Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12025 LG3 9222131 9225679 hypothetical protein Csa_4G056780
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   red, far-red light phototransduction, red or far-red light signaling pathway, positive regulation of transcription, DNA-templated, negative regulation of leaf senescence, red, far-red light phototransduction, negative regulation of leaf senescence, response to far red light, positive regulation of circadian rhythm, positive regulation of transcription, DNA-templated, negative regulation of leaf senescence, red or far-red light signaling pathway, negative regulation of leaf senescence, red, far-red light phototransduction, circadian rhythm, red or far-red light signaling pathway, red, far-red light phototransduction, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, positive regulation of circadian rhythm, red or far-red light signaling pathway, red, far-red light phototransduction
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, zinc ion binding, DNA-binding transcription factor activity, DNA-binding transcription activator activity, RNA polymerase II-specific, protein binding
No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_12025.1
MDIDLRLPSGEHDKEDEETTTIDNMLDSEEKLHNGGIDGRNIVDAGIEVHALNGGDLNSPTVDIVMFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQNKQDSENSTGRRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQTRRMYAAMARQFAEYKTVVGLKNEKNPFDKDSDTWNKLATLKTPSPLEKSVAGIFTHAVFKKIQAEVVGAVACHPKADRQDDTTTVHRVHDMETSKDFFVVVNQVKNIIGEESEHMLTRVQRYNDLCQRALKLGEEGSLSQESYSIAFHALHEAHKSCVSVNNSSKSPTEAGTSGAHGQLSTEEDTQSRNIGKPNKKKNPTKKKKVNSEAEVMTVGALDNLQQMEKFSTRAAVTLEGYYGTQQSVQGMLNLMGPTRDDYYGNQQTLQGLGPISSIPTSHDGYYGAHQGISGLAQLDFLRTGFTYSIRDDPNVRATQLHEDPSRHA*


CDS Sequence:
>Vu_12025.1
ATGGATATAGATCTCCGGTTACCTTCTGGTGAACATGATAAAGAGGATGAAGAAACAACTACAATTGATAACATGCTGGACAGTGAAGAAAAATTGCATAATGGAGGTATAGATGGCAGAAATATAGTTGATGCTGGTATTGAGGTACATGCTCTAAATGGTGGAGATTTGAATTCACCCACAGTTGATATTGTAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTTTACCAAGAATATGCTCGGTCAATGGGATTTAACACTGCAATACAAAATAGTCGTCGTTCAAAAACATCAAGAGAATTTATAGATGCGAAGTTTGCTTGCTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTTAATCGACCACGTGCTCGACAGAACAAACAAGATTCTGAAAATTCAACAGGTCGAAGATCTTGCTCTAAAACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGTCAGATGGAAAATGGGTTATACATAGCTTTGTGAAAGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTTAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCTAGGCAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAGAATCCATTTGATAAAGATTCTGATACTTGGAATAAATTGGCAACTTTAAAAACTCCTTCACCTTTGGAGAAGAGTGTTGCAGGGATTTTCACTCATGCTGTATTCAAGAAAATTCAAGCTGAGGTTGTAGGTGCAGTTGCCTGTCATCCTAAAGCTGACAGGCAGGATGATACAACCACAGTTCACAGGGTTCATGACATGGAAACAAGTAAAGACTTTTTTGTTGTGGTGAATCAAGTGAAGAATATAATTGGAGAAGAATCTGAACACATGCTAACTAGAGTGCAACGGTACAATGATTTATGTCAGCGAGCACTGAAGCTTGGTGAAGAGGGATCATTGTCCCAAGAGAGTTATAGTATTGCATTCCATGCACTACATGAAGCACACAAAAGTTGTGTGAGTGTTAACAATTCTAGTAAGAGTCCTACAGAAGCTGGTACATCAGGGGCTCATGGTCAGCTTTCCACTGAAGAAGATACACAAAGTAGAAATATAGGCAAGCCAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTGAACTCTGAAGCAGAAGTGATGACAGTTGGTGCCCTAGACAACTTGCAACAAATGGAAAAATTCAGCACAAGAGCAGCAGTAACCCTTGAAGGTTATTATGGTACACAACAGAGCGTGCAAGGAATGTTGAACTTAATGGGACCAACTCGTGATGATTACTATGGGAATCAACAGACTCTTCAGGGGCTGGGACCAATAAGTTCAATACCAACCAGTCACGATGGTTACTATGGTGCACATCAGGGCATTTCTGGTCTGGCACAATTAGATTTTTTGCGAACTGGCTTCACATATAGCATTCGGGATGATCCTAACGTGAGAGCAACACAGTTGCATGAGGATCCATCAAGACATGCATGA


Promoter Sequence:
>Vu_12025::LG3:9220131-9222131(+)
AAGTAAGTTTTGTACTCACTTATACACTATAATTTGACCATATCTCTAGTTGATGTGAGATCTCCAACAATGTAGATATTTTTGCTTTCGGTGAATGTGACATTGTCCTGTTAGCTTGGAACATTTTAGTTCCACTAATTTTTGAAGCTTTGATATGAGTAAATAGGGCTAAGCTTCAAATATCAACTTGGTTGGAGAGAAACCCCAAAGTTTTCAATAATAAATCCTTTGTATGGTATATAACAGTCTTCTTTGCCTCTTTATCGCATTCAACTTATGAGGTTTTAGAGGGATTTTTGGGTAAATGAAAAATAGTTTAATGACTTTACACTCCTATGATGAGCTTTTTATAGCCCATTCTTTGTTCTTTAAAGAGGATTTCTTGGTCTTCGAGAGAAACCCCAAAAATTAAATTTGGCTGTTGTGAAACTTAGCTGTTTGTGAGTTCTAAAAGAGGTTAAAAAATCCTAGACTTTGATGACAAAAAAATGCAACATAACACACTCCTTTCACTTTACGACACTTTACCCATGGACACTTCACTCAACTTAATCAATGGTAAACACCCTCTGTAGGTAGCCATTTTTGAAGCATCGAAATTCAATTCTGATACAAATTTGATAAGCACCCTAGCACTAGAGGAATCCACCCTCAATATATAGCAAGGGGGGAGAACAAACACTTACATAACCCATCGAACATCTCATTACTTGATAAGGGACTTGGGTACTCTATATACCCAAGTTCTTATCATGTGATCACCAAATACCCATTATAACCCTTTATTGGAAGTCAAACCACTTGTTCGCACATCTAGGTGACATGGCACTGTCGGTGCTGTTGCTAGCCTCACCTCTACTTACACAATAGAACAATTGATATAATTTGGTTTATCTATTTGGATGGGATTTTGATACAGACCCACACCTTAAAAGCTTATAAGAAAAAGAAAGGAATGAAATGAACACTGATGTATGTATTGTTCTGTCAACAAAAACATGAAATAGAAGGATAACAAATCGCGCCCAGGGCTACCCTCCTCTCTAGAGCAACACGAACGGTTCCTCTCCTCTGTCAACCAAAATCCCAGTCCTCCCCAACGTTTAGCAAAAACTGGATACAAATAGAATCTCTCCATTCCCCTCCTGATTTCTCCCTCCTCTAACTACCTGCCACCTCAGCCCTTGGATTCTTCTTTCTCACGTATACTTTTCCCCACTGTGCTTGGTACCTTCGTGGGCTAGAGGTTGAGGAAGCCCACTCATTCTCTGGGCCTCGTCAGATATGAAAGAGAGTGTTCTCCTAGCATTTCTCATATTCAAATCAGGTCCCTATTTATTTAGTCGTTATTTTGTGCAGCATATGAATTTCTGCGGAAAATGACTTAATTTCCATGGCAGCCTTCATTTTCTCTTCTCAAGATCATGTAAAGAATTTGGGCCCTCTATAAATTGTCATGGAACTTACCCCTAAATTAGGAGCATTGGTTGGTTACTAATTGATGTTTCAAAATATGTACATATGCTTATTATCTGTGACTGTTTCTGCCTATAATAAGGTTATGCTGTCAATTCTTCTATAGATGATTTAACTATCTTGTGCCTTTAAACTAGCAAATTGTTTTCCTTTTTAGTTAAAATTCCTTGTCATGATCTATATAGCTTTCTTTTGTTCCTAGAAAATGCATTGGTTGGTTACTAATTGATGTTTCAAAATATGTACATATGCTTATTATCTGTGACTGTTTCTGCCTATAATAAGGTTATGTTGTCAATTCTTCTATAGATGATTTAACTATCTTGTGCCTTTAAACTAGCAAATTGTTTTCCTTTTTAGTTAAAATTCCTTGTCATGATCTATATAGCTTTCTTTTGTTCCTAGAAAATGCATAATCACACAGGGAGGCAGTTAATGAGGTGAATTACTTGATCGTTTGACATGCCTTTCCTTTATATTTTTCAGTACCCTTGAAACCACTGAGCCGAAAGCTTCTTTCGTCA


Gene Sequence:
>Vu_12025(+)
ATGGATATAGATCTCCGGTTACCTTCTGGTGAACATGATAAAGAGGATGAAGAAACAACTACAATTGATAACATGCTGGACAGTGAAGAAAAATTGCATAATGGAGGTATAGATGGCAGAAATATAGTTGATGCTGGTATTGAGGTACATGCTCTAAATGGTGGAGATTTGAATTCACCCACAGTTGATATTGTAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGAAGCTTATTCTTTTTACCAAGAATATGCTCGGTCAATGGGATTTAACACTGCAATACAAAATAGTCGTCGTTCAAAAACATCAAGAGAATTTATAGATGCGAAGTTTGCTTGCTCCAGATATGGAACAAAACGAGAGTATGACAAATCATTTAATCGACCACGTGCTCGACAGAACAAACAAGATTCTGAAAATTCAACAGGTCGAAGATCTTGCTCTAAAACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGTCAGATGGAAAATGGGTTATACATAGCTTTGTGAAAGAGCATAATCATGAGCTTTTACCAGCCCAAGCAGTTAGTGAACAAACAAGAAGAATGTATGCTGCAATGGCTAGGCAGTTTGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAGAATCCATTTGATAAAGGTCGGAATTTGGGCCTGGAGTCAGGGGAGGCTAAACTCATGCTTGATTTTTTCATACAGATGCAAAATATGAATTCTAACTTCTTTTATGCAGTAGATCTTGGTGAAGATCAACGTCTGAAAAATCTTTTATGGATTGATGCTAAAAGTAGGCATGACTATATCAACTTTTGTGATGTAGTGTCATTTGACACCACGTATGTTAGAAACAAATATAAAATGCCTCTTGCACTTTTTGTTGGAGTGAACCAGCACTACCAATTTACATTACTTGGATGTGCCTTGATATCAGATGAAAGTGCTGCCACTTTTTCTTGGCTATTTCGGACATGGCTGAAAGGAGTTGGTGGTCAAGTTCCAAAAGTGATCATTACTGACCATGACAAGACATTGAAGTCAGTTATTTCAGACATCTTTCCTAATTCTAGTCATTGTATTTGCCTATGGCATGTATTAGGGAAGGTATCAGAAAATTTAGCTCCTGTAATTAAAAAGCATGAGAATTTTATGGCAAAATTTGAAAAATGCATTTATAGGTCCTTGACCAGTGATGATTTTGAGAAGAGATGGTGGAAAATTGTTGATAAGTGTGAACTTCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGAAAGTTATGGGCACCAACATTCATGAAAGATGTTTTCTTAGGTGGTATGTCTACTGTCCAGCGATCTGAAAGTGTAAATTCCTTCTTTGACAAATATGTTCATAAGAAGACCTCTGTCCAAGACTTTGTCAAACAGTATGAATCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAAATTGGCAACTTTAAAAACTCCTTCACCTTTGGAGAAGAGTGTTGCAGGGATTTTCACTCATGCTGTATTCAAGAAAATTCAAGCTGAGGTTGTAGGTGCAGTTGCCTGTCATCCTAAAGCTGACAGGCAGGATGATACAACCACAGTTCACAGGGTTCATGACATGGAAACAAGTAAAGACTTTTTTGTTGTGGTGAATCAAGTGAAGTTCGAGTTGTCTTGTATATGTAGGTTATTTGAATACAGAGGTTATCTTTGTAGACATGCATTGATTGTTCTTCAATATTCTGGACAGTCAGTGTTCCCGCCTCAATATATTTTGAAACGGTGGACAAGAGATGCAAAGCTCAGGAATATAATTGGAGAAGAATCTGAACACATGCTAACTAGAGTGCAACGGTACAATGATTTATGTCAGCGAGCACTGAAGCTTGGTGAAGAGGGATCATTGTCCCAAGAGAGTTATAGTATTGCATTCCATGCACTACATGAAGCACACAAAAGTTGTGTGAGTGTTAACAATTCTAGTAAGAGTCCTACAGAAGCTGGTACATCAGGGGCTCATGGTCAGCTTTCCACTGAAGAAGATACACAAAGTAGAAATATAGGCAAGCCAAACAAAAAGAAGAATCCAACTAAAAAGAAAAAGGTTTGCTGTTTATAAGAACTTGACTTCTACGCTTTCATGTTTTTGCTATATGACCTTCTCTATGACTTGCAGGTGAACTCTGAAGCAGAAGTGATGACAGTTGGTGCCCTAGACAACTTGCAACAAATGGTTTGTTCTCCTACAATTCGTTAACCCTTAAAAATGTTTGATCTTTTAGTCTTTGGGATAAAAACATGTAGATGAAAAGTTATGAAACAATACATGTGAATTTCAATTTATTTTAATGAATACATGTGTCAGCTTGCTTGAATTACACAGCCGTTCAGTTAAAAGGAACCTTCTTTTGCAGGAAAAATTCAGCACAAGAGCAGCAGTAACCCTTGAAGGTTATTATGGTACACAACAGAGCGTGCAAGGAATGGTATGAATACGACATACTAAAGTTCTAATATTTTATAATATATATTTAATGAGTTAAACTTTATAACATTTTTTTATTTCATGATGGTGTAGTTGAACTTAATGGGACCAACTCGTGATGATTACTATGGGAATCAACAGACTCTTCAGGGGCTGGTGCGTAAAAGAACTTGTGATAATCTTTTGTTAAATATTTTTTACAGTATAATAATATAGAAACTGTGTTTACATGTGTAGGGACCAATAAGTTCAATACCAACCAGTCACGATGGTTACTATGGTGCACATCAGGGCATTTCTGGTCTGGTATGGTTTACTAAAAGCCAAGGATAATTTTCTTTCCCTCATAATGTTTGATGAATTCTTATACGGTTCAAACATGCAGGCACAATTAGATTTTTTGCGAACTGGCTTCACATATAGCATTCGGGTTAGTATGGTAATTCAAACATTCTTACTTAATATTTTTTCTGAAGAGCACTTCTATAAATAGCTTCATTGTGGCAGGATGATCCTAACGTGAGAGCAACACAGTTGCATGAGGATCCATCAAGACATGCATGATTGTCATGTTATCCTTTTGGAACAAGGTAGTTTATATTTTGAGCCAACCCCAATATTTTGTTGTGATTAAATGAGTAATTTCGTTGAAGACGAATGTTTCAAGTTGTGTTTCAAATTGTTCCTATTTATAGGCTGATGAAGTGAGAGCTACTAGATGATTTTCTGGCGTTGAGAATGGATACCTCTTGGCCATTTGAGGTTATAGTGGAAAGTCTCCAAATCCAGTATTTGTAATATAATACTGTTATATTAATAATATAATATAGGATAACTGCAATTAAAGTCTACTATAAATATTAATAGATATTGTAAGGCTTTAGCGATCAACCTCATTTGGAGATTGTTGTATTATATACTTATTCTTTAGGCTGCTTGAGAAATTGTAATTATGAAATATTTGTTAGGAATGAAGTATTTCGCATGCTTATTTCCTTT