Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11020 LG2 50473761 50475314 PREDICTED: mitogen-activated protein kinase homolog 1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   auxin-activated signaling pathway, signal transduction, protein phosphorylation, auxin-activated signaling pathway, intracellular signal transduction, auxin-activated signaling pathway, protein phosphorylation, protein phosphorylation, auxin-activated signaling pathway
Cellular Component   is active in   cytoplasm, nucleus
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein binding, protein kinase activity, MAP kinase activity, protein binding, protein kinase activity, protein binding, MAP kinase activity, protein binding, MAP kinase activity, kinase activity, MAP kinase activity, protein binding, protein serine/threonine kinase activity, protein kinase activity, MAP kinase activity, protein serine/threonine kinase activity, protein binding, MAP kinase activity, protein binding, protein binding
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
C/T 50474280 upstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11020.1
MATPVDPPNGIKNEGKHYFSMWQALFEIDSKYVPIKPIGRGAYGIVCSSVNKETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPVQRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARINCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKKYIKSLPSSPGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPYMAPLYDPNCDPPAVIPIDLDIDEDLGEEMIREMMWKEMLHYHPEAAVESAGLC*


CDS Sequence:
>Vu_11020.1
ATGGCTACTCCTGTTGATCCTCCTAATGGAATCAAGAATGAAGGGAAGCATTATTTCTCCATGTGGCAAGCGCTGTTCGAGATTGATTCAAAATACGTGCCAATCAAGCCCATTGGTCGCGGTGCATACGGGATCGTCTGCTCTTCTGTGAATAAAGAGACCAATGAGAAGGTTGCCATAAAAAAAATACAAAATGCCTTTGAGAACCGGGTTGATGCTTTGAGAACTTTGCGCGAACTCAAGCTTCTTCGCCACCTTCACCATGAGAATGTAATTGCTTTGAAGGACATCATGATGCCTGTTCAGAGGAATAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCACCAGATTATTAAGTCTTCTCAAGCACTGTCTAATGATCACTGCCAGTATTTCCTCTTTCAGTTGCTACGAGGCTTGAAATATCTTCATTCCGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTGATCAACGCAAATTGTGACCTAAAAATATGTGATTTCGGGTTAGCAAGAATTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTGACAAGGTGGTATAGGGCACCAGAGCTCCTACTCTGCTGCGACAACTACGGAACATCAATTGATGTTTGGTCGGTTGGATGCATCTTTGCTGAGCTTCTTGGTCGAAAACCGATTTTCCCTGGTTCAGAGTGTCTCAACCAGCTGAAATTGATCATCAATATCCTTGGTAGTCAAAGGGAGGAGGACATCGAGTTCATCGATAATCCAAAGGCAAAGAAGTATATCAAATCACTTCCTTCTTCTCCTGGAACCCCCTTTTCGCGACTTTATCCTAATGCACATCCTTTGGCAATTGATCTTCTGGCAAAGATGCTTGTTTTCGATCCAACAAAGAGGATCAGTGTCACTGAAGCGCTTCAACACCCTTACATGGCCCCTCTTTACGATCCTAACTGTGACCCCCCAGCTGTGATTCCAATTGATCTTGACATTGATGAGGATCTGGGGGAAGAGATGATAAGGGAGATGATGTGGAAAGAAATGCTTCATTACCATCCTGAAGCTGCTGTAGAGAGTGCAGGGCTGTGCTGA


Promoter Sequence:
>Vu_11020::LG2:50471761-50473761(+)
CCTGATTTTTTTCCGTAATCAATAATCAATAAATGACACAAAGCACAACAACTACCATATCCTGCGGGAACATGCAGTCCCAGAAACATATGTTTGGAAATTTTTGGAATAAATTCTCGAGAAATGTGAAAAGAAAATGATGATAAATGACATAATGAATGAAATACCTACAAAAACAGGCGGAGCGTCTCCCTCGAAATCCTCTTTCCAGAACTTGACTTTTCGGAAAAATGTCTCGGCGCTTCCTTTTTGAGCTTCACCACGATCTGCATTCATTTAATTAAACAAAAAATAAAGAGAGATGAAACCCTAGCGATAAGGTGCAGGGTTGGTGAAATTTTGTTGGCAATCACTCCCCGTCGGATAGAAAAATTGAATTTGAAATTCTTGTAATGAAAATGGATTATCATGGAAACCGAAGGGAGAATGAGAAAATAAAGCACTCACAGTCGCGGTAGACGATGTTGTCGCCTCTCTGGGAAAGCACGAAAAACTGCAATATCATCTTTGCCTTCTTCTTCTTCAGTTTTCTCTGTCTTCAACTCACTCAACTCATGTCCTCCTTCTTTACTTTGTCCACGCTTACGACAAACGACATTGCCGTTTTGCCACGCACGAGCCAGGCCCAGAAGGTGGCAGCATCATTTGACTCGTGTCGTTTTATTATTTTCACTTTTTTTTCTATTAAATAATTTTTTGTTATTATTATTATTATACATTTAACGTAACCTTACAGTTGTGTTTATCAAAATATTATAATCTTTAACAAGGATATTTTTCTTGAGTTTTGAAAATTTATATTTGTTTTATCCATTGTAAAGATAAAGATTTTAGTTTAATTTATTTATTTCAGTTTTTAGATAAAGATTGTATCTTTAATTTCAAAATTTTAATTGTAGATTTTCTTAGATTATAGAATAGATGAGATTTATTATCTGTAACAACTTATATTAAGATCATATGAAAAACGTGTAGAAATTATCTTAAAAACACTTTGGAGGGGCTTTTTCAAATAAAAACTGTCACGCTAACGTTGTCTCCACGCTAAGCATTCGGTAATAACCAGGTAAATCTTTAATGATGATGTAGTGCACCAATCAAATAAGTAAATTTTAATTAATAACTTTATTTAGTAGCAATTAAATTATAAATAGGATTTTCAAAGCATAAAAATCAAGTGGCGGAATCCAACAAACTAAATACAATATAATTATGAATTTATTTTGTAAAAAAGAAATGGTGTAGCCAAAAAGGAGTATCACGCAAAAAGATGATGCAAGAAAGAAAGAAGGAAAAAATGAGAAGGTAGTGCTAGGTGCGAGTACTGGAGCGAAAGGCGGATGTGTGACTCTCGTTAGGGAAAGAGAGAGAGAGAGATGCAGTTCCATTCAGAAACTCCAAACATCTGAGGCGACAACCTTAGGAATCTCGATCGCTGATAAAACCTATGCAGCCCCCAACACAGTCTGCATTCCAACTTGTTTAAATTCTCTTTTTTTCCGATTCACCCTTCTCTCAATAAATTTTGGGCCTATGAGACCCGATTCTTCGCCACCGTCACTGTGGTAATAAAGGTTTTTTTTTTCAAATAAAAGGTAACCTTTTTCTCTTACGTTTTTTCTACATTTGTAAATAAACTTGTTTTCTTTCTCTTTCTCTTTTTGTTAATTAATAATTACTCTTGAGTGTGTTTCTGTGTTTGAACCTGAAATTCTCCACATGACGTTCTATTTGGTACAGATCTCTGCATGTTCTCAACTTGAGATTAATTAAATGAAAATTTGATACGGATCTAGGTTCTTAGTTTGGTAGGTTAGTCATAAAGCTTTCAAGAGTCTCTTAATTAATTGTGTTTGGGGGGAAATTATTATAATGATACACCAACAACAACTTACCCCACTGTATGTTTATGATTCTGTACACTTACCAGTCAATAGTGAACACTGAAAGTTTCCGAATTGTGATGATTGGTTGAAACCATCGGTTTGATTTGTAGAAAA


Gene Sequence:
>Vu_11020(+)
ATGGCTACTCCTGTTGATCCTCCTAATGGAATCAAGAATGAAGGGAAGCATTATTTCTCCATGTGGCAAGCGCTGTTCGAGATTGATTCAAAATACGTGCCAATCAAGCCCATTGGTCGCGGTGCATACGGGATCGTCTGCTCTTCTGTGAATAAAGAGACCAATGAGAAGGTTGCCATAAAAAAAATACAAAATGCCTTTGAGAACCGGGTTGATGCTTTGAGAACTTTGCGCGAACTCAAGCTTCTTCGCCACCTTCACCATGAGAATGTAATTGCTTTGAAGGACATCATGATGCCTGTTCAGAGGAATAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCACCAGATTATTAAGTCTTCTCAAGCACTGTCTAATGATCACTGCCAGTATTTCCTCTTTCAGGTTTGAACCTTTGGCTCATTGTTGGTGCAATTCCATAATATTTTCTTGTTTTCTTTGTCAATTTTGATATCATAAAGCACACGGTTTTCAATGCCCCACTGCCAACTGTTTGTGAATGTTTAGTATTGTAGAGTTGACACGGAGCACAAAGCAGGCGTGTTAAACTTGTTCTTATGTTTGTGACAATCTTTTACAGGGATTTTGGTACAAGGTTGTGCATAATTACAAAGTTGTGTGTTCTTGTAATTTTGAAACAGTTAGTTTTTCTTGATTGTGTCGCGTTTTACCCCTTTGCATGTTAAATTCCCCCTTGATCTTCTAGACCTGTAGTTCTTCCTGAATAACTGACATCAATCATGTTGTGGCACATTTATAGGGTTTTTTTTTGTGTTGCTTAGCTGGTGCTTGAATGCACTGATTGAATGTTCTCATCTGCAGTTGCTACGAGGCTTGAAATATCTTCATTCCGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTGATCAACGCAAATTGTGACCTAAAAATATGTGATTTCGGGTTAGCAAGAATTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTGACAAGGTGGTATAGGGCACCAGAGCTCCTACTCTGCTGCGACAACTACGGAACATCAATTGATGTTTGGTCGGTTGGATGCATCTTTGCTGAGCTTCTTGGTCGAAAACCGATTTTCCCTGGTTCAGAGTGTCTCAACCAGCTGAAATTGATCATCAATATCCTTGGTAGTCAAAGGGAGGAGGACATCGAGTTCATCGATAATCCAAAGGCAAAGAAGTATATCAAATCACTTCCTTCTTCTCCTGGAACCCCCTTTTCGCGACTTTATCCTAATGCACATCCTTTGGCAATTGATCTTCTGGCAAAGATGCTTGTTTTCGATCCAACAAAGAGGATCAGTGTCACTGAAGCGCTTCAACACCCTTACATGGCCCCTCTTTACGATCCTAACTGTGACCCCCCAGCTGTGATTCCAATTGATCTTGACATTGATGAGGATCTGGGGGAAGAGATGATAAGGGAGATGATGTGGAAAGAAATGCTTCATTACCATCCTGAAGCTGCTGTAGAGAGTGCAGGGCTGTGCTGA