Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14545 LG3 49299256 49302656 Protein NSP-INTERACTING KINASE 1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, defense response to virus, protein phosphorylation, defense response to virus, defense response to virus
Cellular Component   is active in   plasma membrane
Cellular Component   located in   extracellular region
Molecular Function   enables   protein binding, protein binding, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, protein binding, protein binding, protein binding, protein serine/threonine kinase activity, protein binding, protein binding, identical protein binding, protein binding, kinase activity, protein binding, protein binding, protein binding, protein binding
SNP Position Effect Amino acid change
A/G 49299334 synonymous_variant p.Ser509Ser
A/G 49299337 synonymous_variant p.Leu508Leu
G/A 49299352 synonymous_variant p.Ser503Ser
G/T 49299361 synonymous_variant p.Ser500Ser
T/A 49299367 synonymous_variant p.Ala498Ala
C/T 49299376 synonymous_variant p.Ser495Ser
A/T 49299587 downstream_gene_variant
A/G 49299618 downstream_gene_variant
T/A 49299624 downstream_gene_variant
T/C 49299635 downstream_gene_variant
T/G 49299673 downstream_gene_variant
T/G 49299685 downstream_gene_variant
A/G 49299699 downstream_gene_variant
A/G 49299718 downstream_gene_variant
G/A 49299729 downstream_gene_variant
T/C 49299732 downstream_gene_variant
G/C 49299739 downstream_gene_variant
A/G 49299743 downstream_gene_variant
C/A 49299754 downstream_gene_variant
A/G 49299756 downstream_gene_variant
A/C 49299760 downstream_gene_variant
G/A 49299764 downstream_gene_variant
A/G 49299778 downstream_gene_variant
G/A 49299791 downstream_gene_variant
T/C,* 49299800 downstream_gene_variant
C/T 49299810 downstream_gene_variant
G/A 49299814 downstream_gene_variant
T/C 49299816 downstream_gene_variant
T/C,* 49299830 downstream_gene_variant
G/A 49299834 downstream_gene_variant
T/C 49299840 downstream_gene_variant
A/G 49299861 downstream_gene_variant
T/C 49299862 downstream_gene_variant
T/C 49299863 downstream_gene_variant
C/T 49299874 downstream_gene_variant
T/C 49299888 downstream_gene_variant
C/T 49299890 downstream_gene_variant
G/*,A 49299908 downstream_gene_variant
C/T,* 49299921 downstream_gene_variant
A/*,C 49299987 downstream_gene_variant
G/C 49300008 downstream_gene_variant
C/T 49300019 downstream_gene_variant
A/T 49300046 downstream_gene_variant
T/G 49300061 downstream_gene_variant
C/T 49300071 splice_region_variant&intron_variant
C/T 49300375 downstream_gene_variant
T/A 49300383 downstream_gene_variant
C/A 49300490 downstream_gene_variant
C/T 49300927 downstream_gene_variant
G/A 49301068 synonymous_variant p.Leu246Leu
G/T 49301129 missense_variant&splice_region_variant p.Phe225Leu
A/C 49301724 downstream_gene_variant
G/T 49301786 missense_variant p.Leu169Ile
A/T 49301800 missense_variant p.Leu164His
G/T 49301804 missense_variant p.Pro163Thr
A/G 49301881 downstream_gene_variant
A/C 49301908 downstream_gene_variant
C/A 49301967 stop_lost p.Ter144Leuext*?
G/A 49301974 missense_variant p.Pro142Ser
G/C 49301987 missense_variant p.Phe137Leu
G/C 49301993 synonymous_variant p.Gly135Gly
C/A 49301994 missense_variant p.Gly135Val
C/T 49301996 synonymous_variant p.Pro134Pro
G/T 49302032 missense_variant p.Ser122Arg
G/A 49302057 missense_variant p.Pro114Leu
C/T 49302084 missense_variant p.Arg105Lys
G/A 49302116 downstream_gene_variant
C/G 49302121 downstream_gene_variant
A/G 49302155 downstream_gene_variant
T/A 49302169 synonymous_variant p.Ser100Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14545.1
MERIGEVAFFCLALFFFLSTSVVGLLSPKGVNYEVQALMSIKNSLMDPHSVLSNWDEDAVDPCNWAMVTCSSDHFVTALGIPSQNLSGRLSPSIGSLTNLLTVLLQDNNITGPIPSEISRLQKLQTLDLSDNFFTGQLPDSLSQMKGLHYLRLNNNSLTGPIPSSLANMTQLAFLDISYNNLSGPVPRINAKTFNIVGNPQICAAGVEQNCFRTTSIPLAPNNSQDSQSTKRPKSHKVALAFASSLSCICLLILGLGFLIWWRQRHNKQIFFDVNEQHREEVFLGNLKKFHFRELQLATNNFSSKNMIGKGGFGHVYKGYLQDGTVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTTTERLLVYPYMSNGSVASRLKGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAMLDWVKKIHQEKKIDLLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR*


CDS Sequence:
>Vu_14545.1
ATGGAGAGAATAGGGGAAGTAGCTTTCTTTTGTTTAGCTTTGTTCTTCTTCCTGTCGACTTCAGTGGTTGGTTTGCTTTCTCCCAAAGGTGTCAACTATGAAGTTCAAGCTTTGATGAGCATTAAGAACTCTCTCATGGATCCTCATTCTGTCTTGAGTAACTGGGATGAAGATGCTGTAGATCCTTGCAACTGGGCTATGGTCACATGTTCCTCTGATCATTTTGTCACTGCCCTTGGGATTCCAAGCCAAAATTTATCTGGCCGCCTCTCACCAAGCATAGGCAGTTTAACAAACCTCCTCACTGTGCTTCTGCAGGATAACAATATTACAGGACCAATCCCCTCTGAGATTAGTAGGCTCCAAAAGCTTCAAACTCTTGATCTTTCGGACAATTTCTTCACCGGGCAACTTCCAGATTCCCTTTCCCAAATGAAGGGTCTCCATTACTTGCGGCTAAACAATAACAGTTTGACTGGACCAATTCCTTCCTCTTTGGCTAACATGACTCAACTTGCCTTTCTGGATATCTCTTATAATAACTTGAGTGGACCTGTACCAAGAATAAATGCAAAAACATTCAACATCGTAGGCAATCCTCAGATATGTGCCGCTGGAGTCGAGCAGAACTGCTTCAGGACAACGTCAATTCCTTTGGCTCCCAATAATTCTCAAGATTCCCAATCCACCAAAAGACCAAAGAGTCACAAAGTAGCCTTGGCGTTTGCCTCAAGCTTAAGCTGCATATGCTTACTAATTCTGGGACTTGGCTTCCTCATATGGTGGAGACAAAGGCATAACAAGCAAATATTCTTTGATGTTAATGAACAACACCGTGAAGAGGTTTTTCTTGGAAACCTCAAGAAGTTCCATTTCAGAGAACTTCAGCTTGCTACAAACAACTTCAGCAGCAAGAACATGATTGGCAAAGGTGGTTTTGGACATGTCTACAAAGGGTATCTTCAGGATGGTACAGTTATAGCAGTAAAAAGGCTCAAAGATGGTAACGCTATTGGAGGTGAGATCCAATTCCAGACTGAAGTTGAGATGATCAGCTTAGCCGTCCATCGGAATCTTCTTCGGCTATATGGATTCTGCATGACAACTACAGAGAGGCTCTTGGTTTATCCTTACATGTCAAATGGAAGTGTCGCTTCTCGTCTGAAAGGTCAATCTTCTGAGAAGACAGATGTCTTTGGATTTGGAATTCTTCTTCTTGAACTAATATCTGGCCAAAGAGCACTTGAGTTTGGAAAAGCAGCAAACCAGAAAGGAGCCATGTTAGACTGGGTGAAGAAAATTCATCAAGAGAAGAAAATTGACTTGTTGGTTGACAAGGACCTGAAAAACAACTATGATAGGATTGAGCTTGATGAAATTGTGCAAGTGGCTCTTTTATGTACTCAGTACCTTCCAAGTCACAGACCCAAGATGTCTGAGGTGGTTAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCCTCGCAGAGAGCAGAATCCACAAGAAGCAGAGGAAATGAACTTTCTTCTTCAGAGCGCTACTCTGATCTCACTGATGATTCTTCATTACTTGCACAAGCAATGGAACTTTCTGGGCCAAGATGA


Promoter Sequence:
>Vu_14545::LG3:49302656-49304656(-)
GAACCTCGTGAAGAGTGTAACAACTCTATGGAGATAGATAATGAGGTGTGTGAACCTCATGGAGGGTGTAACAACCCTATGGGTGTACATAATGAGGTGTGTGAGCCTCACAAAGGGTGTACTATTCCTTGAATTTTGAAACTTATGGACATTTCAGTAATGTGTATTTTTCGATATAATTTTAGATTTTTTCTTTGAATTGTGTTTTCGAGTCATCCTCTAAAAATGCATGGTGTGTCATGGTGATGCGGGCATGATGAATATATGGGTAGAATTTGTGTGAGACCCTTGTTCACTTTTTTTTTTTTTTTTAATTTCTGAATGTTTTTCAACGACGATGTTATCTGGAAACATTAGTGTAAACCTACATACGTATCATGAATTTCTATTGGACATTGATGATGCATACTGTGTTATACTCTTTTTTTTTTTTTTTTGAACTCCTATGATAATGTATGAATGATGTTTGAATGCATGAATGGACCTATAACAAAAAAATCTCGATTCAACCATTGTCTAGCAGAATGTCGATAATGTCGATAGGGAAAGACTTTTGCTATGTGGACTAGACAAACTGGGCTTAAAAATATAAGACCATTTATACGTGTGTTAAAGGTTATCCAAGATGTGAGTTTTACCAAACTTTTGAAAGAAACAAAAAATGAAGTTCAGATTAAATGGAGGTCTGCGCCCATGGCGCTGACAGAAAACATGCATTTTGTGAATTACACTCCAATTTCGATGATTAAGATTTTGTGAATGTAATTGGAGGTTTGGAATAATCTCAGTAGAGTAGTAGGGAAACATATTTATATTAACAGAGTGTCAGTTCTTTTGCTTGGTGGGTTCTGCATGTCAGCTCTGTTATACAAAGCAAATTTGATGAAAAATTAAAATCAAAAGTTCCTATAGAAACGGGAGTGAAATAGACATTACATACCCCTTGTACTTCACGACACACCCTGGCTTGTTTGTAAGCAGGGCATTTTGGGACTTTCCAAGAGGGAGAATTCAGAACAGTGTGAGAACAGCTTTTGCTTTTAAAAGTAGGTTGCTTTTGGCTTGTTTATTAGAGGAACTGTCTGATGAATGTGATTATTTGGAGACAAAATGAGTGATTGAGAATCAATAAAGCGTAGGCAACTAAGATTAGCATGGCCAAAGAAAATAGAAAGTAACAGTGAGAGAAAATGGGAGACATAATTGACACAACAAAGATCTCACAAGGAGGAGCCATTGCATCACCAATCTCAACCACAATCCCTTGGGATTCTAACTTTTTCTCATAATAATTGAATAAAACGAAAGAAAGTGGAGTTCGGTACTTAAAAGATGATGAATGGCATACCACAGGGACAGAGAATGTTTTTGGATTCTAATTTTTCTACAGAACACCTAGGAGAGCTTATAAGTTCCAGCTGATCCACTTTGTGTTGATGGCAGCTAAACTCATTGACCCACTTTGTTAATTTTTCTGATTAAGGTCCATTAGTGCTTAACAGATAATACTTCACTTGCTCTCACTTCATTTTTTCTTTTAGTATTATATTTGAAGGAATAGAATAATACTTTACACTCCTCCTCTTTAGACCAATGCATGATTGATGGAATTTTCTTTTTCAATCATCTTTTACATTTATCTAGAAAGAGGCTAATGGAGGGGTGCTTCATGTCTTTTTATTATATATTCTTTCCTTTCTTTGTTGAACCATTAGCAGGCATGCTGGCTCTCTTTTAAGTCTTTTTACCATTGGAAGTCTGACACAAGGATGGGAGTGAGTGCAATTCTGGCCTGAAAGCAGGTGGGAATGGTATTCTTGGACTTGGTTGAGCTTCCTCTTCTGATGTAAAGCATGACATGTAACAAAAACAAACCAAGTTGGAATTGTTGGTGTCAGCTGAATCATTCAAAACCTGCTCCTTTAGTTGCCTCCTCCTTAACTTGATCCAGTTTTGTTGTGCAAATAACTAATATAAGTTTCTGTTGATCCTTCGACCCA


Gene Sequence:
>Vu_14545(-)
ATGGAGAGAATAGGGGAAGTAGCTTTCTTTTGTTTAGCTTTGTTCTTCTTCCTGTCGACTTCAGTGGTTGGTTTGCTTTCTCCCAAAGGTGTCAACTATGAAGGTGATTGAGTAGGAGCACTTCCCTTAATTCTTAGAGCAGATAACTGTACGGTCACTCTCATCTCCTAATAAATTCTTGTCTTACATGCAGTTCAAGCTTTGATGAGCATTAAGAACTCTCTCATGGATCCTCATTCTGTCTTGAGTAACTGGGATGAAGATGCTGTAGATCCTTGCAACTGGGCTATGGTCACATGTTCCTCTGATCATTTTGTCACTGCCCTGTAAGTAAAACTGGAAAAAAATCAAACCATAACAAGATATATTCAGTTTTTCTGCTTCTTAACATTCTACATATTTCATCCTTTTCTTTCTCAGTGGGATTCCAAGCCAAAATTTATCTGGCCGCCTCTCACCAAGCATAGGCAGTTTAACAAACCTCCTCACTGTGTGAGTGACTTGCTACTTATAGTAAAAGAAAACTTTGTGTCAAGAATACTATCTTACTATGCATTTTGCAGGCTTCTGCAGGATAACAATATTACAGGACCAATCCCCTCTGAGATTAGTAGGCTCCAAAAGCTTCAAACTCTTGATCTTTCGGACAATTTCTTCACCGGGCAACTTCCAGATTCCCTTTCCCAAATGAAGGGTCTCCATTACTTGTTAGTTCAAGAACATAACGCTATGCATTTTCTTATAGGCTTTACAGACAAAACGTGTGTTAATTTCCTATCAAGAATTTGATCATAGGAATTTGAATTTTTATCAGGCGGCTAAACAATAACAGTTTGACTGGACCAATTCCTTCCTCTTTGGCTAACATGACTCAACTTGCCTTTCTGTAAGTCTCTTCTAGACTTATGGCTACCATCGATCTTTTTTTCCTCTTTAGTTAAGTTGATTTATGGTCAGTTATCTGTCTTCTGCTGAATTTTTCTTAGGGATATCTCTTATAATAACTTGAGTGGACCTGTACCAAGAATAAATGCAAAAACATTCAAGTAAGGTCTTAATTTTTCTGTTTTCCCAACGTGAGTTAAAATGATATAAATTATGTGTACGTCTTATTAATTAATTGTATGTTTTTCCTTCTTTCGAAACAGCATCGTAGGCAATCCTCAGATATGTGCCGCTGGAGTCGAGCAGAACTGCTTCAGGACAACGTCAATTCCTTTGGCTCCCAATAATTCTCAAGGTAATTATAGTTCTTTCATGTTTTAGATTTGTGTATGCTTTTTCACCCTCATGATGTTGAATCTAAAGCTTTTTTCTTCTTATCGGTCATAAAGTAGACTTGGACTTGGTCTAAAACTTAGTCGAAAAGTACTTTTTTAGGGTGCATAATTATTTCACAAAACAGTTAAAAACTATCATCTTCTAAGTTGTCTTAACGTGTTTATAATCATTGCTTCCATCATTCTCTACCCGTGTTTACTTTTTTTTTCTTTTTTCATGCAACTTTCTCAAATGCTTTCCAAGATTCCCAATCCACCAAAAGACCAAAGAGTCACAAAGTAGCCTTGGCGTTTGCCTCAAGCTTAAGCTGCATATGCTTACTAATTCTGGGACTTGGCTTCCTCATATGGTGGAGACAAAGGCATAACAAGCAAATATTCTTTGATGTTAATGGTTAGTGGATTATGAACTGAAGTATTCACAGGCCAACTTGGTATGTATATTATTGGTTTAATCTTCATTAACTAAACTCTTCTTCCTCTTTCAGAACAACACCGTGAAGAGGTTTTTCTTGGAAACCTCAAGAAGTTCCATTTCAGAGAACTTCAGCTTGCTACAAACAACTTCAGCAGCAAGAACATGATTGGCAAAGGTGGTTTTGGACATGTCTACAAAGGGTATCTTCAGGATGGTACAGTTATAGCAGTAAAAAGGCTCAAAGATGGTAACGCTATTGGAGGTGAGATCCAATTCCAGACTGAAGTTGAGATGATCAGCTTAGCCGTCCATCGGAATCTTCTTCGGCTATATGGATTCTGCATGACAACTACAGAGAGGCTCTTGGTTTATCCTTACATGTCAAATGGAAGTGTCGCTTCTCGTCTGAAAGGTATGGCAATTTTATCCTGCCAGATTGGTGTCAGTGTGTATCATTTGTTTTATGAAGTAGGAGTATTCATTACCTTTATATGAAACAGCCAAGCCAGCATTGGACTGGCCTACCAGGAAGAGAATAGCTTTAGGAGCTGGAAGAGGCTTGCTATATTTGCATGAACAGTGTGATCCAAAGATTATTCACAGGGATGTAAAGGCAGCAAATATCTTGCTTGATGATTATTGTGAAGCTGTAGTGGGAGATTTTGGGCTGGCAAAGCTTTTAGATCACAGGGATTCACATGTGACAACAGCAGTGAGAGGCACTGTGGGACACATAGCCCCTGAGTATCTCTCAACAGGTCAATCTTCTGAGAAGACAGATGTCTTTGGATTTGGAATTCTTCTTCTTGAACTAATATCTGGCCAAAGAGCACTTGAGTTTGGAAAAGCAGCAAACCAGAAAGGAGCCATGTTAGACTGGGTGAGCCGACCAGAATTAATTTATTTCTTCTTTAATATGTTGGTTAGTCCTCAGATAAAGTGAATATTGGCATTAGTTTTTACAAATTTTTTATTACTATAGTAACCTTTTAAAATGGTTATATTTAGGAGGACTAAAACTAACCAAAAAGGTTTTCGAGTTGGATCTATCAAGTAAGAGGTTCACTGGGAAGATACAAACACTGATGAAATATGAATCCAACCAAATAAGGGTTGACATCACTCTCTATCCAAAACATCAAAACAATGGATTAATGGATCTTTCACCTTTATATAGTTTTTACTTTCTCATTTCTATTCAATGGGGGACTTGTATTCACACTTGAATTCCCAACATACATGCCCTTTTGTTGCCTATTTCTTTACTTACCTAATGAAAAATATTAATAGATAAACCAGTCAAAGTAATTTCTTTCGTAATTTATTTCAGTATAACTGAGTTATAATGTCATGTGTCCTAAATGTATTCACTATACTTGCAGGTGAAGAAAATTCATCAAGAGAAGAAAATTGACTTGTTGGTTGACAAGGACCTGAAAAACAACTATGATAGGATTGAGCTTGATGAAATTGTGCAAGTGGCTCTTTTATGTACTCAGTACCTTCCAAGTCACAGACCCAAGATGTCTGAGGTGGTTAGGATGCTTGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCCTCGCAGAGAGCAGAATCCACAAGAAGCAGAGGAAATGAACTTTCTTCTTCAGAGCGCTACTCTGATCTCACTGATGATTCTTCATTACTTGCACAAGCAATGGAACTTTCTGGGCCAAGATGA