Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12463 LG3 17129073 17132548 mitogen-activated protein kinase 3
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to freezing, response to L-glutamate, pollen tube guidance, response to bacterium, response to freezing, pollen development, protein phosphorylation, inflorescence development, plant ovule development, camalexin biosynthetic process, signal transduction, camalexin biosynthetic process, inflorescence development, response to cold, regulation of stomatal complex development, inflorescence development, pollen-pistil interaction, abscisic acid-activated signaling pathway, response to osmotic stress, pollen-pistil interaction, plant ovule development, intracellular signal transduction, protein phosphorylation, plant ovule development, response to chitin, abscisic acid-activated signaling pathway, regulation of stomatal complex development, abscisic acid-activated signaling pathway, priming of cellular response to stress, pollen tube guidance, priming of cellular response to stress, response to wounding, inflorescence development, response to cold, protein phosphorylation, plant ovule development, abscisic acid-activated signaling pathway, response to UV-B, camalexin biosynthetic process, response to bacterium, regulation of stomatal complex patterning, regulation of stomatal complex development, response to oxidative stress, pollen tube guidance, pollen tube guidance, response to oxidative stress, pollen-pistil interaction, response to osmotic stress, pollen tube guidance, camalexin biosynthetic process
Cellular Component   is active in   nucleus, cytoplasm
Cellular Component   located in   cell cortex, nucleus
Molecular Function   enables   protein kinase activity, protein kinase activity, protein binding, protein kinase activity, protein binding, protein serine/threonine kinase activity, MAP kinase activity, protein binding, protein binding, protein binding, MAP kinase activity, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein binding, protein kinase activity, protein binding, protein binding, protein binding, protein kinase activity, protein kinase activity, protein binding, protein binding, MAP kinase activity, protein binding, protein binding, protein binding, protein binding
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
A/C 17129115 3_prime_UTR_variant
A/T 17129228 3_prime_UTR_variant
G/A 17129283 3_prime_UTR_variant
C/A 17129505 missense_variant p.Arg361Ser
T/C 17129740 downstream_gene_variant
C/T 17130098 downstream_gene_variant
C/G 17130106 downstream_gene_variant
G/A 17130481 synonymous_variant p.Leu150Leu
C/G 17130741 missense_variant p.Gly100Arg
A/T 17130751 splice_region_variant&intron_variant
C/A 17130831 downstream_gene_variant
A/G 17130833 downstream_gene_variant
A/C 17130997 downstream_gene_variant
G/A 17131012 downstream_gene_variant
C/A 17131456 downstream_gene_variant
A/G 17131457 downstream_gene_variant
C/A 17131478 downstream_gene_variant
G/A 17131568 synonymous_variant p.Leu84Leu
C/T 17131571 synonymous_variant p.Thr83Thr
C/T 17131755 downstream_gene_variant
A/G 17131834 downstream_gene_variant
T/A 17131913 synonymous_variant p.Pro41Pro
G/T 17131945 missense_variant p.Leu31Ile
T/A 17132063 5_prime_UTR_variant
C/A 17132390 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12463.1
MAGGNPNGVADFPAVSTHGGQFIQYNIFGNLFEVTTKYRPPIMPIGRGAYGIVCSLLNTETNELVAVKKIANAFDNHMDAKRTLREIKLLKHLDHENVIGLRDVIPPPLRREFNDVYIAMELMDTDLHHIIRSNQSLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNSNCDLKIIDFGLARPTMESDFMTEYVVTRWYRAPELLLNSSDYTSAIDVWSVGCIFMELMNKKPLFPGKDHVHQMRLLTELLGTPTDADLGLVKNEDARRYIRQLPQYPRQPLAQVFPHVHPAAIDLVDKMLTIDPTKRITVEEALAHPYLEKLHDVADEPICMEPFSFEFEQQPLDEEQIKEMIYREALALNPEHA*


CDS Sequence:
>Vu_12463.1
ATGGCCGGAGGTAATCCGAATGGCGTAGCTGATTTTCCGGCGGTTTCGACGCACGGCGGACAGTTCATTCAGTATAACATATTCGGCAACCTCTTCGAGGTTACGACGAAGTACCGTCCTCCAATCATGCCTATTGGACGCGGCGCTTACGGAATCGTTTGCTCGCTGTTGAATACGGAGACGAATGAGCTGGTGGCTGTTAAGAAAATAGCGAACGCTTTCGATAATCACATGGACGCTAAGCGAACGCTCCGTGAGATTAAGCTTCTTAAACATTTGGATCATGAAAATGTAATTGGTTTGAGAGATGTTATTCCTCCACCATTGCGTAGAGAGTTTAATGATGTCTACATAGCGATGGAACTCATGGATACTGATCTTCATCATATCATTCGCTCTAATCAAAGTCTTTCGGAGGAGCACTGCCAATACTTTTTGTATCAGATTCTCCGTGGGCTAAAGTATATACATTCTGCAAACATAATCCACAGAGATTTAAAACCGAGCAACCTGTTGTTGAATTCTAATTGCGACTTGAAGATTATTGACTTTGGTCTTGCCCGACCAACTATGGAAAGTGACTTCATGACAGAATACGTAGTCACAAGATGGTATAGGGCTCCCGAATTATTGTTGAACTCCTCAGATTACACCTCTGCGATAGATGTGTGGTCTGTTGGTTGCATCTTCATGGAGCTTATGAATAAAAAACCTCTCTTTCCAGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGCTTCTTGGCACCCCAACTGATGCTGACCTTGGGTTAGTAAAAAATGAAGACGCAAGAAGATATATTAGACAGCTTCCTCAATATCCTCGCCAACCTTTAGCTCAGGTCTTCCCCCATGTTCATCCCGCAGCCATTGATCTTGTTGATAAAATGTTGACAATTGATCCCACCAAAAGAATTACAGTTGAAGAAGCGCTAGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAATCTGCATGGAGCCATTCTCTTTTGAGTTTGAGCAACAACCATTGGATGAAGAGCAAATAAAAGAGATGATATACAGGGAAGCATTAGCACTCAATCCTGAGCATGCTTAA


Promoter Sequence:
>Vu_12463::LG3:17132548-17134548(-)
CTAATTAACATTTTCAAATTATTATTTTATAAGAAATTGTTTAAGTCAAATAAATTCATAAGTGTCAAACACCATAATTCTATATTCTCTTTCTCCACTAGATCTTGTTATAGCACAGCACTTTTTTCTTACTTTTCTAAAAGATAAAATTATCAAATAAATAGTAGTTTTTTAAAAATAATTGCAATAATGTAGAGAATCTGAGAAGAAGAAAAAACCACTAAAAGACTCTTAATTTGAAAAATATTAAATTACACAAAAAACTTTCTAAAAATTTCTCAAATTACTTTGATATCCCAATTTTTTTCAAAATCCTTCACAAAGAAGTCATTTAAGAAAAAGTAATTTAACTTATTAATTTTTTTGAAGGTCTGAACTTGCTTAAGTGTTTTTCATCATACTAAATACTATTCAAGTCATTTTCTTATGTTTTCTTTAGGATATAGTCAATTTATACTTTTAACACGTGAATTGTTCCGCGGAATTTTGTTATTTAACCATAAAAGTTCATAAAATGCTGTACCTTATTTATTTAAACCGAGATTAGTGTTAATTTAAATATTATGCCGAGGGCCCAGAAGTATAGAAGGCGATTTGGGGAAGATTCTTCATTGATGTAGATTGAAAAGGTTGACACATAATAACTTCAGTTATTATTCAATCACTGCTTGAGGAATAAAATCAAATAGTGTTTTTTAATCACAAATAATTGATAACTACGATTAAACTCCAAATATATGAACTATAATTTCTAATTATGGACAAAAATTTAAATTTAGATTTTAAGTATAGGTACGCGTCACGGTTTTAAAAAGACTGTTAAATGGATAATATACGGATTTAAATAAAAAGATACAAATAATGTAAAATAAATTCACACTACCATTCGATAAATTTTAATTTTGGAATTTTATCCTTCCATTAAATTAAAGACACGAATACATTATGTAAAAAATTAAGTCCAACATTTGAATTATATAAGTATTTTCATAATTAATAATTATAAAAATATTCTGATTTAAAATTTAGTAATTTGAACCAATGTATTTAAATGATTTAAATTTAGGTTATGTTCATATTTGCAAAGAGGAATTTCTCTTGAAGTTTACACATGAAATTTCTTAAATACTGAAAACAACCTCTTCACAGAAGTTGTATACTGAAAAATTAATTTTGTGTTTTGAGTTCATTAATTCTTAAACTTTCAGTAATAATACATCTTTGGGTTAAATATGTTTTTAGTCCCTAAACTATTGACCGTTTCTGGTTTTCGTCCCTCTTCCAAAGTAAGGTACAATTTAGTCCTCAATCTTTAAAAAACGTTCGTTTTAGTCGAAAAAACGAACGTTTTGAGGACTAAAACGAGGACTAAAAACAAAATTTTGAGGACTAAAACGAACGTTTTTCTAAAGAATGAGGACCAAATTGTACCTTACTTTCGAAGAGGGACGAAAACCAAAAACGGCCAATAGTTTAGGGACTAAAAACATATTTAACCCTACATCTTTTTTTGGGGTAAACTTAACCATAAAACAATATAATAAGATGTATTATCTAATAATTCAACTTTAAAATATTTCAATAGAATATAAAAAATAATGAACTTAGTCGAGACAAAGCAGTGGACTTTTTGGCATTGTCACTGGCACAGCTTTGTCTAATGTAGTTGTTAGAGATAGATTAGCAAATAATGGAATTGTTTATTATCCTAATCAATTATTTGCGCAATAGTAAAAAATAATTTAACGAAAGTATTTATCTTAAGTGAATGAAAGGGTCCAAAAAGCCCAAACAAGAGAATCAAATAATTTTATTGGTTATACATTAAATATATGGAAATAGGCACAAGTCAAAATTTGTACAAAATAATTACACGCTTCTGACTCAATTATTCAGTTTCTTCAGGCTAAGGATAACATTTGATATTTATTTATTGTTATAGATTTATTTATTTATGTAAATCTATAATATAAAATCCACGAGGTGGCTTTGACGAACAT


Gene Sequence:
>Vu_12463(-)
ACAATACTAATCACGTAATAATACAAGAGGAAAGAAAGGTTGATGGCTGTTGAAATAATTGAACAAAACGGTGGCCGTAGATGAGAGGCGGCTGAAATCAGAGCCGTCCGATTAGTCCCAAACGCGTCGCACGTGTGCGTGTGTGGTTCGTTCTGTTAGTTTTCTTCTCATGGCGCGTTTTCGCCCCGTCTTCCTGGCACCTGCTCCGAAAGAGTGTGAAGACTCAACGTGCTTACCAGGCCGAGTTGACCGAGCGAAAGTAGTTACACGTACGCACGCACGCACACACTGACTCGGTGACTCACTCGTTCGTTGATACTATTTAAGTTAAAACCGCTCCACTCGCCTCTTCCACTCTCTATCTTCATCCCTTTCTTCTTTGACGGTTTCTAGAAAGAGAAAGTTTGTTAGAGGGAGAAAGCGCGGTGGTGCGGTTCGCGAGTGAGAAGAGAGAGAAAACGCTCTTCTCTGAACGGTTTCTAGAGAGGGAAAGTTTCATTGAGGGAGAAAGTGATGGCCGGAGGTAATCCGAATGGCGTAGCTGATTTTCCGGCGGTTTCGACGCACGGCGGACAGTTCATTCAGTATAACATATTCGGCAACCTCTTCGAGGTTACGACGAAGTACCGTCCTCCAATCATGCCTATTGGACGCGGCGCTTACGGAATCGTTTGGTACTGCTTCGTTTTCTTCGAGTTATTGTGGTTTTGGAAATGCGATTGGTTTAATTGAGAGATTGTGTGGTTCTCTGATTATATGAATCCGATTCGGTTGTGATTGAATGTTGGCTAGTGCATGAGTGTTTGGTTTTGTTGTTTTTTTATTTTTATTTTATTAATGTTTTTGTGAGATTATGAAATCTGAATAGTCCGTTGATGTGATTTTTGAAGCTCGCTGTTGAATACGGAGACGAATGAGCTGGTGGCTGTTAAGAAAATAGCGAACGCTTTCGATAATCACATGGACGCTAAGCGAACGCTCCGTGAGATTAAGCTTCTTAAACATTTGGATCATGAAAATGTGAGTGATCTCTCCTTTGTTTGACTTACAGATATATCGTATCATCGAATGGTACAAATGTAATACATGCTTGGTTTTGGTTGGCGAAATTATTTTCTTAAACTGTTTTTATTGTGACACGTATTTAACTGAAATTTTCACTTTATAATCAATTAAAAATGAATAAATGGAGTATGGACTCAGAATTATCCTGATTTATAGTTACAAATTAACGTGATAAATTTATTTCCCTTATATTTATCATAACATCCTATCAGTCGTGTTTTTTGAGTAGTTGACATTTTTCGTACAAAATAGCAGTACATAGAAATTCAACCCATTAAAATTATGCTAATCACAACTTGATATGATAAAATTGTTAATTTTACAGTCAGTATCTTCAAAATTATATCATTAGTTGACATTTTTATACAGTAGTGAAGAAATTAAAACCTAAATTCTTTTGAGATTTTGTATAACTTATTTACGAAAACTTGTAGAAGCATTAAATGCCAGTAAAATACAAGCGAGTGGCGACTCGTTTGTTGGGATTTAGCAGGGTCAAGTCCCGAGATTGAGCATGACTTCCTAATTTGGGGAACACATGATAACATGGAACTGGGATTTGGTTATAAACGTTTGCTATTAATAACATTGAATTTAATTTATCTTATGAAACAAGTTGGTTGTGTTGGTACACCTTTAAGGTTTCACTATAGTGAAAATCATAAAAAATGTGGATTAATAGAATGTAAAAGCAGTGTCTAATTTGTTGTGATTAATATGTCTGTTTGGATATCAGGTAATTGGTTTGAGAGATGTTATTCCTCCACCATTGCGTAGAGAGTTTAATGATGTCTACATAGCGATGGAACTCATGGATACTGATCTTCATCATATCATTCGCTCTAATCAAAGTCTTTCGGAGGAGCACTGCCAAGTGAGTGCTCTCAAGCTGTTGTTTTTTAATTTCTATGTATCATGATTACTATGTTTTCAAATTGGAACCTTTTGTTTTTCTGATGATTGGATGCTCTTGTACTTGCAGTACTTTTTGTATCAGATTCTCCGTGGGCTAAAGTATATACATTCTGCAAACATAATCCACAGAGATTTAAAACCGAGCAACCTGTTGTTGAATTCTAATTGCGACTTGAAGATTATTGACTTTGGTCTTGCCCGACCAACTATGGAAAGTGACTTCATGACAGAATACGTAGTCACAAGATGGTATAGGGCTCCCGAATTATTGTTGAACTCCTCAGATTACACCTCTGCGATAGATGTGTGGTCTGTTGGTTGCATCTTCATGGAGCTTATGAATAAAAAACCTCTCTTTCCAGGCAAAGACCATGTGCATCAGATGCGCCTATTGACAGAGGTGAGATTGAAAAAACAAGAAAAGACAATGACCTAAAAAATTGCATAAAATGCTTGCCGTAGGCTCTCTTGAAATTCGAGGATGACATGTTTCAAATTATTTAATACCATGGATAATATAGTCAGTAGTTCAATTTTAAAAATTAATTTTATTTCCATGCTTACGCTTCTTGTCTTATCCACAGCTTCTTGGCACCCCAACTGATGCTGACCTTGGGTTAGTAAAAAATGAAGACGCAAGAAGATATATTAGACAGCTTCCTCAATATCCTCGCCAACCTTTAGCTCAGGTCTTCCCCCATGTTCATCCCGCAGCCATTGATCTTGTTGATAAAATGTTGACAATTGATCCCACCAAAAGAATTACAGGTACCTTTCCCATTCCTGTCATATTTTTTTTTATTTATAATTTTGTATCTGGATGAAGCTACATGTAGGTTCATTTTGAACATTGATGATATATGCAAACCTACATATTGAATGAAAATGGGCAATTTTTTTTATATATTTCTGTTTAAATATTGGCAGTTGAAGAAGCGCTAGCCCATCCATACCTTGAAAAACTGCATGATGTAGCTGATGAACCAATCTGCATGGAGCCATTCTCTTTTGAGTTTGAGCAACAACCATTGGATGAAGAGCAAATAAAAGAGATGATATACAGGGAAGCATTAGCACTCAATCCTGAGCATGCTTAAAGCAGAAAGACTCAATCAAGGACTTGTAAGTTGTATCTTTAGAAGGAAAAATAAAAAAAAATCTTCATTTTTTAATCACTAAGTTCGCTCCTTACAAGCAGGAAAGTATCAAGTATTTCAATCTTGTTCCCAGCCAAGCTCCTTAGGTATTTTATTCAATCAGTGTGACTAGTTAGGTGCAACTACGTCTTGGTGAGTGCCCTTTTGTTGTAAAGTGCCATGCAACGATATTAGGCTCCACAATTTTTTTTTTAACCCTGATGGGTTATTTATTATTTTATTTTCTTTTGGGCTTGGGTTACTCATCATGTATCCTGCCTAAGTTATTTGCATTGTAACTTCTTGTATCTTAGTTTTATCTATTTTCTGCTATATTATATGTATAGTGGATTTGAATTC