to fungus, regulation of salicylic acid mediated signaling pathway, induced systemic resistance, regulation of salicylic acid mediated signaling pathway, response to salicylic acid, leaf senescence, regulation of ethylene-activated signaling pathway, systemic acquired resistance, salicylic acid mediated signaling pathway, positive regulation of salicylic acid mediated signaling pathway, leaf senescence, defense response to oomycetes, regulation of transcription, DNA-templated, cellular response to hypoxia, regulation of jasmonic acid mediated signaling pathway, regulation of salicylic acid mediated signaling pathway, leaf senescence, response to osmotic stress, regulation of jasmonic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, response to salicylic acid, systemic acquired resistance, salicylic acid mediated signaling pathway, response to bacterium, camalexin biosynthetic process, defense response to fungus, regulation of response to water deprivation, response to jasmonic acid, negative regulation of transcription, DNA-templated, regulation of salicylic acid mediated signaling pathway, defense response to oomycetes, defense response to fungus, regulation of brassinosteroid mediated signaling pathway, regulation of defense response, regulation of ethylene-activated signaling pathway, indole glucosinolate biosynthetic process, response to insect, regulation of jasmonic acid mediated signaling pathway, regulation of response to osmotic stress, defense response to fungus, defense response to bacterium, response to jasmonic acid, regulation of jasmonic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, camalexin biosynthetic process, regulation of response to water deprivation, defense response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway, cellular response to hypoxia, regulation of jasmonic acid mediated signaling pathway, defense response to fungus, induced systemic resistance, jasmonic acid mediated signaling pathway, defense response to bacterium, response to bacterium, defense response to bacterium, systemic acquired resistance, salicylic acid mediated signaling pathway, cellular response to hypoxia, induced systemic resistance, regulation of jasmonic acid mediated signaling pathway, regulation of defense response, defense response to bacterium, regulation of brassinosteroid mediated signaling pathway, regulation of brassinosteroid mediated signaling pathway, indole glucosinolate biosynthetic process, cellular response to hypoxia, regulation of jasmonic acid mediated signaling pathway, regulation of jasmonic acid mediated signaling pathway, regulation of stomatal closure, regulation of jasmonic acid mediated signaling pathway, regulation of salicylic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, defense response to fungus, induced systemic resistance, negative regulation of transcription, DNA-templated, negative regulation of leaf senescence, defense response to bacterium, defense response to bacterium, regulation of jasmonic acid mediated signaling pathway, regulation of response to osmotic stress, response to bacterium, regulation of salicylic acid mediated signaling pathway, defense response to bacterium, defense response to bacterium
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, protein binding, sequence-specific DNA binding, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/T 34288103 intron_variant
T/C 34288276 intron_variant
A/T 34288392 intron_variant
T/A 34288393 intron_variant
T/G 34288508 missense_variant p.Lys137Gln
T/A 34288853 intron_variant
C/T 34288899 intron_variant
G/T 34288944 intron_variant
A/C 34289200 intron_variant
G/A 34289362 synonymous_variant p.Ser72Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09708.1
MNNTLITELLLGLDYATQLKFLLQKPVDPDASAAAKELLTNVHRSFAQTLSILTSSHPAMPQDQLAQNLLISGEDASQAASIDPRSDDSSESRKRSFPLSKDRRVKKACFVSDWGWGGGAERIWKTEQTWAIVSQTTEDDHAWRKYGQKDILNSQFPRSYFRCTRKFEQGCKATKQVQRLEENPDMYNITYIGFHTCKDTLKAPQMVTCSETWDSFLENSHEDLNVPNEQKQLDPPVRSQSPIVKQECLNDETDPSDLSDANLWSDLKDFELSSDKPDLKISSAFMYLLSEFGHEF*


CDS Sequence:
>Vu_09708.1
ATGAACAACACCCTCATCACAGAGCTTCTTCTCGGTCTCGACTATGCCACTCAGCTCAAGTTTCTGCTTCAGAAACCTGTTGACCCAGATGCCTCTGCTGCAGCTAAGGAACTGCTCACCAATGTGCACAGATCTTTCGCTCAAACTCTCTCTATCTTGACTTCTTCCCACCCTGCAATGCCTCAAGACCAGCTTGCTCAGAATCTCCTCATTTCCGGGGAAGATGCCTCGCAGGCTGCAAGCATTGATCCCAGGTCTGACGATTCATCTGAGAGTAGAAAGAGATCGTTTCCCCTCTCAAAGGATCGCAGAGTCAAGAAAGCCTGTTTTGTCAGTGATTGGGGTTGGGGAGGGGGTGCTGAGAGGATTTGGAAGACTGAACAGACATGGGCTATAGTTTCCCAAACTACTGAAGATGATCATGCGTGGAGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCCAGGAGTTACTTCAGATGCACTAGGAAGTTTGAACAAGGTTGCAAGGCCACCAAACAAGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTACATTGGGTTTCACACATGCAAAGACACCCTCAAGGCTCCACAAATGGTCACATGTTCTGAAACTTGGGACTCATTTCTTGAGAATTCCCACGAAGATTTAAATGTTCCAAATGAACAAAAACAACTCGATCCTCCTGTGAGATCACAAAGCCCAATTGTTAAACAAGAATGTCTCAATGATGAGACTGATCCCAGTGATCTTTCAGATGCCAACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAGTGACAAGCCTGACTTGAAAATATCATCTGCATTCATGTACTTGCTCTCGGAGTTTGGACATGAATTTTGA


Promoter Sequence:
>Vu_09708::LG2:34289577-34291577(-)
AACAAATGCAAACAAAGTCATCACACAATCAAATCAATCATAATTTGTAATTCAAACAGTTATATCATGCATAAATCAATACTAATTTATCGTACCTTTATTAAAACTTTCAACAAAATTTTGTCCTTAAATTCTACGCTCACAAAATGCTCTAAAAACACAAAAACATTTTAGATTAATGATCCAAACATACCTTTAGGATCACATAGAACCATGGTTCCTAAAGAACTCTCTACATGCAAAACCACAATGTTCACATGCATCCCAAGTACAAAATAATTCTAAAATAGGATTGAAATTAAACTTATTCTACCAAAGTAACTAATCAATTAAAAATGTTGTCCTTGCCATCATGAACATCAAGACGGGTTGAATCTTCAAAGAAATAAAAAATAACGTCATAATCTTAGAAAAAGAATAAAGTAGTTATAAAAAGATAAATATTTTATAAAAGTAAATTTAATTCTTACAAAGTTATATTCATACTTTCCTTCTTTAATAATAAAACATTAAAGTATTCATCATATAAAACATCTTCATTCTTTTAATCAATTTCTCGGGTCTCATAATTTTAATTCATACTTTTTCTTTTAACTTATTTGAAGATGGTATATTTTGGATTTTAGATTGCAAAAACAAATAAAAAAATAAAATAAAGAATAAAAATCATCAAAAGTTGGAGTATGGGATAGATATTAATAAAATACACTTTTATATAATATTTCACAGATAAACCCTTGTTCGGTTATTGTGCACTATATCTTTTCAAATTTCGTTAGACATAAATCATGGTAATAAGACAAACATAACATTTAAGACCTTTTTTATCCGTTAATATATCTATACATCGAATAAATTAGTTCATAAATTTGTGAGATACTATCAATAGTTTCTGAGGCAAGAAAATTGTCTAAAGATTTAATGAAATTATTATTATTTTTTAATAAATTAAAATCCACTTAATCACCTTAACTCCAAGAGTTGATTTATTTTCAAAGTATAATGGTAGCATGTTAAAAAAATATACCTTATCTAAAAGAAAAAGATTTTTATTCCTAAACTTTTATGCAAATTAAAATTGGTATCTATGTAAAAATTTTGATATATTTAATTTTCAAAGTTTAAAAATAAATAAATATAATTATTTTAATTCAATTACATTATATTTTTAATACGTGTTAAATGTATTTTATGACAGTATTTAAATCATTTACATATTTAATATGTTTATGTTTTAATATAAGTTAAAAAAATGTTATTGATATATAAAAAAAATTAACATCATTACATTAAAAATACAATACCTATTTATTTTTTAAATTAGAAAATCAAAATATATCAAACTTTTTGATGAAAACTAATTTTAATTTTAAACTAAAAATATATTTAATTATCTAAAAAAATAATAATAATCAGTAAAAAAAGTTTATAAAATTTAAAACTATAGTTGTGTATTAGCTTCCCCAAAAGCTTATATTTTTATCTATATAATAATATTATCGAGGTTGTTATTATTTCTTGATCTGATAATATAGGTAAAAACACTGTTAGTTTTACAAAGGAGAACCCAGAAAACAACACATAGTGAAAATTTAAGAAGCATTAAAAGGAGCAGCGTGGTTGTGTAGTACAAAGAGTGACCTTTTTCTTTTTAAATTAAGAAAAATAAAGAGTAGTGAGGTGCAAGTGGGGAAAGTTGTAATTTTGAAGGAAAAGAAAAAAGAAAGAAAATAATGCAGCGTCAGGCTTGCATCAGAAGAGCAACGTCATGTTTAGGTTTGTAAGCAAAGTTATTACCTGTGGACAAATTTTCTCTTCCATGATGGTTCAACATCATCCCTCCCTTCTCAACGTTTTCCATTCACTGCTATCTCTCTTTCCTCGCAAAAACCCACCTCTTTCTTCCTTCTCTCCATACCCACCATTCATTCCCCTAATCTTCAATTTCTTCTAAACTATATATCAATACATCCTTAGCCACCAACTACACACCCACTACC


Gene Sequence:
>Vu_09708(-)
ATGAACAACACCCTCATCACAGAGCTTCTTCTCGGTCTCGACTATGCCACTCAGCTCAAGTTTCTGCTTCAGAAACCTGTTGACCCAGATGCCTCTGCTGCAGCTAAGGAACTGCTCACCAATGTGCACAGATCTTTCGCTCAAACTCTCTCTATCTTGACTTCTTCCCACCCTGCAATGCCTCAAGACCAGCTTGCTCAGAATCTCCTCATTTCCGGGGAAGATGCCTCGCAGGCTGCAAGCATTGATCCCAGGTCTGACGATTCATCTGAGAGTAGAAAGAGATCGTTTCCCCTCTCAAAGGATCGCAGAGGTTCCTACAAACGAAGGTCTTACTTCACTCTTTCTCATTTCCCTTCTGTGATCTATTTTACCTCTTTCTACAGATTTTTAATTCTTTATAACAGACTGATTTTGATTTGTTCACCAACTAATTTTAGTTTACTAAAAAGTTCTTCTTTTTTTTTAAATCTTTTATATACTAAACCTTACAGAAAGCTTATCCATGATGAATTATACTTTGGATGTTGCTGTGTTACTTTCTCAGTCAAGAAAGCCTGTTTTGTCAGTGATTGGGGTTGGGGAGGGGGTGCTGAGAGGATTTGGTGAATTGGGATGTGTACGGACGGAGTTCTTCTTATAGTCCTATTGTCCATATGAGTAAAGCTACTCTTTCTTGATGAAAAAAAAAAAAAATAGAAAACTAAAGCTTTGAGGTTAAGTTAACTATTGGAGTTTTGGAATATTTTAGTTCTCATTCTTTGATTTGATTACTGTGTGCTTCAAGTGGGTTCCTTTAGTTTTTTAGCTTAGTGGAGTGGCCTGCCTTGACATGATCACATGGAACAGTACAATTATTTCACATAATTTTTTTTTTCTTATATACTTACCTGCATATTTACAGAAAAAAAGGCTTATATATATATATATATATGGAATGGCTATTTTTCTTCAGATATTTTTATTCACAATAATGTTGTATTATTACACGAAATAACATGCGTGGCATTTCTTAAATTGGTGCGCAGGAAGACTGAACAGACATGGGCTATAGTTTCCCAAACTACTGAAGATGATCATGCGTGGAGAAAGTACGGACAAAAGGATATTCTAAATTCTCAGTTTCCCAGGTAATCATTGTTTTGCACAGTAATTTTTCCTCCTTCCGTGTGAACCAGGCAAAGATATTCACTTGTTCAATTCGAGCAAAGATTGCATCACTATTCATTTTCTTTTTCTATTTTTGATTCCTTTCATCTTTTAGTTAAGCATGACAGTGATCTGTGTAGAAATATCATATCATCTTGAAAAAACACCTTAATTGGGAATGCTAGAAGTACATTCTTTTCTGTGTTTGTAGAAACTGAACTCAATCACGCAACTATAGGATATTAATGCAGAAACCCGAATGAGGAAACTTTGCTATACACTCAGACTACTACTTAGGACACTCAAACTTACTAGTGTTTAAATTTTCATGTGAATAGTTGAAGTGTATTTTTGTTACACAAACTTATTGTCTTCTAATTATAACACATTTATTGATAAATAATTCTCAGGAGTTACTTCAGATGCACTAGGAAGTTTGAACAAGGTTGCAAGGCCACCAAACAAGTGCAACGGTTAGAAGAGAATCCTGATATGTACAATATTACGTACATTGGGTTTCACACATGCAAAGACACCCTCAAGGCTCCACAAATGGTCACATGTTCTGAAACTTGGGACTCATTTCTTGAGAATTCCCACGAAGATTTAAATGTTCCAAATGAACAAAAACAACTCGATCCTCCTGTGAGATCACAAAGCCCAATTGTTAAACAAGAATGTCTCAATGATGAGACTGATCCCAGTGATCTTTCAGATGCCAACCTGTGGTCTGATTTGAAGGATTTTGAACTGTCCAGTGACAAGCCTGACTTGAAAATATCATCTGCATTCATGTACTTGCTCTCGGAGTTTGGACATGAATTTTGA