Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_11511 LG3 1947548 1951942 PREDICTED: BES1/BZR1 homolog protein 4
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   brassinosteroid mediated signaling pathway, transcription, DNA-templated, transcription, DNA-templated, transcription, DNA-templated, regulation of transcription, DNA-templated, brassinosteroid mediated signaling pathway, regulation of transcription, DNA-templated, brassinosteroid mediated signaling pathway, transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, brassinosteroid mediated signaling pathway
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/A 1947779 3_prime_UTR_variant
C/A 1948451 stop_gained p.Glu183*
T/A 1948456 missense_variant p.Glu181Val
G/A 1948461 synonymous_variant p.Asn179Asn
A/T 1948879 intron_variant
G/A,C 1948913 intron_variant
C/T 1948927 intron_variant
A/C 1948978 intron_variant
T/G 1949007 intron_variant
T/A 1949023 intron_variant
C/T 1949032 intron_variant
C/T 1949082 intron_variant
C/T 1949084 intron_variant
C/T 1949137 intron_variant
G/A,* 1949362 intron_variant
A/G,* 1949366 intron_variant
C/G,* 1949379 intron_variant
C/T 1949384 intron_variant
A/C,G 1949411 intron_variant
T/C 1949420 intron_variant
T/C 1949453 intron_variant
T/C 1949455 intron_variant
A/T 1949512 intron_variant
C/T 1949548 intron_variant
G/C 1949555 intron_variant
A/G 1949583 intron_variant
T/A 1949644 intron_variant
G/A 1949662 intron_variant
G/A 1949702 intron_variant
T/G 1949717 intron_variant
C/T 1949727 intron_variant
A/G 1949779 intron_variant
A/T 1949800 intron_variant
G/A 1949856 intron_variant
T/C 1949858 intron_variant
A/T 1949864 intron_variant
A/T 1949980 intron_variant
G/C 1950084 intron_variant
G/T 1950118 intron_variant
T/A 1950169 intron_variant
T/A 1950176 intron_variant
A/T 1950178 intron_variant
C/T 1950183 intron_variant
A/G 1950190 intron_variant
C/G 1950231 intron_variant
T/C 1950395 intron_variant
G/C,* 1950448 intron_variant
T/C 1950526 intron_variant
C/A 1950620 intron_variant
C/A 1950741 intron_variant
A/T 1950793 intron_variant
A/G 1950846 intron_variant
A/G,T 1951061 intron_variant
G/T 1951076 intron_variant
A/T 1951116 intron_variant
G/A 1951205 synonymous_variant p.Asp47Asp
T/A 1951206 missense_variant p.Asp47Val
A/C 1951358 5_prime_UTR_premature_start_codon_gain_variant
C/T 1951391 5_prime_UTR_variant
G/C 1951488 5_prime_UTR_variant
C/A 1951586 5_prime_UTR_variant
T/A 1951942 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_11511.1
MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPCSSYHPSPCASYNPSPGSSSFPSPSSSPYTNIPNADGNSLIPWLKNLSTASSSASSPKLPHLYLHSGSISAPVTPPLSSPTARTPRINAEWEDQSVRPGWTRQQHYSFLPSSSPPSPGRQVVDPEWFAGIKLPHVNPTSPTFSLISSNPFAFKEDGLAGSGSRMWTPAHSGTCSPAVAPGTDNNADIPMSEAVSDEFAFGSNMLGLVKPWEGERIHEEFGSDDLELTLGNSKTR*


CDS Sequence:
>Vu_11511.1
ATGACGTCGGGGACGAGACTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGAAGAGAGAGAAGAAGAAGAGCCATAGCAGCGAAGATCTTCGCAGGTCTGCGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAAGCAGGTTGGACCGTTGAACCAGATGGAACCACTTACCGCAAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCAAGTCCTTGCTCATCCTACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCAGGCTCATCTTCCTTCCCAAGTCCATCTTCATCTCCATACACCAACATTCCTAATGCTGATGGCAATTCTCTCATTCCATGGCTCAAAAACCTCTCAACTGCTTCATCTTCTGCATCGTCTCCAAAACTTCCCCATCTCTACCTCCACAGTGGCTCCATCAGTGCTCCTGTCACACCTCCTCTGAGCTCTCCAACAGCCAGAACACCACGAATCAACGCCGAGTGGGAGGATCAGTCTGTGCGGCCGGGGTGGACCAGACAGCAGCACTACTCATTCCTGCCATCTTCTAGTCCTCCGAGTCCCGGGCGCCAAGTTGTTGACCCCGAATGGTTTGCTGGGATCAAACTTCCTCATGTTAATCCAACCTCACCAACGTTTAGCTTGATCTCCTCAAACCCTTTTGCCTTCAAGGAAGATGGTTTGGCCGGCAGTGGTTCAAGAATGTGGACTCCTGCTCACAGTGGAACATGCTCTCCTGCTGTTGCACCAGGAACTGATAACAATGCTGACATTCCAATGTCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGCTGGGGCTTGTGAAGCCATGGGAAGGAGAAAGGATTCATGAGGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGATGA


Promoter Sequence:
>Vu_11511::LG3:1951942-1953942(-)
TTTAGTTCCTCTTGTGTGATTGATTCTCTGAAAAGAAAGATCCCAAAATTGTTTCTTCTTGTACTTTTCAATTTTAATTAATTTTTTCTTAAATCAAATTCAATCCAAATATTTATTTTTTATTTATAATAAAATTATTTGAAAAATTCAAATTAGCTAGTATCTATGAAAATGATACTCATTTTCACTTTTTAAAACTTATTTTTAAAAATTAATTTTCAGTAAATGTAATGAAAAACATTGTCTTACCAACTTATGGAAACATTTTCTTAAATGTAATGAAAAACATCATTATAACGAATTATCATACTAGACAAATGCTAAAAAGTACTTTTCATTAAAATGCATAAAGTATTCTTCCCTCTAATTCTTTAATACTTGCTCTATATGGTCTTGAATTAAAAAGTTATTTTAATATTTATTTATGAGCAAGAGTTATTTAAATTTCTTGAGGAGCGTTTCTAGGAAACATTTTGACTTCACACTAATCATAGTAAGAAATCCGAAACCCATCAACCTAAATGTGTATGCTTATAGATTCATTCAACACAAACTAATGCCATAAGGAAGAAAAACATTTTCCTTCTTAAGTCAAATCCTCATTAACATTGTTGTTTTTTTCTTGATTGTGTTGGTTTATATCTAAACCAAACACACCCATACAGTGATCATTATAACCTATCTTTTCATTGGTGTGACATTGAATCTATCCTTAACCAAAGCTCTATCCTTAGCCCCATCTTTTCAGTATCATAATTGACTTCTACATTTCAAAACAAACATGAAAAAAAGTTATTTTAGCTGCAAAAAACTGCCTATTATTTTCTTTTGAATATTTTCTTCAGATATTTGTTTCTTTTTTTTAGTGGAAATTGGGTCTTATTTGTGGTAGTATATGCCATGAGTGTTGTTCTCCAAACACTAATTAAAGGCAGCATGGTTGGTGGGAAAGAAGACATGTAAAAGGAACTTGGTCCATGTCCTTAAAAGATTCATTTTTTGGCAGCACCGAATTACCCCTTTTTCCATCCAAATTTGACACTTGAAAGATAAAGTTCATGTAACTCTTTCATCTCTTCAACTTTCTATTTTCTTATAGAAAAACTTTATCCATCAAGAGTATTAAATAATCCCTTTCTTTTCTTCCTTTATATACATATAATTGGAAGTTTCACGTTAATCAGAGACTATATCATTTATAATATATAAATAAATACAAATTTTATATCATAAGTTAGTTTTGTAAAATTAAATTAAATTTAAATTTTATTTTTTAATGTGGTATCATACTCAAATAAGAGTTAATTCACTTCTTAACGCGTTATATTTAACATATAAATTTTATTTGTTAATTGAATTACATATTTAAAGTTATCATAAAATTAAGAAGAAGATGGGAGAAATGGAAATGAATTTTACAGTTGATGATAGAAGCAGTGAACAATGTAGGGAAAAAGGTTGCATTAATTGAAGGCAATTTCTGAACTTTCATTAATAAAACCCACATGGCTATGGCAAAAAAGGTAGGTTAAAATCATGCTCCACACTTGTATGTTTTTTGGAGTTAACTTTTGAAGGCACCAAACAAAAATAAAAGTTAGCACTGCTTTCACTGTTACTAACTCACTTTTATCAAACCCCATATCATGCCGTTTGAGAAACAATTTCATTTTCATGCATCGCTCCTTTTACTTTATCATCTTTTTTTCTATTTCACATTTTCTTATTTAATAAATTCAAATATAGATAAATATACTCAACGCATCATTAACTATTTTCAAATTGGAGATTAAACTCTCTATATACTTAGTGTTATATTCTTAGTATTGTGTCGCCAAAATTATATTGATTTGATGCATATGAGGAGGGTTGAATATGTCAAGTTAAGTTTTGGGTTTGAATATTGTAATTTATAAATATGATTAGAATATTTTTGTATTAAAAAAAACAGAGAGAAAAGGAAAATTAACAAATCCAATGACATTCAACTGAAAGTAACC


Gene Sequence:
>Vu_11511(-)
AACTTAGCTAAATTCAGAAAAGAATAGAGAGAGAGAAAAAGGAAAACCAAATCAAAGTCATCATAGAGTCTCTCTACCCAAAACAAAATCCATTGCAGTGTGAAGTTCTTCTCAGAAGTTCACAAAGAAAGAAAGGGAGAGAAAGTGAGGGAAAAAGGTTAGGCCAGTGGTGGATCTAAAATCTCCAACACAACTTTCTCTCTCTATTTTCTCTGTTTCTCTCTCTATACAAAAAATCCAAACACCATGATCATCAATTTGATCCGCAAATTTGGCTAATCAAGTGCCCCTCTTCACTCTTTTCTTTTTCATCTTCTTCTTCTCCTTTTTTCATATGCAAACTTAAACACAAACACGCTCATTTTTTCCGACCACTTTCTAAGTCAGATCTCCTCCGATCTCCGATCACTCTCCGGCCACAAACCCACATCCTAAATCCACCAAATGTGCTACCCTTGCCACTTCCACCACACCCTTGTCCCTGCTTGGTTCGATTTCCAGTGACAGACCCAGAAGGGGTTTTAACGTTGTTGGGTCGAATCTGGTCCAAAGTTGTGTTCTTTGAGAGGTTTGAAGAGGACCCTTTTGAGTTGGGAGATGACGTCGGGGACGAGACTACCCACGTGGAAGGAGAGAGAGAACAACAAGAGAAGAGAGAGAAGAAGAAGAGCCATAGCAGCGAAGATCTTCGCAGGTCTGCGGATGTATGGAAACTTCAAACTCCCCAAACACTGCGACAACAACGAAGTCCTCAAAGCCCTTTGCAACGAAGCAGGTTGGACCGTTGAACCAGATGGAACCACTTACCGCAAGGTACCAAATTTCCTGCATTCAATTTTTCTCTTTCTATTTTCTATACCAATTATCTATTTCTTTTCTTATCACCATTTTAGCTACTTTTGATTTTAGTATTTCTGTGTCAAAAACATTTTTTTGTTTATTTTTTACCCTGGCTTAAGCCTTTTCCCAGAAATGGGAAACTGTTTATCTTGTTCTTCTCCTTTTCATGGTGTGAAATAAATGTATAGTTTGAGGTAGATTAACGCGTTCTCTTGAATCTCTCTCTTGAGAGTTTGACAATTATTTAAAGGACATTTATTTATAAATATAAAGTTTAGTATGACTTGTTTGACAAAATTAAATATTACTTGGGACTTTTTTTCTTTTATTTTCATTATCTGATAAACATTAATTTGTTTAAGAATTTTTTTTATATATGTAATGGCAATTAATTATTTTAACAATTGGGTTACACTTGTTTGGAAGAAGATGAGATCTTAGACATGATGGATCATCAATAGCAAGTTTGACTTCCTTTGGAGGCTGAAAACTTTATCTATTTTAGGCTGTAAAATTTTTTCTTAATTTTTATATAAGAAAATTTCAACCATTGTTGTCACTGTTCATACACCCACCATAAGCATTATATTCATTTTTTTTTCCACCACATTTTTTTCTAATTACATAACTTTTAATACACAAAAATCTCTCTCTCTTTTTTTTTTTCTATCTACACACTCCATCTTGCATTTTCAAACAAGGTGTACATCGACTTGTTATATTTGAAGTTAGACACTTATTCTTCATTTAACCCCTCATAGACTAATACTTTTCATGTCTTCTTTTGTTACATTCTTTATTATTTTCTCTTCTTTTTGTTTTTCCTAGTTATAAATGTTGTTATAGTATATAAACATCATTTGTGGAGAAAGCTTAATTATAAGATGAAATTGAAAAGGTTCATGATGTAATTATAAAAGCATGTGACATGTGAGATGTCTAAATAACTGATATAATTTAAATTGTGTGGCATAAGATTTATTTCTCCAATTATATATTAAAATTCTTTGGCTGTGTACGGTGGATCCGGTGAGCAGTGGTCCTGGCATTGTTAATGGGAAAGCATCAAAGATTCGCTCTCTTTCTTGACTGATGGTCACCTGAGAAACCAGGACAATTTTTTGTTTTTTAGTCATTTACATCTTTACGGGACCAAAATGCCCTCACTGGTAGATGCTTCAATAATTGTATGAAGTGAACCTGTTAAAGGGGTATTTTGGTAAACTCAAAAAGGCAATTTTGCCAGCTTTGGTGTTCCGTGGTTGGTGTGTTTGTCTGATATTTTGCTTTGTGTAATGTCCGTGTTGCTGTGTGGCATCGTAGTATTAGCTTTTTGACTTTTTCAGACAGCGTGGCCACGTAGGATTCCATTTGGGACTGTCTTTAGCCTCATCATTCACCCTTCTTTTGTGTCAATGTCACTGTTCTTTCTTTTTCTTTCCCCTCTTTCAGACAAACATGTTCAGATCTATGCATGCTTATAATCAGTCTAATATATTATATGGTATTAGATCATCACTGATAATAACTATATTTGCTATATTTCACTTTTTAGAGTGAGTTCTTTTTCTGTCATAAAATTTGAAAACATTCACTGATTAGTTTAGCACACTGTCTAATATTTGTGTGCATGCAATACAATCACCTATAATAATACAAAATTTCTTCATCTCATAAATCACATTTGGTGCTGGTGACTTTCACCTTTTCTTGCATAAGCTTGGAATAGGTTGATATTGACATTCATATTTTCTTCTGCACACTCAATTCTTTGACCAATTATGTCATTGATTAGACTGGATAATAATGCAGAGTTGAATAACTGATATATAGTTTTACATCTTTACATATATGTAATATCCCTTCCATCAAACAGTTTTTTTATTGATTGAATTTCATGGGAGTTCCAACAATTTAGAAGTAAATTCCATCTTATGAAAAATGAAACCAGCATGAATTCAGAGTGTATGTGCATAAACCTATTCATGAGTACTTGGAGGAAAGAAAAATAACAAAGGGAGTTAAACTAACTTCTCCTTAAAGTATAACTAGCTTATGAATGAGTTAATTGATAAACGTAATGTTGTATCAGCTTATCAGAAATCTGGTTTTTCTTGAAAATGTTTATGGAATAGTTTTCTCAAAATAAATTCGTAGTCAACACCAGTGTCATGAGCTTTTTTATCATGCAGTTGTTGCCTCTGATTAAGTGTTGAATTGGTGTAGTTTGAAGTTTTCTGGTCATGCAAATCCTACCTATGTACATATACAGAAATTGTACACATTATGATGAGTTAATGGAAACAATTTTGTTGAATCAGGGATGCAAGCCTTTAGAGCGCATGGACATAGTTGGTGGATCATCAGCAGCAAGTCCTTGCTCATCCTACCATCCAAGTCCATGTGCTTCCTACAATCCAAGCCCAGGCTCATCTTCCTTCCCAAGTCCATCTTCATCTCCATACACCAACATTCCTAATGCTGATGGCAATTCTCTCATTCCATGGCTCAAAAACCTCTCAACTGCTTCATCTTCTGCATCGTCTCCAAAACTTCCCCATCTCTACCTCCACAGTGGCTCCATCAGTGCTCCTGTCACACCTCCTCTGAGCTCTCCAACAGCCAGAACACCACGAATCAACGCCGAGTGGGAGGATCAGTCTGTGCGGCCGGGGTGGACCAGACAGCAGCACTACTCATTCCTGCCATCTTCTAGTCCTCCGAGTCCCGGGCGCCAAGTTGTTGACCCCGAATGGTTTGCTGGGATCAAACTTCCTCATGTTAATCCAACCTCACCAACGTTTAGCTTGATCTCCTCAAACCCTTTTGCCTTCAAGGAAGATGGTTTGGCCGGCAGTGGTTCAAGAATGTGGACTCCTGCTCACAGTGGAACATGCTCTCCTGCTGTTGCACCAGGAACTGATAACAATGCTGACATTCCAATGTCTGAAGCTGTTTCAGATGAATTTGCATTTGGAAGCAACATGCTGGGGCTTGTGAAGCCATGGGAAGGAGAAAGGATTCATGAGGAATTTGGATCAGATGATCTTGAACTCACACTTGGTAACTCAAAGACCAGGTTTGTACCTTCTTCACCATATAAATTGCTGTTCAACTCACTCTTTTAACCATTCATCAGGAATTCTGCATAATTATCTTAAAAGTTGACACTTAACAGTGTAAAAATCTTAAAAATGATGTTTACTTTTTGGCAGATGAAATTGCAAATAGGAGGAATGTGAGGAATTGAATGTGATTATGGGAAGATTGACTTGTGTTGGTTTTGTTGAGTAGAGATGATATGATGATAGAGAAGGTAAGTGAGGTGAGTGGAAGGAGTTGGTTTCTTTTATTTATTTATTTTGATGACTTTCTCTTTTGAATTTATAGTTGTTGAGTAATATACATGTTTAGTTAGGTGTGGGGTGGATTTGCAACCCATACATCATTGTACTTGTTGTTAAACCTTATTATTGGAAACATCAGTATACATTGTATGGATTGGCTTGGTTTGCCACTCAAAAAACTCCACAGATTGCAACCTAACATTGTGTG