Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11273 LG2 52640068 52640954 PREDICTED: myb-related protein 308-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to abscisic acid, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, abscisic acid-activated signaling pathway, response to abscisic acid, abscisic acid-activated signaling pathway
Cellular Component   located in   nucleus
Molecular Function   enables   cis-regulatory region sequence-specific DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, protein binding, transcription cis-regulatory region binding, cis-regulatory region sequence-specific DNA binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 52640131 missense_variant p.Leu153Pro
A/T 52640158 missense_variant p.Leu144Gln
G/A 52640317 missense_variant p.Pro91Leu
T/G 52640369 missense_variant p.Thr74Pro
G/A 52640635 intron_variant
T/C 52640668 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11273.1
MGRWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLNDSPRHNQLQESAGAATISFAPKQEEKDNNVSVEVKDSKSPTSERCPDLNLELSISPPHHEREEGGDEEESKSIARSLCFACSLGLQNSKDCSCALNAITANANASTATGYDFLGLKTNPLDYRTLQMK*


CDS Sequence:
>Vu_11273.1
ATGGGAAGGTGGTCTCTCATAGCCGGAAGATTGCCGGGGAGAACGGACAATGAGATAAAGAATTACTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCACAGGCCTCTCAACGACTCTCCTCGTCACAATCAACTCCAAGAATCAGCCGGCGCAGCCACCATATCTTTTGCTCCCAAACAAGAGGAAAAGGACAACAACGTGTCGGTTGAGGTTAAGGATTCGAAGAGTCCCACATCGGAACGCTGCCCCGACTTGAACCTCGAGCTAAGCATCAGTCCTCCCCATCACGAACGGGAGGAGGGCGGCGATGAAGAGGAATCGAAGAGTATTGCGAGAAGCCTTTGCTTTGCCTGCAGTTTGGGTTTGCAAAACAGCAAAGACTGTAGCTGTGCCCTCAATGCCATCACTGCAAATGCCAACGCTTCTACTGCCACTGGCTACGATTTCTTGGGCTTGAAAACCAACCCTTTGGATTACAGAACCTTGCAAATGAAATGA


Promoter Sequence:
>Vu_11273::LG2:52640954-52642954(-)
TTATTTTTTTATCTGAAATGCCATCAGTTGTTAGCTGTTGGTTTTAAATGAAGAAACCTAAGATTCAGACCACACTGTATTTATTTTGATCGATCCATATGTACGAATCAATTTATTGATTCGGTTTGATCTTCCTCTTTTATATTTTTGAGTTTGGTGCAGACCAACCAGTGCCCCTGTGCAAATGAATGTGTATTGAAAAAAGGTAGTTGGATTTTGTAAAGTGTGTGCAGCTTCATTATTTTGTTACCAACCTGTAATAGAAAGGAGAACAGGATTAAAGTTGAGTCTACATAGAGAAAGAGGTTTGTCACATAAACATAAATCATATAAAAAATTATACTAATCTCTACCCAAAATACTAAGAAAATAGATTAATAAATCTTTTATTTTTATATCATGTTTTACTTTCTTATTTCATCGAATATAAAATTTAAACTCATACTTAAATTTTTAATAACTAGAATTGAAATGAGTGCGAGTTAGAGACGAAAAAAGTGAATAATATAATTATAAATAATAAATTAAATAATAATTTGGCAAGATTGAAACGAACTTTTACTTACAGTACTAACTCTTCAGCATCTACTTGCAATGATAGAATAAAAATTATTTGATACACTTAAATATTTTACATTTATTTGACACTATTCTTACCAACTTTTTATTCTCTTATCTCTTAAAATAATGCAAAAATTTATATTTTTTTATTATTTTATCTTTATAGCCTTTGTCAAATAAATATAAAAGTGTATCATGATAATTATATTCACCGAATAAAAGAATTTTCAAAGCGAATATTAAATATTGGAAGAGAAAGGATAAAATTAGGGATTTGGTTGGCAATAGCGAAACTTGGAGCAGAAGGTTGGGGCAAAGAAAAAAGGGAAAGTGGAAGGTGAAGCAAAGGCCATATACAACCACTACCATACATTCTATCATTTTATCTTTCTCTTTTCTTCTCTTTCATCAATCAATTATCATCATCATCATCCTTCAACCCAACTTCCAACTCTTCTAGAAACCCGTCACTGTCACACATACTCACTATCTCTCTCTCTCTCTCATGCATGATAATGCACCAAACCAATATAATAAAGAACAGCAACTACCATTACCATCTCTATGCTTTCACACATGAATAGCCAAACTACCGATACATTTCTTTCCAGGAAGCTCACAACAACCAACTTACTTAAATCACTCTTTTTTCTTTTTCTTTTTCTTTTTCTTTTTAACAATATCCAATATCTCACTTCCACCCCCCAATAATACCATTTTCATTATTTTTTAGGATGGCAAATGCATATTAAACATTTATGTTATTATTATAACTCTATTTTCATTCGACAGGGTTGACTATATGGATGGTTACACACGATCGACATCTATTTTAATAAATTATTTGGGTGCTTGGTTCGTGAAACGAGGATAACAGAGGAAAATATGAAAATAAGTTATAATATTTTATAAAAGAAAAATAGAAAAAATCTTGCAAATGATGCATATAATTTAAAGTGATTAAATGCGGAAGCAGCATAGTCCTTACGGTAATAGCAACAGCATCACATGTTAGGAGGGCATTATTGAAAAAGGAATTGTTTTTTTTTATGTAGAGAAAAAGGAAAAGGATATAAAATGATGTATTATTTATTAGTTTATGCAAAAAGGGGGAAAGTTCACATCTTCTTGTCTTGCCTTGGCCCTCCTAACCCATAGCTAATGTCTTTTGAGGCTAAGATGATTATAATAATATATGAAATTATGGTATATTATAGTACTAACAATATATATCATGTAATGAAACGAATTCAAAGAGAGGGAAAGGTACCAGCCACTCTCCTCTAACCTATCTCACCAACTCACGTCTAGAAGCACCAATATCAGTAATCGCTTTTTCTCTTGAGTCAAAAGCCTATAAAAATCATCTCTCAGGGCCGGCCACCCTTATTGTTCAACCAAAACCACCACACCTCAGCCACCAATACAACAATCGTTCC


Gene Sequence:
>Vu_11273(-)
ATGGGAAGGTCTCCTTGTTGTGAGAAAGCACACACCAACAAAGGAGCATGGACCAAAGAAGAAGACGATCGCCTCATAGCTTACATCAGAGCTCACGGTGAAGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGTCTCCGCTGGATCAACTACCTCCGCCCTGACCTCAAACGCGGGAATTTCACGGAAGAAGAAGATGAGCTCATCATCAAACTCCACAGCCTCCTCGGGAACAAGTAAGATATAATCCAAATAAATAATAATAATAATAATAATAATAATAATAAACACCCCGATTATTACCGTTTCTTGGTTTATTCACGAGATGGGTCCAAATTATATATAGGTGGTCTCTCATAGCCGGAAGATTGCCGGGGAGAACGGACAATGAGATAAAGAATTACTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCACAGGCCTCTCAACGACTCTCCTCGTCACAATCAACTCCAAGAATCAGCCGGCGCAGCCACCATATCTTTTGCTCCCAAACAAGAGGAAAAGGACAACAACGTGTCGGTTGAGGTTAAGGATTCGAAGAGTCCCACATCGGAACGCTGCCCCGACTTGAACCTCGAGCTAAGCATCAGTCCTCCCCATCACGAACGGGAGGAGGGCGGCGATGAAGAGGAATCGAAGAGTATTGCGAGAAGCCTTTGCTTTGCCTGCAGTTTGGGTTTGCAAAACAGCAAAGACTGTAGCTGTGCCCTCAATGCCATCACTGCAAATGCCAACGCTTCTACTGCCACTGGCTACGATTTCTTGGGCTTGAAAACCAACCCTTTGGATTACAGAACCTTGCAAATGAAATGA