Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_13611 LG3 31633197 31638362 PREDICTED: probable receptor-like protein kinase At3g55450
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to chitin, protein localization to organelle, response to salt stress, organic substance catabolic process, protein phosphorylation, defense response to bacterium, protein phosphorylation, regulation of signal transduction, response to oxidative stress, response to hypoxia, defense response to fungus, secondary metabolic process, cellular catabolic process, response to auxin, cellular response to oxygen-containing compound, cellular catabolic process, organic substance catabolic process, cellular response to oxygen-containing compound, defense response to fungus, response to auxin, carboxylic acid metabolic process, defense response to fungus, shoot system development, defense response to bacterium, regulation of signal transduction, response to salt stress, hormone-mediated signaling pathway, response to salicylic acid, response to alcohol, shoot system development, hormone-mediated signaling pathway, response to lipid, protein phosphorylation, regulation of signal transduction, defense response to bacterium, phosphorylation, phosphorylation, regulation of defense response, carboxylic acid metabolic process, hormone-mediated signaling pathway, response to hypoxia, cellular catabolic process, hormone-mediated signaling pathway
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein kinase activity, ATP binding, ATP binding, protein kinase activity, protein kinase activity
SNP Position Effect Amino acid change
C/A 31633310 5_prime_UTR_variant
A/T 31633375 5_prime_UTR_variant
C/T 31633383 5_prime_UTR_variant
G/A 31633385 5_prime_UTR_variant
T/C 31633387 5_prime_UTR_variant
G/A 31633436 5_prime_UTR_variant
G/A 31633439 5_prime_UTR_variant
G/A 31633459 splice_region_variant&intron_variant
G/A 31633462 splice_region_variant&intron_variant
C/G 31634180 intron_variant
A/G 31634346 intron_variant
G/A 31634374 intron_variant
T/A 31634375 intron_variant
A/G 31634377 intron_variant
C/G 31634426 intron_variant
G/T 31634552 intron_variant
G/A 31634596 intron_variant
A/C 31634653 intron_variant
T/A 31634886 upstream_gene_variant
A/T 31634948 upstream_gene_variant
G/T 31635151 upstream_gene_variant
A/T 31635269 initiator_codon_variant p.Met1?
C/G 31635495 missense_variant p.Thr76Ser
T/A 31635496 synonymous_variant p.Thr76Thr
C/G 31635497 missense_variant p.Leu77Val
A/T 31635544 missense_variant p.Glu92Asp
C/T 31635899 splice_region_variant&intron_variant
T/A 31636046 upstream_gene_variant
A/T 31636173 upstream_gene_variant
G/A 31636568 missense_variant p.Asp257Asn
T/A 31636745 upstream_gene_variant
G/A 31637053 upstream_gene_variant
T/G 31637186 upstream_gene_variant
A/T 31637275 missense_variant p.Glu300Val
A/T 31637677 missense_variant p.Ser388Cys
T/C 31637829 synonymous_variant p.Thr438Thr

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_13611.1
MGCFTVLKSKKKKSDPITYVKRVSHNEHVPTVLPEPQTRTRSLQSAPPSFKTRVKPIQPISKVNSNRTRTLSAPSTLDAAEQDALVSIEYEEQEESKHRAGSMKERSSSPQPLPLPSPQGGAVLKAIGSFKSVTASGPLSASGPLPLPPTGSLRNFLYDEIATACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHARESSEHRMLVYERLYHGSLDRLLYGRSDGPLIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVEHLKMIQDLKYSCRFPLQEPASNSGKHMSRSPSLNGIICPVPRLNFSPSPPSGVPAIAVSPPRWSGGVPLLPPRACSSSLSLEELDRQESRKSSSSASRRASVEGF*


CDS Sequence:
>Vu_13611.1
ATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCCGATTACATATGTTAAACGTGTAAGCCATAATGAGCATGTGCCTACAGTGCTGCCTGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAAGACCAGAGTGAAACCCATTCAACCCATTAGTAAAGTCAATAGCAACAGAACAAGAACATTATCTGCCCCATCAACTCTTGATGCCGCAGAACAAGATGCTTTGGTCTCAATTGAGTATGAGGAACAAGAAGAGTCTAAACACCGAGCTGGATCAATGAAGGAGCGTTCATCTAGCCCACAACCCTTACCACTCCCATCCCCACAGGGTGGTGCTGTATTGAAGGCTATTGGCAGCTTTAAGTCAGTTACAGCTAGTGGTCCTCTATCTGCTTCTGGACCTTTGCCACTTCCACCTACCGGGTCACTTCGGAATTTTCTGTATGATGAAATTGCCACTGCATGTCACAATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCATCCACCATATATAAGGCTTCTTTTGGTGATGATGTTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACACGACTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAACACTCTTGCATCCTTGCAACATCCGAACCTCTGTAAATTGCTAGGATTTCATGCTCGAGAGAGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTGTTGTATGGGAGATCTGATGGGCCATTAATAGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTTTAACTTTCTTGCATGAAGAAGGGCCATTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCGGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACCCCAAAGAGCAACGTATGGAGCTTTGGAATATTTCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCAAAGGAAGAGAGGAATTTAGTGAAGTGGAGCCGGCCCTTCCTAGCCGACAACTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAGGGTCGATTTCCTTCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAGAGACCTACCATGAGAACTGTTGTTGAGCATCTGAAGATGATACAGGATTTGAAATACTCATGCAGGTTCCCTCTGCAAGAGCCAGCATCGAACTCTGGAAAACATATGTCAAGATCACCAAGTCTGAATGGCATCATCTGCCCAGTACCAAGGTTGAATTTCTCACCATCACCACCATCTGGGGTTCCAGCAATAGCTGTTTCACCTCCAAGATGGTCTGGTGGAGTGCCCCTTCTACCACCTCGTGCATGTTCTTCCAGTCTCTCTCTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA


Promoter Sequence:
>Vu_13611::LG3:31631197-31633197(+)
TTGAATTTTCTTTACGTCTATTTGTTAACATGTTTATACTAATTAAATAATTAATTTATTTTAATAGTAACCAATCTATTTTCTCATTGCATTATTATCATCTATACATATAACACAATTTTAATCCAAATCAAGACGTGCTTTTGTAAAAAATGACCTAGTTTGGTTTTATTTATTTCCTATCACTATTACAATATAAACACCATACATCGGTTTTATATGAATAACATTCTCTTTTTATTATTCTCACACTTTCTTAGTTTTTATGCATAACGACCCCAAGTAATTGTTTTTAACAAAAAAAAGTCTTAAAAAACCTGAGTTGGTATGTAAGATATAAAAGTTATATTTAAATGATATTGATTGACTATTTTTTGTTATTTGCATTATTTTTCTATTATTTTAAATTAAATTTAGATGTTATATTTTAAAATTAAAATAAATGATATTTAACTTTTACAAGAGTTAAATATTTTAATTGGAACTCATTAATTTGTTTTATTTATTATTTTCCTTTTAAGGTGGTCAAACGTTGGTCCATTTTTCCCGATAACACGAAACAACAAAAGGCTAGTTGTTGAGTTGAGCACTTGAGCGTCCGAGTGGGACCCACATCTCTATTTGATAATTGAAATGAATCAGAAAATCGATGCCACGCGTACTTGGCGCGTGGAAAGACAAACATGTTGATGTCAGGTGGGACCCACGGGACCTTCTCCACCGTTGCTCCGAGTGCTGCGTTCGAATCGGACGGCCAAAATACGGAGTCAAAGACCTATCATGATGGCTCTCTTTGACCAACACATGCCCTTTTTAAATTATTGTTAGAAAATGAAATTTAAAAACTTCGCTACTTTGACCGGGCTGTCACCCTCAATCAAGATGAACTTCGTTGAAAGTCGTGGAGCACTCCGAAAGTACGAAATTGCCCATGGGCCCACCTTTTCTATTTATTTTTTGTTTCAACTTTTTTCGTTAGGGTTTGAAAATGGAAAAACCCAACAGATCCCTTGGTCCACCACAAAGATTATTCTTTAGCAAAATAAGAACTTTAATTACTCTGAAGAAAAAAACAACATAATTTTCATGATTGTATTTCTCAAACAACGAGTTTGTAATTAAATAAAATATTTTGAATTAAATTATTTATAATATTAATTAAATGCTATATATATATATATATATAGGTTTTTCATAAATATATTTTCGTGTGTTTGAAATATGGTCAAACATTACATAATGAAATTTAATTATTTACTTTTTCTAAGTTTAACTTTAATGCTCTTAAACTCAAATAAATGGTTGAGTGAAAACTTAAATAGATGGAGATACCAAAAATTGAATTCATGGTTCAGTTAAAAGTAAATAACTGGACCTAAAACTTTAAAATGTTTGTTAAAGACAAAAAAGAAGTTAGATTTTTTAGTTGAAATCAGGACCTTTAGAAAAGGAAAATATATGTTTAGCATTTTAATAGAAGAAACTTTCATTTTGTAGAAGTTGAATAAATGGAGATTAAAAAAATGATACAATTTAATTTGATGAATACTATTAGTGATGAAATTAAAGTTGTATACTGAAAATGAAAGTGAAACTTGCGTTGTTTGGTAGAATTAATAGTTTATACGAAAAGGAAACTTCCCTTTAAAGTGGCTACATTGAAAGGAAGAAGTTATGGAAACATATTTTTTAATATGTCTATAAATGCATCGTTAGAACCTATCAAAATATGGGCGGTCAAAGCAAGAATTGTTAAAAAAAGTCGAATTAATCAAAGTTCAAACCAAAATTCAAAACCATCTAATGGTAGTTTGCAAGGAAGGGACATAAAAGGTAATTTCTGAGGGCAAAAAATAGAAGGAATTAAAAATTGAAGAAAAAAAAAGAGAGTGGCAAAGTTGGAAAAAAAGGGAAAAAGGAAAAACACATCTTTTGTTTGTGTTTAATGAAAATATTATTTTAATGAGTTAATTAAATCTGGTTTTGGTTAGGTTTGACCA


Gene Sequence:
>Vu_13611(+)
ACTGCTCATTGGGTTCCAATTTTTCTATCTTTTTCTCTCTCTACAATTCTAAATATTCCTCTAATCTCTTTCTCTCTCCTCTACTTTTCCCTCTCTCTCTACAATCTTCACTTCTCAGCTTTTCCAATCTTCTTTCTTTGACTGGACAAGGGGGTTTTCGTCGACGAATCAAAACCACAAAAAGTTCCGATTTTTACCCATTTCGCTGCCCCTGGATCGCTTCACTCTGAGTTGCATGAGCTGCCATTTCTCGCAAAGGTTCGTTGAATTTTCATTCTTTGGTTTCGATTCGAGTAATTTCGCCGTTTTCTGATGAAACTTTGCTTCGGAGTTTCATTTTTTGCTGTTTTTTTTATCTGGGTTTTTTTTTTTGTACTTTGATTTATACGTTAGTTTGTTGTTCATTTTCTTCTTGATTTTTCTATTTTTGTTTTATTTGGAAAATTTGTTGGAGGAGATCAAACTTAGCGGCTTGGATTTTTTTTACCTTGATATTGTGGAAAGAAATGGGATAAATGGGTTTGTCTGATTCTTTTTTTTTTTGTGTTATGGATCTGAATTGCTTTTCACTTAGTTGAATAGATGGAGCTTGTTAGTATTTTGCAATTGGGTAGTTCTGTTTATTTAATGGAGCATTTGGTCTATTTACATTTTTGTTTCTTCAGCACTTCTGAAAATTGGGGAGTGAGATGGGGGAAAATTTAAGTAATTTTACCATATACTATTTTATGGAAATGTGATGGACACAAGTTAGATGTAAGGCTTATAAGGTGAGGGGTTAACAGATTGGTGATTAATTGTAGTGTTTCGCTTTCAATTTATGGTGGTTGGTGCGTATGTGATTGTGGTAGTCTTAAGAATAGGTGACTCTTAGGAGTAGGGAATGAAAAGAGAAATGAAAATGAAAATCAGGAGTAAAGTTAAAGCATGTTTTATTGTCTTAAGATGTTGTCACTGGAAAAATAGAATTCAGAAAATTTAAACAGTGAATAGCTATTTTGGTGCATTAATGATTCTCAATGTGTATATATCTCTGAAGTATCCGATCCGGTCCCCTGACCAAAGATCGCCATTCTAGGACCAAATTGATGTTTCCAAATTTTTTTGAGGGTCAAATTTGATGTGAAACGTTGATACACAGATATTAGTAGTAATGGTAGTTGGAATCGCTTGAGTTGTGATTCGATCATGGTAGTTGGAATCACGTGAGCTGTGTTTCAATCCGAGTCCTCACTTCATTGATACAGATCACATGGACTTTCCTTATGTTACTGAAATTTCCTACCAATTGCTGGAACGATAGGACTATCAAATTTTCTGTGTTTTCAATGGTGTGAATCTCTAAGGGACATGGCGCCATGACTTTCCTTATGTTACTGGATGAAGGTATGGTGTGTGGGTGGGACCAGATTCTCGTCGGTGCAGAGGCTTGCGAGATGTCTTCCAAAGTAGCTCTAAGTCATGCTCAGATGCAAGGGTGCAGTGGACCAATGATCAGAGGGTATGGGCCCTGTGGGTGATCCATTGATGACAAATCTCTGATGGGAGAATGCTTTCACATTGACAATTTGGGTGGGGGAGTGGATTAGATATGAATAATACAAAGTATCTGAGGACAGAGAGTCAGAGTACTTTCTGAAAATAAATTATTGTTTGTAATGCAGTTAGCCAGTTTCTAGCAATTAATGTTGATGGAGATAGAATTATGAAAAGAATCCTATAATTAATGTACATAGAAAATGAATACAAATATTGATAGTTTTATTATGTGATAATGTTTTTTGTTATTTTTTAATTATTAGAATATGATGATTATTCATGAACCTTACGATCATGACAGGTTCTGTTTCATGATTTGATAGCCATGGTTAGGCATAAATTAGGAGAAAAATATGACAAACAAATGCTTCATCATTTTCCCTTTCTTGTTTCCTTCCAAACGTAACTCTACCAAGGGATCTATATCAATGAGAATTCAAACTCATACTATGTTTTGAAACACCCCATTCTTTTTTATTTTTGTTTTTGCAGGCATAAAGAGTTCTCTACAACAACCAAGTTCTGTAAAAAGAATGGGGTGTTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCCGATTACATATGTTAAACGTGTAAGCCATAATGAGCATGTGCCTACAGTGCTGCCTGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAAGACCAGAGTGAAACCCATTCAACCCATTAGTAAAGTCAATAGCAACAGAACAAGAACATTATCTGCCCCATCAACTCTTGATGCCGCAGAACAAGATGCTTTGGTCTCAATTGAGTATGAGGAACAAGAAGAGTCTAAACACCGAGCTGGATCAATGAAGGAGCGTTCATCTAGCCCACAACCCTTACCACTCCCATCCCCACAGGGTGGTGCTGTATTGAAGGCTATTGGCAGCTTTAAGTCAGTTACAGCTAGTGGTCCTCTATCTGCTTCTGGACCTTTGCCACTTCCACCTACCGGGTCACTTCGGAATTTTCTGTATGATGAAATTGCCACTGCATGTCACAATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCATCCACCATATATAAGGCTTCTTTTGGTGATGATGTTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACACGACTTCACCCATCATCTCAGGTACTTTTCTCCACACTACGGTACTTAAGTTTCATTTATTTAAATTATGTGTGGTGATTGCTGATTGGGTCATATTAATATCGGACACTTCTATCACCTAATATACAGAAATAATGCCTTGTTATCTTAGAATGGACAAAATCCAATGCTTTATGTATTTGAGATATGCTGTAAGCCTTGTATTGTGTTCAGTTGAATTTAACCCATACACACGTCAGAGGAATTAGTATGGACATAAGAGTGATTTCAATAACCTTTTCAATATTTTTTTCCATTTAACTTGTTATTAAACAGGGTCTCATCATAGTTCATCTTGTTATCCTCCTCTTATGTCTCCATACATAAGAGAGTGCTTAACCATAACAAATCAAAGCTTGAAATTGTGAATTACGTATTAAATATCTGCTGATTGAAACTTACTTATCACTTATTGGTAGCATTGTGTTATTTTTGTCTCTCATTTATGGACATTAAAGAATTTTAGTAACCTGAACATTCTAAAGTGGTCTAAAAGTATCTGTCTTCTTTCAGGGCTTGAAGGAATTCATAAATGAAGTTAACACTCTTGCATCCTTGCAACATCCGAACCTCTGTAAATTGCTAGGATTTCATGCTCGAGAGAGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTGTTGTATGGGAGATCTGATGGGCCATTAATAGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTTTAACTTTCTTGCATGAAGAAGGGCCATTTCAGGTACAAAAACAATAATAATAGTCTTATCCTACTAGGCAAGGTTGAATGTGTGTGTGTGTGTGTGTGTTATATACATTGTCATTGGATTCCACTAAACCAAATTCTTAGGAATATTATTCATTCAGGTTTCTTTTAATAGTTTCTTACGATATGCAATATGTTGTACGAGTGTCTCTAGTGTCTTTTTGTGTGTCTCCAAACAATCTTAACTGAATTTCTGTTTTCTTTTTGTCAATATGTGCAGTACAACTATTTTCTTGTATATAATAATTCCACATCTATGCTCTTATTACATGCATCCATCTTGGCATACTACTACTACAACACTTTTTTTGTCCGTTAGAAGTCTAGAATTATCAACATCATAGGCTATAGTTGGTTATATGACATTAAAATAAAACTTCAATTTGGATCATATGTATGTCTTTCCCATTTGCGTGTGGAGTTTAGATTTCATCAAGCTTTTGTTTTTCATAATTTGGAGTAAATGATTTCAAGGATTCTATTATTATTATTATTACAGTTAAGTATACACCAGTTTTTTAATCTTCGCTGACATACTTCTTTCTGTCTGCAGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCGGAGGAAGAGATTTCAAGCAGTTCATCTGTAAGTTCTTCAAGTCATGAGTGTTTTGTGTTGTTCTAACCATCAGAGTTGATTATATTTTTCCATCGTTCTCTACTCATTTTTTTGTGAATATCTGTTGTCATTCGTGATATTCATGAATTTATTTGTTATTATCCAGGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACCCCAAAGAGCAACGTATGGAGCTTTGGAATATTTCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCAAAGGAAGAGAGGAATTTAGTGAAGTGGAGCCGGCCCTTCCTAGCCGACAACTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAGGGTCGATTTCCTTCTAAAGCAGCAAGAACAATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAGAGACCTACCATGAGAACTGTTGTTGAGCATCTGAAGATGATACAGGATTTGAAATACTCATGCAGGTTCCCTCTGCAAGAGCCAGCATCGAACTCTGGAAAACATATGTCAAGATCACCAAGTCTGAATGGCATCATCTGCCCAGTACCAAGGTTGAATTTCTCACCATCACCACCATCTGGGGTTCCAGCAATAGCTGTTTCACCTCCAAGATGGTCTGGTGGAGTGCCCCTTCTACCACCTCGTGCATGTTCTTCCAGTCTCTCTCTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGATTGTGTATAATGTTCATTTTTTATTTATTATTTTTTTTGGTGTGATTCAACACAAATTTATAGGAGATAAAGATGTGGTTCCTCCACCTTTTAATCCCTCAGTGTGATGCCGAGAGGATGTTCTTTTGTAGATAGTGCAAAGGTTGGTTGAGTGGGTTCAATTAGTTACCCCCATTTATATGAAAAATTATATGCTCTTTTACCAT