Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10365 LG2 44146383 44149421 PREDICTED: receptor-like protein kinase HAIKU2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, protein autophosphorylation, response to oxidative stress, innate immune response, innate immune response, innate immune response, protein autophosphorylation, seed germination
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, protein binding, protein binding, kinase activity, protein binding, protein kinase activity, protein serine/threonine kinase activity, protein binding, peptide receptor activity, protein kinase activity, protein binding, protein kinase activity, identical protein binding, protein binding, protein binding, protein serine/threonine kinase activity, peptide binding
SNP Position Effect Amino acid change
C/A 44146388 synonymous_variant p.Ser2Ser
C/A 44146572 missense_variant p.Leu64Ile
T/C 44146573 missense_variant p.Leu64Pro
C/G 44146583 synonymous_variant p.Val67Val
G/A 44146655 synonymous_variant p.Ser91Ser
G/A 44146800 missense_variant p.Glu140Lys
G/C 44146934 synonymous_variant p.Val184Val
A/G 44146995 missense_variant p.Met205Val
G/T 44147129 synonymous_variant p.Gly249Gly
G/A 44147240 synonymous_variant p.Ser286Ser
T/C 44147594 synonymous_variant p.Ala404Ala
G/A 44148135 missense_variant p.Ala585Thr
A/T 44148180 stop_gained p.Lys600*
A/T 44148181 missense_variant p.Lys600Met
T/A 44148219 missense_variant p.Ser613Thr
T/G 44148225 missense_variant p.Leu615Val
C/T 44148235 missense_variant p.Ser618Leu
T/A 44148299 synonymous_variant p.Arg639Arg
A/T 44148395 upstream_gene_variant
A/G 44148848 upstream_gene_variant
C/A 44148957 upstream_gene_variant
A/G 44148965 upstream_gene_variant
G/A 44148975 upstream_gene_variant
T/C 44149031 upstream_gene_variant
C/T 44149130 stop_gained p.Arg685*
T/C 44149260 missense_variant p.Phe728Ser
T/G 44149412 stop_lost p.Ter779Gluext*?
A/G 44149418 missense_variant p.Ile781Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10365.1
MSAAFRLLLLLSLFSLLTAQQHDQRQILLNLKSSLKSSNFSKLFDSWNDTNSVCSFNGVICNTLRSVTEINLSNQNLTGVLPFDSLCNLPSLQKLAFGYNGLYGNVSEDIRKCVTLRYLDLGNNLFSGPFPDISPLNQLEYLFLNKSGFSGTFPWQSLLNMTGLLQLSVGDNPFDFTPFPKEVVSLKKLNWLYLSNCTLGGKLPMGLGNLTELTELEFSDNFITGEFPAEIVNLRNLWQLVFFNNSFTGKIPTGLRNLKGLKNLDGSMNRLEGDLSELKYLTNLVSLQFFENNLSGEIPDEIGEFKGLKSLSLYRNKLTGPIPQKVGSWAEFDFIDVSENFLSGTIPPEMCKKGKMTALLVLQNNLSGEIPATYGDCWSMKRFRVSNNSLSGTVPPAIWGLPNAEIIDIELNQFEGSVASDIRNAKTLGSILARQNRLSGEIPDEISKATSLVTLDLSENQISGKIPEGIGELKELGSLHLQSNRLSGSIPESLGSCKSLNDIDLSRNLLSGEIPTSLGSFPALNSLNLSDNDLSGEIPGGLAFLRLSLFDLSYNRLTGKIPQALTLEAYNGSLSGNPGLCSIDAINSFPRCSSSSGMSKDMRDLVICFAIASILLLSCLGVYLQLKRRKEEGERFGERSLKEESWDVKSFHVLKYGYTYKVNEKSDVYSFGVVLMELVTGKRPNEAEFGENKDLVSWVHNMARSKEGLRSAVDSRIPEMYKEEACKVLRTAVLCTGTLPALRPTMRAVVQKLEDAEPCKLVGIVISKDGGEKKIGVNDKK*


CDS Sequence:
>Vu_10365.1
ATGTCCGCCGCCTTTCGCCTCTTGCTTCTTCTCTCACTCTTCTCTCTACTCACCGCCCAACAGCACGACCAGCGTCAAATCCTTCTCAACCTAAAATCCTCTCTCAAGAGTTCAAATTTTTCAAAACTCTTTGACTCATGGAATGACACCAACTCCGTTTGCAGTTTCAACGGAGTAATTTGCAACACCCTCCGTTCGGTCACCGAAATCAACCTCTCCAACCAAAATCTGACTGGGGTTCTTCCCTTTGACTCTCTCTGCAACCTTCCATCGCTCCAGAAACTCGCGTTCGGCTACAACGGCTTGTATGGCAATGTTTCAGAGGACATTAGAAAATGCGTCACCTTGCGCTACTTGGATTTGGGAAACAACCTTTTCTCTGGTCCCTTCCCCGACATATCTCCTCTTAATCAGTTGGAGTATTTGTTTTTAAACAAAAGTGGATTTTCGGGCACTTTTCCGTGGCAGTCGCTGTTAAACATGACGGGTCTGTTGCAGTTAAGTGTCGGAGATAACCCTTTCGATTTCACGCCGTTTCCAAAAGAGGTTGTGAGTCTCAAGAAGCTGAATTGGCTCTACCTGTCCAACTGCACCCTCGGAGGGAAACTTCCGATGGGACTTGGCAACCTCACGGAGCTCACGGAATTGGAATTCTCCGACAATTTCATCACCGGCGAATTTCCCGCGGAGATTGTGAACCTTCGGAACCTCTGGCAGCTTGTGTTTTTCAACAATTCCTTCACGGGGAAGATTCCAACCGGGTTGAGAAACCTCAAGGGGCTTAAGAATTTGGACGGCTCCATGAATAGACTCGAAGGGGATCTTTCTGAATTGAAGTACTTGACCAATCTGGTTTCGCTTCAATTTTTTGAGAACAATTTGTCAGGGGAGATTCCTGATGAAATTGGCGAATTCAAAGGCCTCAAGTCCCTGTCTCTGTACAGGAACAAATTGACAGGTCCTATTCCTCAGAAGGTTGGTTCCTGGGCTGAGTTTGATTTCATCGATGTGTCGGAGAATTTTTTGTCGGGGACTATTCCGCCGGAAATGTGTAAAAAGGGGAAGATGACCGCACTGCTCGTGCTTCAGAACAATCTCTCCGGCGAGATTCCGGCCACCTATGGAGACTGTTGGAGTATGAAGCGATTCAGAGTCAGCAATAACTCGCTCTCGGGTACCGTGCCACCGGCGATTTGGGGATTGCCCAACGCTGAAATAATCGATATTGAACTGAATCAGTTCGAAGGTTCGGTTGCTTCGGATATCAGAAACGCCAAAACATTAGGTTCAATATTAGCTAGGCAAAATCGGTTGTCCGGTGAAATACCCGATGAAATCTCCAAAGCAACGTCGTTGGTGACTTTGGACCTGAGCGAGAATCAGATTTCGGGGAAGATTCCAGAAGGAATCGGGGAGCTTAAAGAACTAGGTAGTCTTCATTTGCAGAGCAATAGGTTATCAGGTTCGATACCGGAATCTCTCGGTTCCTGCAAATCCCTCAACGACATTGACCTATCGAGGAATTTACTCTCTGGAGAAATCCCCACCTCGTTGGGTTCTTTCCCCGCGCTGAATTCTCTGAATCTTTCAGACAACGATCTCTCTGGTGAAATTCCTGGGGGTTTGGCGTTCCTCAGGTTAAGCCTCTTTGATCTATCGTACAACCGATTAACGGGTAAAATTCCTCAGGCTCTAACCCTCGAAGCTTACAACGGAAGCCTCTCCGGAAACCCCGGTTTGTGCAGCATCGACGCCATCAACTCCTTTCCTCGTTGCTCTTCTTCCTCTGGCATGTCCAAGGACATGCGTGATCTCGTAATTTGCTTCGCGATAGCGTCGATATTATTGCTTTCGTGTTTGGGCGTTTACTTGCAGCTGAAGAGGAGGAAGGAAGAGGGAGAAAGATTCGGAGAACGTTCCTTGAAGGAAGAATCCTGGGACGTGAAATCGTTCCACGTGTTAAAATATGGTTATACATACAAAGTGAATGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGCTGATGGAGCTGGTAACTGGAAAAAGGCCAAACGAAGCAGAATTTGGGGAGAATAAGGATTTGGTGAGTTGGGTCCATAACATGGCACGAAGCAAAGAGGGTCTTAGGAGTGCTGTGGATTCGAGGATTCCAGAAATGTATAAAGAGGAAGCTTGCAAGGTTTTGAGAACCGCGGTTCTGTGCACGGGAACTCTTCCGGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAACTTGAGGATGCTGAGCCTTGTAAACTGGTTGGGATTGTTATCAGCAAAGACGGTGGTGAAAAGAAAATAGGAGTGAATGATAAGAAATAA


Promoter Sequence:
>Vu_10365::LG2:44144383-44146383(+)
AATCTTCGAAAATTAAATTACAACTTATTTTTATTTTTTTAAATTAAAAACGAAGAGAAAAAATATATGATAATAATGTTTATTGTTGAAAATTCGATCCTTGATAACCAAATTCTTAATGGTAGATGAATAAGTTTAAGAACTAAAAGTAATATATATTATATTTTTAAAATAGATATATTTTGAGAAAAAAAAAATAATTCAAATTACTATTTGAGTACTCACCTTTTTTAATGAATAGATTAAGTTTAAATAAAATATAAATCTAATTAAAAATTAATGTAATTAAAAATTTAATTTTGTTATGTGTGTTTTGAGTCACTACTCTATCTAATTAAAAATTAATGTAATTAAAGTTGATTTTGTTAACTGTAATATTTATTCACTTTGTTAATAAATGAGGTTTCAATTAAAATAAAACGCAAATCCAATTAAAAGTTAAAATTGTTTTCTATTATACCCTTCATTTTGTTAGTTTTATTCAATATAAAACTTAATTAAGATATATATATATATATATATATATATTGTTAGATTTTCTAAGTTAAACAAGATTTATGATGTTGGTGTTACAGGATTCGGATAGCATAAAAAAGTATAAAGTTTCTTTTGGTTTTTAAATAATTAATATAATAAATGAAACTAATTAAATCAGAGTGCCTTTATCCTAATCAAATTCAAATTACTCGCGAAACGTATTGAAACTATGAAAAATTTCTTAAAATTTAAACTAATCTAAACTCTATAATTTATGAATGTGGATACATTGTAATTATTACATAAATAGTGGTAAAAGTGTATACATTTTTCATTAGCAAAAATAAAAATTATTCGATATGACAAAGTGATTAGTTTTTAATTTTTCTACTCAAGTTACTAGTTTTTCTTACACTTTATCTCGATAGAAAGATAACTTTTCTTCTGTTCTCATCTCAATTATTTATATTTGTTTTTTGTATTGATGTTAATAACTAGGTGGTGTATAGGATTGACTTAGTGTGGAACGAAATGTTCAATTAACAAAGTCTTAAAGGAATTGAGTAAAAGAGACATACATTTGGAATTATAAAGGATAGACGTTAAAGCGGTAACGACGGTTATTAATGAGTAGTTAATAGAGTTATTAATGAACAATTATCACGTTTAATTGTCTTGTCTTATTTTGGTTTATAAATAAGTGTTCAGTTTAAAGGTAAAAAATATTTTTAAAGAATCAAAGCATGCGCAATAAGTCTCTTGAGAAATATATCTCACTTGAGCGTCAAAGTGATTGTTGCAAAACCATCCGAGTTTGAATGTCTGACTACGAGAGTGCACTGATTAAGAGACACATAGTTAGAGTTTGGACAACAAAAGCCCTCGACCCCAGAAACAATAATTATTACATAAATAATCATAAAAGTGTATATATTTTGTGTTAGTAAAAATAAAAATTATTCAATATCAATATGATAAAGTGATTAATTTTTAATCTTTCTGCTGAAGTGACTTGTTTTACTTACAATTTGTCTCGAGAGGAAGGTAACTTTTCTTCTGTTCTAATCTCAATTAATTGTATTTGTTTTCTGTATTGATGGTAATAACAAGGTTATGTTTTTTTATCCAATTATTGCGTTGATGCCAATCGTCCAAGTCAATGGTTGTACATACATTGAGACTGGCTGCTTTCAGTTTCATCCTAACATCCGTCCACGACTCTTCCACACGCTGGTACGAGAGAAGTAGTAAGTGCTTTAGGAAAAGTAGCATCAAGAAAATACGCGGTAAAAACAATAAAAAACAAGAACGAGAGGAGAAACGACCGTTGTAACAGGAATACGAAATACACAACCTCGTAGTAAACTAAGCCATGTTCCAACGACGCCGTTTTGCTTAATTGCTTTACCGTGACTTCATGGATAGACACACCAATGAGCGCCTTCTTTTTATTCAATTTGAGTACTTAACCCGTTTTAGTTGAAATTGAAAGTCGGAGACTCATCTTTCACACTTTCCAAACA


Gene Sequence:
>Vu_10365(+)
ATGTCCGCCGCCTTTCGCCTCTTGCTTCTTCTCTCACTCTTCTCTCTACTCACCGCCCAACAGCACGACCAGCGTCAAATCCTTCTCAACCTAAAATCCTCTCTCAAGAGTTCAAATTTTTCAAAACTCTTTGACTCATGGAATGACACCAACTCCGTTTGCAGTTTCAACGGAGTAATTTGCAACACCCTCCGTTCGGTCACCGAAATCAACCTCTCCAACCAAAATCTGACTGGGGTTCTTCCCTTTGACTCTCTCTGCAACCTTCCATCGCTCCAGAAACTCGCGTTCGGCTACAACGGCTTGTATGGCAATGTTTCAGAGGACATTAGAAAATGCGTCACCTTGCGCTACTTGGATTTGGGAAACAACCTTTTCTCTGGTCCCTTCCCCGACATATCTCCTCTTAATCAGTTGGAGTATTTGTTTTTAAACAAAAGTGGATTTTCGGGCACTTTTCCGTGGCAGTCGCTGTTAAACATGACGGGTCTGTTGCAGTTAAGTGTCGGAGATAACCCTTTCGATTTCACGCCGTTTCCAAAAGAGGTTGTGAGTCTCAAGAAGCTGAATTGGCTCTACCTGTCCAACTGCACCCTCGGAGGGAAACTTCCGATGGGACTTGGCAACCTCACGGAGCTCACGGAATTGGAATTCTCCGACAATTTCATCACCGGCGAATTTCCCGCGGAGATTGTGAACCTTCGGAACCTCTGGCAGCTTGTGTTTTTCAACAATTCCTTCACGGGGAAGATTCCAACCGGGTTGAGAAACCTCAAGGGGCTTAAGAATTTGGACGGCTCCATGAATAGACTCGAAGGGGATCTTTCTGAATTGAAGTACTTGACCAATCTGGTTTCGCTTCAATTTTTTGAGAACAATTTGTCAGGGGAGATTCCTGATGAAATTGGCGAATTCAAAGGCCTCAAGTCCCTGTCTCTGTACAGGAACAAATTGACAGGTCCTATTCCTCAGAAGGTTGGTTCCTGGGCTGAGTTTGATTTCATCGATGTGTCGGAGAATTTTTTGTCGGGGACTATTCCGCCGGAAATGTGTAAAAAGGGGAAGATGACCGCACTGCTCGTGCTTCAGAACAATCTCTCCGGCGAGATTCCGGCCACCTATGGAGACTGTTGGAGTATGAAGCGATTCAGAGTCAGCAATAACTCGCTCTCGGGTACCGTGCCACCGGCGATTTGGGGATTGCCCAACGCTGAAATAATCGATATTGAACTGAATCAGTTCGAAGGTTCGGTTGCTTCGGATATCAGAAACGCCAAAACATTAGGTTCAATATTAGCTAGGCAAAATCGGTTGTCCGGTGAAATACCCGATGAAATCTCCAAAGCAACGTCGTTGGTGACTTTGGACCTGAGCGAGAATCAGATTTCGGGGAAGATTCCAGAAGGAATCGGGGAGCTTAAAGAACTAGGTAGTCTTCATTTGCAGAGCAATAGGTTATCAGGTTCGATACCGGAATCTCTCGGTTCCTGCAAATCCCTCAACGACATTGACCTATCGAGGAATTTACTCTCTGGAGAAATCCCCACCTCGTTGGGTTCTTTCCCCGCGCTGAATTCTCTGAATCTTTCAGACAACGATCTCTCTGGTGAAATTCCTGGGGGTTTGGCGTTCCTCAGGTTAAGCCTCTTTGATCTATCGTACAACCGATTAACGGGTAAAATTCCTCAGGCTCTAACCCTCGAAGCTTACAACGGAAGCCTCTCCGGAAACCCCGGTTTGTGCAGCATCGACGCCATCAACTCCTTTCCTCGTTGCTCTTCTTCCTCTGGCATGTCCAAGGACATGCGTGATCTCGTAATTTGCTTCGCGATAGCGTCGATATTATTGCTTTCGTGTTTGGGCGTTTACTTGCAGCTGAAGAGGAGGAAGGAAGAGGGAGAAAGATTCGGAGAACGTTCCTTGAAGGAAGAATCCTGGGACGTGAAATCGTTCCACGTGTTAAGTTTCTCGGAGGGGGAGATTCTAGATTCCATCAAGCAGGAGAATCTGATAGGAAAGGGAGGTTCAGGGAACGTGTACAGAGTCACGCTTTCCAACGGAAAAGAGCTGGCGGTGAAGCATATTTGGAACACCGATGTACCCGCGCGGAAAAAGTCGTGGAGCAGCACTCCCATGCTTGGGAATAAGCAGGGTGGGAGGTCTAAGGAGTTCGATGCAGAGGTTCAGGCTTTGAGCTCCATAAGGCACGTGAATGTGGTGAAGCTTTATTGCAGCATAACGAGTGAAGATTCGAGCTTGTTGGTGTACGAGTATTTACCCAATGGAAGCTTGTGGGATCGGCTTCACACAAGTAGAAAGATGGAGCTTGATTGGGAAACGAGGTACGAAATCGCTGTTGGGGCAGCCAAAGGATTGGAGTATTTGCATCACGGATGCGAACGGCCCGTGATTCACAGAGATGTCAAATCTAGTAACATCTTGTTGGATGAGTTTCTAAAACCTAGAATTGCGGATTTTGGGCTTGCCAAGGTTATTCAGGCCAACGTTGGAAAGGATTCTTCCTCTCGTGTCATCGCCGGAACCCACGGTTACATTGCTCCAGGTAAATCATTTCGGATACTAATTATTTGAGTGTCATTAATTAATTATTATTACCGTGTTTATTAATGTCTTGATGTTGTTGGAATTGGTGCAGAATATGGTTATACATACAAAGTGAATGAGAAGAGTGACGTGTACAGTTTTGGAGTGGTGCTGATGGAGCTGGTAACTGGAAAAAGGCCAAACGAAGCAGAATTTGGGGAGAATAAGGATTTGGTGAGTTGGGTCCATAACATGGCACGAAGCAAAGAGGGTCTTAGGAGTGCTGTGGATTCGAGGATTCCAGAAATGTATAAAGAGGAAGCTTGCAAGGTTTTGAGAACCGCGGTTCTGTGCACGGGAACTCTTCCGGCTTTAAGACCCACCATGAGAGCTGTGGTTCAAAAACTTGAGGATGCTGAGCCTTGTAAACTGGTTGGGATTGTTATCAGCAAAGACGGTGGTGAAAAGAAAATAGGAGTGAATGATAAGAAATAA