Genomic Resources - Ricebean Portal

Integrated genomic strategy for accelerating domestication of
ricebean (Vigna umbellata) under genetic enhancement of minor pulse

Gene Details:

Gene ID	Chr. No.	Start Position	End Position	Function	View on
Vu_14250	LG3	45550002	45550538	PREDICTED: zinc finger protein KNUCKLES	Map

Annotations

category	relationship type	keyword
Biological Process	involved in	regulation of transcription, DNA-templated, regulation of flower development, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, floral meristem determinacy, regulation of flower development, regulation of flower development, regulation of flower development, floral meristem determinacy, floral meristem determinacy, regulation of transcription, DNA-templated, regulation of flower development
Cellular Component	located in	nucleus
Molecular Function	enables	DNA-binding transcription factor activity, protein binding, protein binding, DNA binding, transcription cis-regulatory region binding, protein binding, protein binding, transcription cis-regulatory region binding

No SNPs found.

Sequence Details:

Protein Sequence:
>Vu_14250.1

MADPTAMYEFLKQPTNGGVKRPLPPPSTTVNTTTTTTTTAAATTRTFQCHFCHRKFYTSQALGGHQNAHKLERAAARRQTNGLLPPPPLPLEPALKQTEPRPRPMLEPLEPSTGLFFHHPYWLDVEPLQFQTTHPYVTAATLPVPFHAASSTVPQQQQVLSHNVDASDHVNLDLTLRL*

CDS Sequence:
>Vu_14250.1

ATGGCAGACCCAACGGCCATGTATGAGTTCCTGAAGCAGCCCACAAACGGTGGTGTAAAGAGACCACTACCACCACCTTCCACCACCGTCAACACTACCACAACCACCACCACCACCGCTGCAGCCACCACACGCACCTTCCAATGCCATTTCTGCCACCGCAAGTTCTACACCTCGCAAGCCCTCGGCGGCCACCAAAACGCACACAAGCTGGAGCGAGCAGCCGCGAGGAGACAGACCAACGGGCTTCTCCCGCCGCCCCCCCTGCCGCTGGAGCCTGCCCTCAAGCAAACCGAGCCCAGACCCAGGCCCATGTTGGAGCCACTGGAGCCCTCCACCGGGCTCTTCTTCCACCATCCCTACTGGCTGGATGTGGAGCCCCTGCAGTTCCAAACCACTCACCCTTACGTGACCGCCGCTACCCTCCCCGTTCCGTTCCACGCCGCGTCTTCCACCGTACCCCAACAACAACAAGTCCTTTCCCACAATGTCGACGCTTCCGACCACGTGAACCTCGACCTCACTCTCCGCTTGTGA

Promoter Sequence:
>Vu_14250::LG3:45548002-45550002(+)

ATATATATAATCAATTTCAATAATACTGTATAATTTATGTATATTTTGAATATAAAAGTATATAAAATTAAAAGGTTTACTGTATGCATCGCAAATAAAGATACTATTTCCGTTCTACTTTTGGATTGTTTAGTCTTCATTCTATTGTTGACAAGAAGATTGAAAAAAGGGTTATTCTATTTTACTGTTGTAAATAGCATTGTTTTTGTTTGGTTTGGTTTTATTAACTACACAATCATTTAGTTGTACAAAGGGAATAATCAGCGACGTATAAAAAAAACAGAATATACTTCTTAATTAAATAACAGTAGTTTATTCTATAATTTGAAATTACCTAAGAAAAAGTAGACGAGAACATGGAGAGACGCATCGTAATTAATGCATCAGATAACCTACATCTGTGCGTCTTATCTGTGTTTTTTCTGAGTCCTAGCTAGCTAGTTAAAGAAAACGTGACAGCCAAATTTCATATGACCACAGAAACCTGCATGATGCCGTTATTCTATTCATCACGCGATTTCACACCTGGAGAGAGAGAGAGAGAGAGAGTGAGAGAGGGTGCAATTTGGAGGCTGAACATCATAGAACAAACCCATTAGGGTAAGCGAAAGGAACATGAAACGTGAAGGCAGAGGTATCTATAGATGACATATGACCCATATCTCTGAATTGCAGTGAGAGAATGTGGCATGAAACCCACTTTGGCTTGGGAGGAGGAGAGTGATTGAATAATTTCTGCCACTCTGTTTGCACCGCAACACACCACCACACAACACAAACCCTCAATCACTTTGATAATCTAATCAAATGTCCTTGTCATAATCCCTCACCATTCCCCCATACATACGTTCAACAATATTCCTTCTAAGAAAACTTGTTTCAAATATATTTATATAATTGCTTGATTTATCGTTGGGTTTAGTTTAGTGTAATTGGTCTCTCTCATACGTGGCCCCTAGAACGAGCGAGGTGCCTCATGGCCTAACCGTATTGGTGAGGTGTCGAATAATGAGAGGGTGACATATTGAGAGAAAAGCGAGTTGCGGGATGTGTGTATGTGTGTGCGATGTCAGAATCAGACGCAAACACTCTCATCCTAACTGCACTCTCATTCCTCACACCTCCACACACACACACAGAACCAGGCTGCTGCTACTGTAGTGTCTAGTACTACCAGTAAGTGCTCCCACTTCTTGTCCTTTTCTGCATATCACTCACGTCACGTCCTTTGATTCCTCTTACCATTTTATCTTCTTCCCACACTGCCCTCCTTTTCAATATTATATCTCTTTTGTCCCCATCTTTCACACACCAAAAATACCAAAAAACAAACCAACTCTTAACTTTTCGCCCTCCCCGTTTATCTACATTAAGTCCTTAAGTTCCCACACATTCTCCTCTCTCACTCTGCTAACACCCCATTACTTTATAATAAAACCATCTCACTTCACCTTTATCTTCTGCCGTATATACTTTGCAATCCCTTTTTTTTGTTTTCTCCATTCCCCGTAACGTTGCAACTAACATTACCCTGTTAGAAAAGCCATCTTTCGCGGCCATTTTTTGCATCTCAAAACCTCATCACTATCGCCCAAGTATATATATATATATATATATATATATATCTTTGCTTCAACTATTGAACACTCATTTACTACGTGTATTTAGTAGAGGTAAAACCTGTTATCATAAACTTAATCATCATTTTCCCACCATGTTTTATTAAAAAAAAAAAAACTTATTTATAAGGTGGGTCATGGGGAAACATTGTCGGAAGGATATAATCCATAGAGGGTAGGCAAATCGGTCATTTGATATACAAACCAATCGTATTCGCCCAACCCTGAGAAAAGAAGGTTGCTTCACATACAAACCAAAACTTACAACGAGAATAAACCCTTAACCCTTCCACCCTCTCCCTCCTCTTCACATTATATAAACCATTCATACTATTCTCTGTTCACATTGTTCACTCTCACCACCACAGATAAACATTGCAA

Gene Sequence:

>Vu_14250(+)