Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_09953 LG2 38683353 38684565 PREDICTED: dof zinc finger protein DOF3.5
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   DNA-binding transcription factor activity, DNA-binding transcription factor activity, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/C 38683411 missense_variant p.His20Pro
G/A 38683677 missense_variant p.Val109Ile
G/A,T 38683787 synonymous_variant p.Pro145Pro
A/G 38683804 missense_variant p.Glu151Gly
C/A 38683849 missense_variant p.Pro166His
T/C 38684036 synonymous_variant p.Leu228Leu
T/G 38684253 stop_lost p.Ter301Glyext*?
A/G 38684271 3_prime_UTR_variant
A/T 38684448 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_09953.1
MFPHTLITAAALQHMLQHHHHFPTPMEQRSRWKPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVGGGCRKNRRGKSSSRHNQTQRSFVSASSDDTESSPEDAHRNNNGSREIDMALVFAKFLNPKQNVGEDNNASSSSNNYFTPPGVQTENDIAVVQSPNKGLSSDPVIVDSDAVVAIENFGREELSLGEIDELEKLLGVSGDEDGLWCDATLSSSVTWEAPVKEMQLQELEYSMPLNENDAQLLPITSASTLHSMSDTCWSTWSSFDLSAMEVFSSTP*


CDS Sequence:
>Vu_09953.1
ATGTTCCCACATACCCTTATTACTGCCGCTGCCCTTCAACACATGTTGCAACATCATCATCACTTTCCAACCCCAATGGAACAACGTTCGAGGTGGAAACCCAACATTGAGGTCGCGCCCAATTGCCCTCGTTGCGCTTCCACCAACACCAAATTTTGTTACTACAATAACTACAGCTTGTCGCAGCCCCGCTATTTCTGCAAAGCCTGCAGACGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGAAAGAACCGCCGCGGCAAGTCCTCCTCGCGCCACAACCAAACCCAACGCTCTTTCGTCTCCGCTTCTTCTGATGACACCGAGTCTTCACCTGAAGATGCCCATCGAAACAACAACGGCTCTCGTGAAATAGACATGGCCCTTGTGTTCGCCAAATTCTTGAACCCGAAACAAAACGTTGGAGAGGATAACAATGCCTCCTCTTCTTCCAACAATTACTTCACACCGCCCGGCGTTCAAACGGAGAATGATATCGCTGTTGTTCAGTCGCCGAACAAGGGTTTGTCGTCGGATCCTGTCATTGTTGACTCCGATGCAGTAGTGGCAATTGAGAATTTCGGTAGGGAGGAATTGAGTTTGGGTGAGATTGACGAGTTGGAGAAGCTTCTGGGTGTGAGTGGTGATGAAGATGGTCTTTGGTGTGATGCTACCTTGTCCTCTTCCGTTACTTGGGAAGCACCCGTGAAGGAAATGCAGTTGCAGGAATTGGAATACTCGATGCCGTTGAATGAAAACGATGCCCAATTATTGCCCATCACTTCTGCGTCTACCCTGCATTCAATGAGTGACACTTGCTGGAGCACTTGGAGCTCCTTTGATCTTTCAGCCATGGAAGTGTTCTCATCAACTCCTTGA


Promoter Sequence:
>Vu_09953::LG2:38681353-38683353(+)
GAGAACTAATTTTGAGATACATATATATTACAAAATACTTATATAGCCCATGTGATAATACATGATTTAAATTATTTTAAATTTAAATAAATAAAATTTTAACTTAAAAGATGAAACACTATAGTTTTGGTACAGATAGGAGCACAAGGTGTTCTGGAGCATGAATAGGTCATTGGGACTTATTATCGGTCTAGTCCATCATCATGGTGGCTTTATTTATACTTCTGATTTCTGAAATTCAATATTCATGAAGGTCCAAGCACATGTGCTGTGTATTATATAATTATTTTGTTGATGCATGCACGCATTCCTTATAGATGCATTGTTAGTTGAAAGATACGTATGTTAATGTTAGAGGGAGTGAAGTACGTAGGAACTAACTGCAATTTGATTTGTTGGAAGATCGTTAACCATGCTAGATTTAATGAACTAATGATAATAAAAGTTTAGAGAAACATGCAAAAGAAAAGAAATAGCAGAAGGAGTTTGAGACGTGGAAGCCACTGATCCGGAAGCATGAATACGTATGATAGCATCTTTCGTGAAAGCAACGTTAAACCCCCACGTGCCTCGAATGTTCTCTTTGGATCGAATCTCCAATCCTACGATTGCAACCTTTAGCTGCACCGTTCTCTCTTTCTGTTCCTTTCATGTAACATCAATTCGTATTTTAATCCCACATACCACCGCAATATGCATGTATCCCTACCCATCAACCATTATTACAAACTTCTCCACTCCAACTTCACTTGGACTCGGTTTCAGAGTACCAGGTTTTTTATTTTAGGAAAATTCCTATCAATCGTATATATGGATAATATCCATAGTTATGATAATCAGAACAAAATTCAGGAGTGGTGTATTTTACAACAATCATTGTCATTTGTTTAGTTTAGTTTATAAGATTAATGTATTTAGTTTGATTGGGTTGAATCCTTGGAAGGTGAGGTTGTGAAAATGTGTTAACTAAAATTTGAAAGTATGGAAATGAATGAAGTGAGCACGGGAATCAAAGTTTAAGTCTAAGTTCTAGGTTAGATAAAAATAAAAATAAATTATTATATAAAAAATGAAAGATCCGTTATCGTAATATTTTAAAGTTTTGGATAAAAAGTGATGTTTTAGTTATCAAGTATGATTGAGATTGCTAATGAAATAAAGAAAAGAAGAACGCAAACAAATGTACGGTGATGTGGGGATTTAGTTTTAGCAATAGGAAACGAAAGGATGGGAAATGTGCCACGTATCCTCGTTAAGCACGTGGTGGTGCTTTCCATACCCGCAACTCTAGCCTTCCATATGATGTCAATACATTACTGTATATAGTATACATATATGTCAAACTTATTCTATAAACCTTAATTCCCTCCTCTGCATCCAGCACACTGCATTGTTTCACACATTAATAATTATTATATCTATTGGGTAATGCAGAACTACCTGAATTTAACCGTGCCTGTGGCACCAACTACATGATCAATTAGCAATAACTCGTCAAATCAATATTGAACTTTCCTTAAACACATAAACGTCTCTAATTCACAAACTAGTCTCGGTCAATTCATGGTTTTAAGGTGGGTTTGAATGTATGATATATATGATTTGATGTGATGAAGATGGAGGTAGCATGCATATGATGGATGATTTTTTTCCACGCGGCTTGTTAAAGAATGAGTGGGGAAGCAAGTGTTTGACTTATCAACCTCAATCACTCTCACAAAGTAACCCCAATGAAGAAAAATCCAGTGTCGAAGGAGACACGCCCCATCCGCCTATGAAACAGCACAGCATAACATGAAATTCACATCAACATCACAGACTCACACACACACATACACATACACATGCACACCCTTCCTTAATTTTAACGATTCCCCAACCGCCCACGTTCCTCCAACGCTTCCACCACACATATATTCACACACCAACAAATCCCTCTCCAATCTCACTCTCACTCCATCCCCACCCACCCTTCTTATATCACACCTCTCCCAAATAAA


Gene Sequence:
>Vu_09953(+)
ATGTTCCCACATACCCTTATTACTGCCGCTGCCCTTCAACACATGTTGCAACATCATCATCACTTTCCAACCCCAATGGAACAACGTTCGAGGTGGAAACCCAACATTGAGGTCGCGCCCAATTGCCCTCGTTGCGCTTCCACCAACACCAAATTTTGTTACTACAATAACTACAGCTTGTCGCAGCCCCGCTATTTCTGCAAAGCCTGCAGACGCTACTGGACCAAAGGCGGCTCTCTCCGCAACGTCCCCGTCGGCGGCGGCTGCCGAAAGAACCGCCGCGGCAAGTCCTCCTCGCGCCACAACCAAACCCAACGCTCTTTCGTCTCCGCTTCTTCTGATGACACCGAGTCTTCACCTGAAGATGCCCATCGAAACAACAACGGCTCTCGTGAAATAGACATGGCCCTTGTGTTCGCCAAATTCTTGAACCCGAAACAAAACGTTGGAGAGGATAACAATGCCTCCTCTTCTTCCAACAATTACTTCACACCGCCCGGCGTTCAAACGGAGAATGATATCGCTGTTGTTCAGTCGCCGAACAAGGGTTTGTCGTCGGATCCTGTCATTGTTGACTCCGATGCAGTAGTGGCAATTGAGAATTTCGGTAGGGAGGAATTGAGTTTGGGTGAGATTGACGAGTTGGAGAAGCTTCTGGGTGTGAGTGGTGATGAAGATGGTCTTTGGTGTGATGCTACCTTGTCCTCTTCCGTTACTTGGGAAGCACCCGTGAAGGAAATGCAGTTGCAGGAATTGGAATACTCGATGCCGTTGAATGAAAACGATGCCCAATTATTGCCCATCACTTCTGCGTCTACCCTGCATTCAATGAGTGACACTTGCTGGAGCACTTGGAGCTCCTTTGATCTTTCAGCCATGGAAGTGTTCTCATCAACTCCTTGATAATTCGATCTGATGATTTTACATGAACTTCATAAGATCTGATCTTCTTCTTATTATTTGAAAAGAAGAGAAGAAGCAGACACAGTTAATTAATTACGCTGCGTACCTCACATGTGTTCCTATATTGATAAAGGTAATTATAAAAAGGTAGAATCTTATAGAAATTGTTTGTGTTTAGTGGATGTAGAATAAAGTTGTATTTCGGGTCGTAGAAATGATGTTGAGAAAGCTACATATACCCTCGGATCTGTACCTTTTGGAATATATACATACTAATGATATAGATACTATAAAGTCGAATTTTCTATGC