Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_12631 LG3 19005511 19008252 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   embryo development ending in seed dormancy, lateral root formation, root development, regulation of asymmetric cell division, embryo development ending in seed dormancy, lateral root formation, root development, embryo development ending in seed dormancy, embryo development ending in seed dormancy, lateral root formation, root cap development, root development, embryo development ending in seed dormancy, root cap development, root development
Cellular Component   located in   endocytic vesicle, plasma membrane, cell surface, endocytic vesicle
Molecular Function   enables   protein homodimerization activity, protein binding, transmembrane receptor protein kinase activity, transmembrane receptor protein kinase activity, protein serine/threonine kinase activity, protein binding, transmembrane receptor protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, transmembrane receptor protein kinase activity, kinase activity
SNP Position Effect Amino acid change
C/A 19005844 synonymous_variant p.Pro803Pro
A/T 19005880 synonymous_variant p.Leu791Leu
G/A 19005919 synonymous_variant p.Pro778Pro
T/A 19005924 stop_gained p.Arg777*
C/G 19005925 missense_variant p.Glu776Asp
C/G 19005927 missense_variant p.Glu776Gln
G/A 19005978 synonymous_variant p.Leu759Leu
G/T 19006465 synonymous_variant p.Ser596Ser
T/A 19006688 missense_variant p.Lys522Met
G/T 19006813 synonymous_variant p.Ser480Ser
A/G 19006815 missense_variant p.Ser480Pro
G/A 19006844 missense_variant p.Ser470Leu
G/A 19007370 missense_variant p.Pro295Ser
T/C 19007381 missense_variant p.Lys291Arg
T/A 19007476 synonymous_variant p.Pro259Pro
T/G 19007974 synonymous_variant p.Val93Val
A/T 19008095 missense_variant p.Phe53Tyr
C/T 19008099 missense_variant p.Val52Met

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_12631.1
MGISLKRQLLNGNPCSFRLLFELVVLSYLWLQVTSLGSMSSIAISYGEKGSVFCGLKSDGSHTVTCYGGNSAIIYGTPAQFSFVGLTAGDGFVCGLLMGSNQPYCWGSSAYIEMGVPQPIIGGAQYLEISAGDYHVCGLRKPLTGKHRYISLVDCWGYNMTKNYVFGGQIESITAGSEFNCGLFSQNRTVFCWGDETNSLVISLIPQDKRFQKISAGGYHVCGILEGVNSRTVCWGRSLNLGEEISVAHAGQGNVDLAPNDPMLSVVGGKFHACGIKSYDRGVICWGFIIKRSTPSPRGIKVFEVAAGDYFTCAVLADKYLMPSCWGVDFPTSLPLAVSPGMCQPAPCPPGSYAINQRKGLCKSPDSRVCMRCSGACPPEMYQKSACNLASDRLCEYNCASCSSSQCFTNCSSSYSNASTEKKTEKFWALQLPVVIAEIAFAVFIVSVVSITAILYVRYRLRDCECSKGSKGKKLNGSSSLQNENKVRPDIEELKIRRAQMFTYEELESATCGFKEESIVGKGSFSCVFKGVLKDGTVVAVKRAIVSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGTNQVLREQLNWIRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSGSPLAELPAGTFGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDITEILDPVLKPPPDVEALKRISNVACKCVRMRGKERPSMDKVTTALERGLAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQISSNRSVSETDVVEHEEQRIEFRAPSWITFPSVTSSQRRKSSVSEVDVDGKNNAEGKNLSNVGGGGDVLRSLDEEIGPASPGERMFLQHNF*


CDS Sequence:
>Vu_12631.1
ATGGGGATCTCGCTAAAGCGTCAGTTGTTGAACGGGAATCCATGTTCATTTAGGCTTCTGTTTGAGCTGGTGGTTTTATCGTACTTGTGGTTACAAGTAACAAGCCTTGGTTCCATGTCATCCATTGCCATCTCTTACGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGAGGCAATTCAGCCATAATCTATGGAACACCAGCCCAGTTTTCATTTGTTGGTCTAACAGCTGGAGACGGCTTTGTATGTGGGCTTCTGATGGGTTCGAATCAACCGTACTGCTGGGGTAGCAGTGCCTACATTGAAATGGGAGTGCCACAACCTATTATCGGAGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGACTGGAAAACACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATGTGTTTGGGGGACAGATTGAATCAATCACAGCTGGTTCCGAATTCAATTGTGGTCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTGGTGATTAGTTTGATTCCACAAGACAAGAGATTCCAGAAAATTTCAGCCGGTGGGTATCATGTGTGTGGAATCTTAGAGGGAGTGAATTCCAGGACTGTTTGTTGGGGGAGAAGCTTGAACCTTGGGGAAGAAATTTCTGTGGCACATGCAGGTCAAGGAAACGTTGATTTGGCTCCAAATGATCCCATGCTTTCTGTAGTGGGAGGGAAGTTCCATGCATGTGGGATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCCGGTGATTACTTTACTTGTGCAGTTCTTGCTGACAAATATCTTATGCCTTCATGTTGGGGAGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCAGGAATGTGTCAACCTGCTCCATGCCCTCCTGGTTCATATGCCATTAATCAGCGTAAAGGTCTCTGCAAATCACCAGATTCTCGTGTTTGCATGAGATGCAGCGGTGCTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGCAATTTGGCTTCTGATAGACTGTGTGAATATAACTGTGCCTCTTGTTCTTCATCCCAATGCTTCACGAACTGCTCCTCTTCATACTCCAATGCTTCCACTGAGAAGAAAACTGAAAAATTCTGGGCTTTACAGTTGCCAGTTGTAATTGCCGAGATTGCTTTCGCGGTTTTCATAGTCAGTGTGGTGTCAATAACTGCAATTTTATACGTCCGCTACCGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAAAGGGGAAGAAACTCAACGGGAGTTCATCCCTGCAAAACGAGAATAAGGTGAGGCCAGACATTGAGGAGTTAAAGATCAGAAGGGCTCAAATGTTCACCTATGAGGAACTAGAAAGTGCAACTTGTGGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCTTGTGTGTTCAAGGGAGTGCTGAAAGATGGGACAGTTGTTGCTGTAAAAAGGGCAATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGGTTGAACCACGCTCATTTGCTCAACCTACTAGGCTATTGTGAAGAAGGTGGAGAGAGACTTCTTGTGTACGAGTTCATGGCTCATGGCTCCTTGCACCAACACTTGCATGGGACAAACCAAGTGTTGAGAGAACAGTTAAATTGGATAAGAAGAGTGACTATTGCAGTGCAAGCAGCACGTGGAATTGAATATTTGCATGGCTATGCTTGCCCTCCTGTGATTCACAGAGACATAAAGTCCTCAAACATTCTGATTGATGAAGAACACAATGCAAGAGTGGCTGACTTTGGTTTATCATTGTTAGGTCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTTTTGGCTATCTTGATCCTGAATACTACAGGCTTCATTACCTCACAACCAAATCAGATGTGTATAGTTTTGGTGTTCTTCTTTTGGAGATTCTGAGTGGTAGAAAAGCCATAGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATAAAATCAGGAGATATAACTGAAATTTTGGACCCAGTTTTGAAACCCCCTCCTGATGTAGAAGCCCTGAAGAGAATATCCAATGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCCTCAATGGACAAAGTGACAACAGCTTTGGAGAGAGGTCTTGCACAGTTGATGGGTAGTCCATGCATTGAGCAGCCGATTTTGCCAACCGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAATATCCTCAAACAGGTCAGTTTCTGAGACTGATGTGGTAGAACATGAGGAACAAAGGATTGAGTTCAGGGCACCCTCATGGATTACCTTCCCCAGTGTGACATCTTCTCAGAGGAGAAAGTCATCAGTGTCTGAGGTAGATGTTGATGGGAAGAATAATGCAGAAGGTAAGAACTTGAGCAATGTTGGAGGTGGTGGTGATGTTTTGAGAAGCCTTGATGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGGATGTTCTTGCAACACAACTTCTAA


Promoter Sequence:
>Vu_12631::LG3:19008252-19010252(-)
GGGTATTAGTATTTGTTTAAATGATATACAAATTTAAAACCACTGAAATTAATGAAGAGTACTAGTATCTCAACATGTCAAATACATTCATTTTACAAGATATTATTTCATTAATTTATAAATTTATTTTACAAGATATTATTTTATTAATTTATAAATTTATTTTACAAGATATTATTTCATTAATTTATAAAATGATACAATGAGATTGACTGAATAAAGTCATTATTAAAATCCATAACTTATAATTTGAGTGCTAATAATAGTGTGAAAGTATTATTCATCAATGAAATGCATAAAAAAGTTCATAATAACAATAATGAATATAAAAAAGTTCATAATAACAATAATGAATATAAAAATGTTCAGAATAACAATAGTGAATATTCCATATGTAAATTTTCACAAAATGTGAAAAAAATATATTAAGAAAAACAATTTTACCGACAATAACGAATATAATATGTAAAAGAATATGTATAAATATGATGCCTAGAAATTTTAATTCTGAAAAGTTTTGAAACTAATCCAACTAACATGTTTTAATGATTAATGTACACTATATTTGACATCGAAGGAATTTAAGTGTTGATTAAATTGATCTAAAATATTAAAAATATCACTGAAGTACTTCATTAATTTAAGACCCTCAAATTGATGTCTATTTAAAGTGTTCATTTATGAACATACAAATAAATACTTAATACTTTCTATATTTTCAGCTTTCCTCACATCGCATTACAAATCACATCCATAACATGTATTACTTTTCTCTATATTTTATTAGAAAAATTGAATGAACTGAATTTAAGAGATTCATGTGTAGACAATTCTCCATTATCAAGTTCTCACAAGAAAAACATAAATCGAACTTCTATCCTCGTAAAACGAGTTTGTCAAATTACCAAGTAGACTAAACTTCAGCACACAGAAAAAAAAAAACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAAAATAGAAAGCCGATGAAGCAGACAAAGAGGAAGTGAAAGAAAATGAAGCAACCTGTACAGAGAGGAACTTGTTGAGCAGGAAAGTGAGAGAAAGAATGGAAGTAGAAAATGAATGGTTTGAGGTGTGATGTGGTGTTTTGTATCGTTCGAAGTTGGAAGCCATTAGCCACACTTGATGAGCAAAGTAAGATTTGGAAGTGGTGGCCAAAAATGGAGTAGTCCAAGCATGAAAACATTGAATTGCATTAACTTTATCATTTATTAGCTTCACCAACACTTTGCCCATACGAATACAAGGAGCAGTTTTCTGTCATTTAATGCACCGTCTCTCCCCCACCCTCTTGTCTGCAACAACAACAATACCCTGCAACCATCCTCAGCAATCTATCTACATCTCCTTCACTTTCACTTCCTCTTCCCATCTCCAACACCCCATGCTCCAAAATGCATTGCAAAAACGCTTTTCACAATGTGGGCTGGCCACCTCATTCAAGCACCTTGTTGATGCAGTGATTTAAGAGTCTCTTTCGTCATGAAAACAGTTGGATTTGTTGCAGCCTTTTATGCAATCTTTTTGTCTTTCTCACCTAGCCAACAAGAAGTATGGGATTTTCTTTCCTATGCATTGGAAATGGCAGAACAGTTTCGTTCCTATCTATTTGCCATGGCTTAAATGAAGAAGATTCTCAATTTGCTTTCTTGTTTCACCTTCACCACTCCTTTTTCTTGCATTGCTAGTTATTCATAGAGTCTGTACGAAATAGTGAGGTAATGGTGTTATCATGGGGTTTTAGTTAACAAGATGAGGTTTGCAAGATTTGTTTTTCCCTCTAGACTGCATTAGCCTTACCTAATAGTTTTCTCTCTGGGAAGTGAATGGAAGCAAAGCTATATACTTTGATCAAACAATTTTGTTATTAAGCATTCTACATTCTGCATTTTTATCTGGGTAATGTTTTGGTTTCTTTGTATT


Gene Sequence:
>Vu_12631(-)
ATGGGGATCTCGCTAAAGCGTCAGTTGTTGAACGGGAATCCATGTTCATTTAGGCTTCTGTTTGAGCTGGTGGTTTTATCGTACTTGTGGTTACAAGTAACAAGCCTTGGTTCCATGTCATCCATTGCCATCTCTTACGGCGAAAAGGGTTCTGTGTTTTGTGGTTTGAAATCTGATGGCTCTCACACAGTGACATGTTATGGAGGCAATTCAGCCATAATCTATGGAACACCAGCCCAGTTTTCATTTGTTGGTCTAACAGCTGGAGACGGCTTTGTATGTGGGCTTCTGATGGGTTCGAATCAACCGTACTGCTGGGGTAGCAGTGCCTACATTGAAATGGGAGTGCCACAACCTATTATCGGAGGAGCACAGTACCTAGAAATCAGTGCTGGTGATTACCATGTTTGTGGCTTGAGGAAACCTTTGACTGGAAAACACAGGTACATTTCCTTGGTTGATTGCTGGGGCTACAACATGACCAAAAACTATGTGTTTGGGGGACAGATTGAATCAATCACAGCTGGTTCCGAATTCAATTGTGGTCTTTTTTCTCAGAACAGGACTGTGTTCTGCTGGGGTGATGAGACTAATAGCCTGGTGATTAGTTTGATTCCACAAGACAAGAGATTCCAGAAAATTTCAGCCGGTGGGTATCATGTGTGTGGAATCTTAGAGGGAGTGAATTCCAGGACTGTTTGTTGGGGGAGAAGCTTGAACCTTGGGGAAGAAATTTCTGTGGCACATGCAGGTCAAGGAAACGTTGATTTGGCTCCAAATGATCCCATGCTTTCTGTAGTGGGAGGGAAGTTCCATGCATGTGGGATTAAGAGCTATGATCGTGGAGTGATTTGTTGGGGCTTTATCATCAAACGAAGCACTCCATCTCCTAGAGGGATTAAGGTTTTTGAAGTTGCAGCCGGTGATTACTTTACTTGTGCAGTTCTTGCTGACAAATATCTTATGCCTTCATGTTGGGGAGTTGATTTTCCCACCTCACTTCCTTTAGCTGTTTCACCAGGAATGTGTCAACCTGCTCCATGCCCTCCTGGTTCATATGCCATTAATCAGCGTAAAGGTCTCTGCAAATCACCAGATTCTCGTGTTTGCATGAGATGCAGCGGTGCTTGTCCTCCTGAAATGTATCAGAAGAGTGCATGCAATTTGGCTTCTGATAGACTGTGTGAATATAACTGTGCCTCTTGTTCTTCATCCCAATGCTTCACGAACTGCTCCTCTTCATACTCCAATGCTTCCACTGAGAAGAAAACTGAAAAATTCTGGGCTTTACAGTTGCCAGTTGTAATTGCCGAGATTGCTTTCGCGGTTTTCATAGTCAGTGTGGTGTCAATAACTGCAATTTTATACGTCCGCTACCGGCTAAGAGATTGTGAGTGTTCAAAAGGGTCAAAGGGGAAGAAACTCAACGGGAGTTCATCCCTGCAAAACGAGAATAAGGTGAGGCCAGACATTGAGGAGTTAAAGATCAGAAGGGCTCAAATGTTCACCTATGAGGAACTAGAAAGTGCAACTTGTGGATTCAAGGAAGAGTCCATAGTGGGGAAGGGGAGTTTCTCTTGTGTGTTCAAGGGAGTGCTGAAAGATGGGACAGTTGTTGCTGTAAAAAGGGCAATAGTGTCTCCCAACATGCAGAAGAATTCCAAGGAGTTTCACACTGAACTTGACTTGCTCTCAAGGTTGAACCACGCTCATTTGCTCAACCTACTAGGCTATTGTGAAGAAGGTGGAGAGAGACTTCTTGTGTACGAGTTCATGGCTCATGGCTCCTTGCACCAACACTTGCATGGGACAAACCAAGTGTTGAGAGAACAGTTAAATTGGATAAGAAGAGTGACTATTGCAGTGCAAGCAGCACGTGGAATTGAATATTTGCATGGCTATGCTTGCCCTCCTGTGATTCACAGAGACATAAAGTCCTCAAACATTCTGATTGATGAAGAACACAATGCAAGAGTGGCTGACTTTGGTTTATCATTGTTAGGTCCTGCAGATAGTGGTTCACCACTGGCTGAACTCCCAGCTGGGACTTTTGGCTATCTTGATCCTGAATACTACAGGCTTCATTACCTCACAACCAAATCAGATGTGTATAGTTTTGGTGTTCTTCTTTTGGAGATTCTGAGTGGTAGAAAAGCCATAGACATGCAATATGAAGAAGGGAACATAGTGGAATGGGCAGTGCCTCTTATAAAATCAGGAGATATAACTGAAATTTTGGACCCAGTTTTGAAACCCCCTCCTGATGTAGAAGCCCTGAAGAGAATATCCAATGTGGCTTGTAAGTGTGTGAGGATGAGAGGGAAAGAGAGACCCTCAATGGACAAAGTGACAACAGCTTTGGAGAGAGGTCTTGCACAGTTGATGGGTAGTCCATGCATTGAGCAGCCGATTTTGCCAACCGAGGTGGTTTTGGGAAGCAACAGATTGCACAAGAAATCATCTCAAATATCCTCAAACAGGTCAGTTTCTGAGACTGATGTGGTAGAACATGAGGAACAAAGGATTGAGTTCAGGGCACCCTCATGGATTACCTTCCCCAGTGTGACATCTTCTCAGAGGAGAAAGTCATCAGTGTCTGAGGTAGATGTTGATGGGAAGAATAATGCAGAAGGTAAGAACTTGAGCAATGTTGGAGGTGGTGGTGATGTTTTGAGAAGCCTTGATGAAGAGATTGGTCCTGCTTCTCCAGGAGAGAGGATGTTCTTGCAACACAACTTCTAA