Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_10665 LG2 47375282 47377311 PREDICTED: CBL-interacting serine/threonine-protein kinase 25
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to hypoxia, protein phosphorylation, defense response to fungus, signal transduction, response to hypoxia, cellular potassium ion homeostasis, protein phosphorylation, defense response to fungus, defense response to fungus, protein phosphorylation
Molecular Function   enables   protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
A/T 47375303 5_prime_UTR_premature_start_codon_gain_variant
C/G 47375520 5_prime_UTR_premature_start_codon_gain_variant
A/G 47375544 5_prime_UTR_variant
T/A 47375559 5_prime_UTR_variant
A/G 47375674 5_prime_UTR_variant
G/C 47375684 5_prime_UTR_premature_start_codon_gain_variant
G/A 47375785 synonymous_variant p.Gly14Gly
A/T 47376346 synonymous_variant p.Leu201Leu
G/T 47376487 synonymous_variant p.Ala248Ala
G/A 47376553 synonymous_variant p.Pro270Pro
G/T 47376563 missense_variant p.Val274Phe
T/C 47376603 missense_variant p.Met287Thr
G/A 47376607 synonymous_variant p.Glu288Glu
A/G 47376634 synonymous_variant p.Lys297Lys
C/T 47376640 synonymous_variant p.Phe299Phe
T/A 47376662 missense_variant p.Ser307Thr
G/C,T 47376688 synonymous_variant p.Ser315Ser
G/A 47376690 missense_variant p.Gly316Asp
C/T 47376691 synonymous_variant p.Gly316Gly
C/T 47376697 synonymous_variant p.Phe318Phe
A/T 47376713 missense_variant p.Thr324Ser
G/A 47376716 missense_variant p.Ala325Thr
C/T 47376730 synonymous_variant p.Thr329Thr
G/A 47376743 missense_variant p.Ala334Thr
G/A 47376745 synonymous_variant p.Ala334Ala
G/A 47376780 missense_variant p.Arg346Lys
G/A 47376796 synonymous_variant p.Thr351Thr
G/A 47376797 missense_variant p.Val352Met
C/T 47376817 synonymous_variant p.Phe358Phe
C/T 47376823 synonymous_variant p.Ile360Ile
G/A 47376826 synonymous_variant p.Arg361Arg
C/T 47376830 stop_gained p.Gln363*
C/T 47376840 missense_variant p.Ala366Val
C/T 47376860 missense_variant p.Leu373Phe
G/A 47376863 missense_variant p.Ala374Thr
G/A 47376865 synonymous_variant p.Ala374Ala
A/G 47376901 synonymous_variant p.Val386Val
G/C 47376979 synonymous_variant p.Ala412Ala
C/T 47377033 synonymous_variant p.Val430Val

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_10665.1
MEECQTVFGKYELGRLLGKGTFAKVYYGKQISTGESVAIKVMSKEQVRKEGMMEQIKREISVMRLVRHPNVVELKEVMATKTKIFFVMEYVRGGELFAKISKGKLKEDQARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDDDENLKISDFGLSALPEQLRYDGLLHTQCGTPAYVAPEVLRKKGYDGSKADIWSCGVVLYVLLAGFLPFQHENLMTMYNKVLRAEFDFPPWFSPESKRLISKILVADPAKRTSISAITRVPWFRKGLPLSSVADTCQVDKQETVMEEANNSKVPKFFNAFEFISSMSSGFDLSGLFETKRKTATVFTSKCSAVSIMAKIAAAARGLSFTVAEVKDFKIRLQGTAVGRKGRLAITAEVFEVAPEVAVVEFSKSSGDTLEYAKFCDEDVRPALKDIVWTWQGDATCAVNVPGCHGEECQKQVVSTV*


CDS Sequence:
>Vu_10665.1
ATGGAAGAGTGTCAGACGGTGTTCGGAAAATACGAGTTGGGGAGGCTTCTAGGGAAGGGGACGTTTGCCAAAGTGTATTATGGGAAGCAAATAAGCACGGGCGAGAGCGTGGCGATCAAAGTAATGAGCAAAGAGCAGGTGCGGAAAGAAGGAATGATGGAACAGATCAAACGCGAAATCTCTGTTATGCGTTTGGTGCGACATCCAAACGTTGTCGAACTCAAGGAGGTCATGGCCACGAAGACCAAAATCTTCTTCGTCATGGAATACGTCCGTGGCGGCGAACTCTTCGCCAAAATCTCCAAAGGAAAACTCAAAGAAGATCAGGCCCGCAAATATTTCCAGCAATTGATCAGCGCCGTCGATTACTGCCACAGCAGAGGGGTCTCCCACCGCGATCTCAAACCCGAGAATCTCCTCCTCGACGACGACGAAAACCTCAAAATCTCCGACTTCGGTCTGTCTGCGCTGCCCGAACAGCTTCGTTACGACGGACTCCTCCACACGCAGTGCGGGACCCCTGCCTACGTGGCGCCGGAAGTCTTGAGAAAAAAAGGATACGACGGTTCAAAAGCCGATATCTGGTCATGCGGCGTCGTTCTATACGTTCTTCTGGCTGGGTTTCTCCCCTTCCAACACGAGAATCTGATGACCATGTATAACAAAGTCCTGAGAGCAGAATTCGATTTCCCGCCCTGGTTTTCTCCCGAATCAAAGAGGTTGATCTCCAAGATTCTCGTGGCGGACCCTGCCAAGAGAACCTCCATTTCCGCCATCACGCGCGTCCCCTGGTTCCGCAAAGGCCTTCCGTTGTCCTCCGTCGCCGACACGTGTCAGGTCGACAAGCAGGAGACGGTCATGGAGGAGGCTAATAATTCCAAGGTTCCCAAATTCTTCAACGCCTTCGAGTTCATCTCCTCCATGTCATCGGGCTTTGATCTCTCGGGCCTGTTCGAGACCAAGCGGAAGACGGCCACGGTGTTCACCTCCAAGTGTTCCGCGGTGTCGATTATGGCCAAGATCGCCGCGGCGGCCAGGGGGCTGAGTTTCACGGTGGCCGAGGTGAAGGACTTCAAGATCCGGCTCCAGGGGACGGCCGTGGGAAGGAAGGGGCGGCTCGCGATCACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTAGCCGTGGTGGAGTTTTCGAAGTCCTCCGGCGATACCTTGGAATACGCGAAGTTTTGCGACGAGGACGTTAGGCCCGCGCTGAAGGACATTGTCTGGACGTGGCAAGGGGATGCCACGTGCGCTGTTAACGTCCCCGGCTGTCACGGTGAGGAGTGTCAAAAGCAGGTCGTTAGCACTGTATAA


Promoter Sequence:
>Vu_10665::LG2:47373282-47375282(+)
TAAAATTTATATTACGACATTAATATTCACCTTAAACTAATTAATAAATGAAACTATCAGTACCTTTAATAGTTTGAAATTAAAAAGTTTTATTACAATAAATAAAAAACAATATTACTTTAATGGTTTTAGATTAATTTTCAATCATATACATTGACTCATTAATTTAGCATAAAAAACCACAAATAAAATACAAAATTTACCCATCCTCAAAATTATCTAAAAAATATAATAATTACAGTTCCTTTAATAATTTTTTTCAAAGAATAACTAATAAAGATATTACTTTATTGTTTTGAATTCCAAAATATAAATATTATTGTTTCGAATTCCAAAATATATATTTTTTCAATAATGTCTTAAATATTTGAAAAATTAATTAATTAATGTAATTATCAACAAAATTTGTCAATAATTAACGAGATGTTTATCTATGAAAAACAATTATAGAAGAATATCGATAGTTACATGTGTAAGAAAAGTAGCAATGAGTATATTTGTCAATGTTTTTTCATGAATATATTCATTGACAAATATCGATATTTTCAGCAAATTCCTATATGTAAAATATAAACCTCAAATTTTAAGTGATGGAATATACTGGTTGTAATGCTTTGATAATATTTATTTTCATAAAAGTTAATTTCTTACAAACAAATATAAAAAGAAGTTGTAAAGCTGATAATCAACAGTAAATATAAAATTAAACAATTTTAATATTCCCAGTTTCCTATTGTAAAGTTTTACAAAATAGTTAAAAGTAATGCTGTTTTACAAATTTGAGAGAAATGACATGATAATCCCAACCATCGTATGATATACACTTTTTTCCTTAATAGTCAATTAAATTAAATTATTTATTTATTTTATATAAAATAAGGTAGATCTTGAGATATTTATATTGTTCACGATAGTATCAGTATTTTAAATTTGTTGTCTTTTGTGATTATTTTTCTTTTCATAGGTTTTTGTGACTGATTGAAGTTCTTCTCGCCACCTTTACCCCACCTCTAATCGGAATGCTTTTTAAGTAAAAGATTATAAATGGACACTTTAACTTTTTTTATCTTTATTAAACATTTAATAAAAGTCCTTTTTTATTTATTTTGTCTTTAAATATATTATTTTAAAATCAAAATGTAATCTTATGGAACTTAAATAGATATAAAGTAAAAAATTAAGTATACATACACTTTCAGCTTAGTTGAATCATTTATTCACCGAAAAATAAAATTAATTGGACCCTCTAGATTCTAAAATGTACTTAAGCCAAAAGAAAGTATGTATTATGACGCACGGAGTTGATGCGTCAACCTTGGAGGCCACGTTAAAATAAACAAATTGCAAAATAAAATAAAAGATAAAAATCTTAGCAATAAATTCTACTCCCAATATCAACAAGCAACTAAACCCTAACTCATTGAATTACAAGTAATGACCATCAAATCATGCCCAACCAAACATTTTTCAGTTCACCATGAATACTTTTAATAATAATAAAAGTCTGCCATTATTTTTTTAATATATACTTATATATTTATTAGACGAAGAAGGAAGGAGGAAAAATGTCAACAAATTTAGCAAAATAATCTCATTTAGTAGAAAGTCGTTGCTCAAATACCACAAAATTAATAAAAATAAAAACGCCTCACGATTAGTTGCTTCTATGAGAACCGCAAAACTTGCTCCTAACTTTCATGAGATTCACATCAAATAAATCATAAAAAAAATCAGCTATAAATGAGCTTTGTGGCCATAAAAAAATAGTCTATTTCTCTAGAAAAGTATAAAAAAAGTATTTTACCACTAGAGTTGATTGATTGAAAGAATTTAAACAATGTAAAGAAGATTTTAATGGCATTAAGATCTTAATGCCCTGGATTAGGAAAAAAAACAGTAAAGAGTAGTGGGAATTTGCAATTTGGAGAATAGATGTTAGGTGGTTAGTGGATGAGTGAACAAAAAGTATAAAAAGAGGAGATCTAGAACATGGGTTTTGT


Gene Sequence:
>Vu_10665(+)
TGTAGTGAGATGAAGAAGGAAATGGCACTTAACGCCAATAATGCAATATGGCCCATTTTGATATGGGTGAGGTTATGGGAGAGCCATACATTTATCTATCAAACTATGGGTTTTGGCAAGCCCCACAAAAAGTAAATACCAGCTTCTCCAATGGTTTCCACCCACACTTGCTTTTTATTTTTGTATTCCACACCCTAAAACCAGTTAACCATCACTCACTTATAAGTGCTTCTCTCCTCTAAACGTTTTTTTAACCTAAACAAACTTTATCAAAATCTTATTTCTTCCGTCAATTACGCTCCTCCCTCTCTCTTCTCTTCTTTCAGAGAACGGAAGAAATCAAATGGGGTTCCAGAATCCACCGCACATCACCTGAAAAGGAGGAAAAAAGTATGTTGGTGGGTGTGGTTTTGGAGTGATCATAATCATCATCATAATCATCATCATCATCAGTGATTGAGTATGGAAGAGTGTCAGACGGTGTTCGGAAAATACGAGTTGGGGAGGCTTCTAGGGAAGGGGACGTTTGCCAAAGTGTATTATGGGAAGCAAATAAGCACGGGCGAGAGCGTGGCGATCAAAGTAATGAGCAAAGAGCAGGTGCGGAAAGAAGGAATGATGGAACAGATCAAACGCGAAATCTCTGTTATGCGTTTGGTGCGACATCCAAACGTTGTCGAACTCAAGGAGGTCATGGCCACGAAGACCAAAATCTTCTTCGTCATGGAATACGTCCGTGGCGGCGAACTCTTCGCCAAAATCTCCAAAGGAAAACTCAAAGAAGATCAGGCCCGCAAATATTTCCAGCAATTGATCAGCGCCGTCGATTACTGCCACAGCAGAGGGGTCTCCCACCGCGATCTCAAACCCGAGAATCTCCTCCTCGACGACGACGAAAACCTCAAAATCTCCGACTTCGGTCTGTCTGCGCTGCCCGAACAGCTTCGTTACGACGGACTCCTCCACACGCAGTGCGGGACCCCTGCCTACGTGGCGCCGGAAGTCTTGAGAAAAAAAGGATACGACGGTTCAAAAGCCGATATCTGGTCATGCGGCGTCGTTCTATACGTTCTTCTGGCTGGGTTTCTCCCCTTCCAACACGAGAATCTGATGACCATGTATAACAAAGTCCTGAGAGCAGAATTCGATTTCCCGCCCTGGTTTTCTCCCGAATCAAAGAGGTTGATCTCCAAGATTCTCGTGGCGGACCCTGCCAAGAGAACCTCCATTTCCGCCATCACGCGCGTCCCCTGGTTCCGCAAAGGCCTTCCGTTGTCCTCCGTCGCCGACACGTGTCAGGTCGACAAGCAGGAGACGGTCATGGAGGAGGCTAATAATTCCAAGGTTCCCAAATTCTTCAACGCCTTCGAGTTCATCTCCTCCATGTCATCGGGCTTTGATCTCTCGGGCCTGTTCGAGACCAAGCGGAAGACGGCCACGGTGTTCACCTCCAAGTGTTCCGCGGTGTCGATTATGGCCAAGATCGCCGCGGCGGCCAGGGGGCTGAGTTTCACGGTGGCCGAGGTGAAGGACTTCAAGATCCGGCTCCAGGGGACGGCCGTGGGAAGGAAGGGGCGGCTCGCGATCACGGCGGAGGTGTTCGAGGTGGCGCCGGAGGTAGCCGTGGTGGAGTTTTCGAAGTCCTCCGGCGATACCTTGGAATACGCGAAGTTTTGCGACGAGGACGTTAGGCCCGCGCTGAAGGACATTGTCTGGACGTGGCAAGGGGATGCCACGTGCGCTGTTAACGTCCCCGGCTGTCACGGTGAGGAGTGTCAAAAGCAGGTCGTTAGCACTGTATAATTAAATTAGTTAATTATAATTAGTGTGGCAGATAGATACTGTGACACGTTCTAACTAATTTTGTTCTGCTTTGGCTTTGAGTTTGTCGCCTTTCGTCTTTATTCCCTGCCTAATTTTTAGAACGTAGGGTTTTGCACCTTTTCAAAGTGAGACTGTATATAAATTGTAAAATTGTAATTATGATGGTGCTGTTACTTTCGGAATATGGAAGCCATTACCGTCTCCCT