Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12274 LG3 14800500 14801165 PREDICTED: dehydration-responsive element-binding protein 1B-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to cold, positive regulation of transcription, DNA-templated, cold acclimation, positive regulation of transcription, DNA-templated, response to cold, positive regulation of transcription, DNA-templated, response to cold, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, response to water deprivation, response to cold, cold acclimation, cold acclimation, cold acclimation, cold acclimation, response to cold, positive regulation of transcription, DNA-templated, response to water deprivation, response to cold, response to cold, positive regulation of transcription, DNA-templated, cold acclimation, positive regulation of transcription, DNA-templated, response to water deprivation, response to cold
Cellular Component   located in   nucleus
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, DNA binding, protein binding, protein binding, protein binding, protein binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 14800538 synonymous_variant p.Cys13Cys
C/A 14800737 missense_variant p.Pro80Thr
C/G 14800783 missense_variant p.Ala95Gly
C/A 14800938 missense_variant p.His147Asn
A/C 14800939 missense_variant p.His147Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12274.1
MINMNMKNNESPCSKSQSPPKSDPLCDSSNPSHKRKAGRKKFRETRHPVYRGVRQRNGNRWVCEIREPVKKSRIWVGTYPSPEMAARAHDVAVLALNGISAKFNFPDSVSLLPLAKSSSAADIREAAKTATVDDTFTPNTSFSCSSHGNSSFEENGNAEESFLNTSIHNDESETVFFDEEALYNMPGLLDSMAEGLLITPPSRALDWDHSDSEIDLTLWNN*


CDS Sequence:
>Vu_12274.1
ATGATTAATATGAACATGAAGAACAACGAATCTCCTTGTTCCAAGTCACAGTCTCCACCAAAATCTGATCCATTGTGTGATTCTTCAAATCCATCTCACAAGAGGAAAGCAGGTAGAAAGAAGTTTAGGGAGACACGGCACCCTGTGTATAGGGGTGTACGCCAAAGAAACGGAAACAGATGGGTGTGTGAAATTAGGGAACCAGTGAAAAAGTCAAGGATCTGGGTAGGCACATACCCTTCTCCTGAAATGGCTGCTAGGGCACACGACGTGGCTGTTTTAGCCCTTAATGGCATCTCTGCTAAGTTCAATTTCCCCGATTCAGTTTCCCTTCTTCCTCTTGCAAAGTCTTCTTCTGCTGCAGATATAAGGGAAGCAGCAAAAACTGCTACTGTTGATGATACTTTCACGCCAAACACATCTTTTTCTTGTTCCTCTCATGGAAATTCTAGTTTTGAAGAAAATGGGAATGCAGAAGAGAGTTTTTTGAACACGAGCATCCACAATGATGAGTCTGAAACAGTGTTCTTTGATGAGGAGGCACTGTATAATATGCCAGGTTTGTTGGATAGTATGGCCGAGGGATTGCTAATTACTCCACCCTCTAGAGCACTGGACTGGGACCATTCTGATTCTGAAATAGACCTTACTCTGTGGAATAACTGA


Promoter Sequence:
>Vu_12274::LG3:14798500-14800500(+)
TTTTTGGATACGAGGGACACCAAACTTTTGTTGGCGTTCGGGTGAGTACGGAAGTAATGTGGAAAGATGAGAGGAGTTGGGGTGATATCGAATACCGAACAGAGCACCCTAAAGGTTTGAGGTAAGAAGGTAGGTGATCTGCATTTATTGCACTATTAATATTTGAACTGTCAACATTAAGTTGACTTTAACATCAAAGTGTCTTGTGCAAGTACCCTCTGAGTGGTTTGGACAAGCAGTAACACTAGAACTTGGACTTTATGACAACTTTCGAACCCCAGATGACTCACCAAACTTTGAATCGTTGACCTCGACCCTACATTCTAAAACAAATTGTATAAGAAGATTTAAAATTTATTATAGAAAAATATACAAAAGTTTGTATTATGTTAAGTAATATTATTTGTTCATATCCGACTCAAAATATATTATTATCATTAGGTCCAAAATGGTCTTATAGTCATGTGATCCAAGTGTGAGATTTATAAATTGAATAAAATTATTATATCTATTAATATGTTGTTATATTTTGAATTTATCTTAATTGTTGTTATACTAATAGGCTCACAAAAGAAAGTAGGGATGACAAATATAGTCATGCATGTAGGTATGTATAGATAAAATCTACCACGGATAATTAGTACTCATGAGTATTTATTATACGCGGATGGCGATTTATAGGTATTTTAATACTAATTTATAAATGGGTGTGGATATTATACTATTTGTATCTGCGAGTATCTATTAGCGACAAACAATTAAAATTAAAATTTAATTTATATTTTATTCAGGTAAATTTAATTAAAATTTAAATTAAATTATATTTTATTAAGTTAAATTTAATTGAAATTAAATTTTAATTTATATTTAATTTAATTTATATTTTATTTTATTTTAGTTTTACATAGATTTTATTTTAAAAATTTATTGAATTTTTTTAAATATATAAGGATACTTACGGATACCCATACGTTTTAAAATACTTGGAGATATTTTTTAGACAAATATTCAATGGATAACCAAACACATGATAAATGAACTTTTTTGTTATGGAAGTGCTGATAGAAATTATTCGCGCTCGACTTGATTCATTATCATCTCTACACATAAGCGTATAAATATCCCTTTAGTAATAATCTAACTTAATACTAATTTTATATTCTAATACTTCGAAATTCTTGTAGGTAAATTTCTTTTTATCAATCAGGAACTCATCAACTTGGATCAACCCAATAATTTTTTTAATAACATATTTATGTTTATTCAAAGATATATGTTTTCAAACGTCAAACTACCTTAATTTTTGTGTGTATTTTTTATCTAAATTTTAAAAAAGGATTATTTTCCTATTTCGTTATTTCCAAAAGTTGATGGCAATATCACTCGTAATGATACCTTTATAGCTTTAAATATTGCAACCAACTCAAGTTCGTCACATTGTGTATTTTATCATCACATTATACAAATCTGAATAATATAATATCGCCCACACTTTCACTCTTATTTCACTTCCTTTTCACCATATCTCTTCTATATCGTTTGTTCACCACAAACTGTTAGTTTTTTTTTCTCTTTTTCTTTCTATTTTTATCTGTCACTTCTTTTACCCACAGTGTAGCCTGGTCTAACAGTTTACATTCTTTGAATTTGAATACCACCTTTCATCTCACCCCTGCTCGCGACACGACATCCATTGAGGTCACAAAACCAGAATCCAGGGTTAAACACTCTTAAAATCTGTTCTTCACACCCACGTGGTCTCCCAAAACCAACCAAAGCAATGATATTCATAACGTACATGTGTCGCACGTGTACGTGTCCAAATCGTGTTTATCATTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTACTGAATCAAGTATCATCTTCCTCACACACAGACAACACACCATTTTCTCTTTCTTCTCCATTCTTATGCTTCATCTTTTCCAAAACTCAAATAGATACAAA


Gene Sequence:
>Vu_12274(+)
ATGATTAATATGAACATGAAGAACAACGAATCTCCTTGTTCCAAGTCACAGTCTCCACCAAAATCTGATCCATTGTGTGATTCTTCAAATCCATCTCACAAGAGGAAAGCAGGTAGAAAGAAGTTTAGGGAGACACGGCACCCTGTGTATAGGGGTGTACGCCAAAGAAACGGAAACAGATGGGTGTGTGAAATTAGGGAACCAGTGAAAAAGTCAAGGATCTGGGTAGGCACATACCCTTCTCCTGAAATGGCTGCTAGGGCACACGACGTGGCTGTTTTAGCCCTTAATGGCATCTCTGCTAAGTTCAATTTCCCCGATTCAGTTTCCCTTCTTCCTCTTGCAAAGTCTTCTTCTGCTGCAGATATAAGGGAAGCAGCAAAAACTGCTACTGTTGATGATACTTTCACGCCAAACACATCTTTTTCTTGTTCCTCTCATGGAAATTCTAGTTTTGAAGAAAATGGGAATGCAGAAGAGAGTTTTTTGAACACGAGCATCCACAATGATGAGTCTGAAACAGTGTTCTTTGATGAGGAGGCACTGTATAATATGCCAGGTTTGTTGGATAGTATGGCCGAGGGATTGCTAATTACTCCACCCTCTAGAGCACTGGACTGGGACCATTCTGATTCTGAAATAGACCTTACTCTGTGGAATAACTGA