Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_14813 LG3 52828517 52830708 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   nectary development, style development, style development, carpel development, cell fate commitment, style development, regulation of transcription, DNA-templated, floral meristem determinacy, floral meristem determinacy, leaf development, floral meristem determinacy, regulation of transcription, DNA-templated, style development, polarity specification of adaxial/abaxial axis, cell fate commitment, carpel development, floral meristem determinacy, style development, style development, style development, style development, nectary development, carpel development, floral meristem determinacy, floral meristem determinacy, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, leaf development, carpel development, nectary development
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, protein binding, protein binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, DNA-binding transcription factor activity, sequence-specific DNA binding
SNP Position Effect Amino acid change
A/G 52828520 missense_variant p.Asn2Asp
G/C 52828526 missense_variant p.Asp4His
A/G 52828760 intron_variant
G/A 52828829 intron_variant
A/G 52828837 intron_variant
A/C 52828843 intron_variant
G/T,C 52828847 intron_variant
G/T 52828851 intron_variant
A/T 52828854 intron_variant
C/T 52828857 intron_variant
T/C 52829233 intron_variant
A/G 52829390 synonymous_variant p.Ser45Ser
T/A 52829393 synonymous_variant p.Ser46Ser
T/A 52829501 intron_variant
G/A 52829517 intron_variant
T/A 52829592 intron_variant
C/T 52829601 intron_variant
G/C 52829607 splice_region_variant&intron_variant
C/T 52829608 splice_region_variant&intron_variant
T/A 52829684 intron_variant
T/C 52829685 intron_variant
T/C 52829688 intron_variant
C/T 52829714 intron_variant
T/A 52829811 intron_variant
A/T 52829883 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_14813.1
MNHDDKLTMDLVPPSEHLCYVRCNFCNTVLAGFYSNAKKGQASSSSSSPTTSNESVSPKAASFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNIDGAVALWFREN*


CDS Sequence:
>Vu_14813.1
ATGAACCACGACGACAAACTCACCATGGACCTGGTTCCACCATCTGAACACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTCCTCGCGGGGTTTTACAGTAATGCCAAAAAGGGACAAGCATCGTCTTCATCTTCCTCACCAACCACATCCAACGAGTCAGTGTCTCCCAAAGCAGCATCATTCGTTGTGAAACCACCTGAGAAAAAGCACCGTCTCCCATCTGCATACAATCGTTTCATGAAAGAGGAGATACAGCGCATCAAAGCAGCTAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCTGCGAAAAATATTGATGGAGCTGTGGCATTATGGTTCAGAGAGAATTGA


Promoter Sequence:
>Vu_14813::LG3:52826517-52828517(+)
TACGAAACCAAATAATCTTTCAATTGTTTTTATTTTTTTGTTTTCATATTTGTTTAAGATTATAAATTCGATTACTTAGAGGATAATCATGTTTAACAACTCCAACTTTAAAGATTCAATCAAAATTTAAATTTCTAAGCCTGTATTTCAAACCACAACAAAGAAGGAAAATATGTTTGAGTGTTACATATACACTTAACCATCAATCTATTATTCACTAAACTAACGATATCTTACATGACAAAAATGACCAATGTGTATAATGAATATAATTTTACACTAAAATATATAGTTTGTGGATCTTTTTGGAGTGGCACAATTGATCCAAATCTTAAAGAACCAGAAACATGCATTTTTTTTTCTTAAGATGAAACAATATTAAATACTCAAGTTTGTTCTTTAAATACATTTAACTCAAGGTAAAAAAAAATACTTTTTCCATTAATAAAAAATATTATTATTCATTCATATCCATAATAGTCAGTTTTACAAAACAATTAAACGAATTATTAATTTTTTAATCTGTAGTGTAATTTTAAAGGAGTTATTCCTTTTATATACTTCTTTTAGTTTTTTATATTTCAGCATCGCAATTAAAATTTTCTTCCTTCCTATTAATTACATGAAGGATAAAATTATAAAGATCATATTATTTTGAAACTAAAAGAAATGACAGATAAAAAGTAGCATTTTTACAAAAAAAAAGAGAATTAAAAAGAAATGTTACGTGCCTAGTGCCAAAATCAGAGCAGGTTAAGTAATGAAAAATATAATTTTCCTTTGTTTATTGGTTTCTTTTTCTTTATTTATTTCTTATCTAATGTCTTAATGATTAACGTAATCTTAGATTTTATCACTGATTCTAAAAAGTTTAATTATGTTTTTAGTTTCTAAAATTAGGGTAAAATAATATTTTAGTGTCTCAGATTTAAAAATATAACTTTATTTCATAAAACTTATCAAAAAGTACTAAAATTTATTCTTACGAATTTTATAATATCAAAATAAAATCCTTCTCAATTTTCTGTAACAAATATAATTAAAAAGTTTGAGCATAAATAATTTCATTTATAAATAAAGTAAACCTTGATTTAATTTATGAAACCAAATCAATTGAAAATGACATTTGCAAAAAAATCACTTAAATGCACATACAGTTTATCAATATTTTATTGAAAAATTGGAATAAAAATGTGTTTTTTTTTTCTTCAACAGATCTCAAAATTCAATTTTAATTCCTACAAAATTTTAATTACATTTTTCATTGATAATAAACTTAAGACATGCATAATGCAATAGTGAACTTAAGCCATGTATACAGAATGACTCACACCAATGAAGTAGTGAACTTCTTAAATTTCTGCATATTCTTTTATTAATTCAACCTTGTAAATTTTAATGACTGAGTGAACCTATAAACCTTAAATTAAAAGTAAAGTCACTGATGATTATAACAGAATGAGTAAACTTGTTAATATTTGGCTAAAAGTTAAATTTGTTTTTTCATTAATGGAAAAGTTACATTTTTTAACGTTGACTGAATGTATTTAAAGAAGAAAACATGATTATCCAAATGAAGCTAAATTGATGATTAACAGAATAAAATAAAGTTGTATTTGAAATAGGATGAGTATAGATAAATATATACATGTATATATGTGCGATAAAGTAACCATATTTTGGCCATTGTAGATGGTTAATTAGTGTCAGTGATTGGTGCAGGTCATGTCTGGAAACAAAGCGTGCAATATAATGCTGCAGCAAATTGTACTACTAGAAGACCAAGGTAAAACTACTCTTCTTTTTGACGCTACCCCACAACACAATACAACAACAACACATCACAACACAACACAACACAATTCCTATTCCTATATATCACCCACTGACCCTTTCAAATTGCTATCTTAAACCCTACAACTGCAACATTTTCCTCCCTCTGCTAAACCTACTCACTCCTCTTTCACTCTTCTCCTCCTAACCCTTGTTCCTTCGAAATA


Gene Sequence:
>Vu_14813(+)
ATGAACCACGACGACAAACTCACCATGGACCTGGTTCCACCATCTGAACACCTCTGCTACGTTCGTTGCAACTTCTGCAACACTGTCCTCGCGGTAACCTCATCTTTAAACACACCAACCATCACTCGTGCTGTTATTTATTTATCTTACTGTCTATCATAACGTTACGTTTATACTCAACTTCTATGTATGATACAACAATAAATATCCAAGCTTTCAAAAAGGGTCTGCAGATATGATTTCAGTTGCAGCATCAAGTCTGTGAGCACATTTCTGTTCACAAATTTTTAGAACATGACTACGAAACCTTGTGTATAGCTATTTGAAAATGATTGTCAAACATTTCATTAGAAAAACTAATTTCTTAAGATAACTAGTACAGGTAGTAGTACTCAGAAGTACATTAACAAAAATAATGTTTCCTAAAATTCAAAGAGGGAACTAGAAATATTTACATGCAGGGTCATGTTGATGTTTGTGCAGGTTGGTATCCCATGCAAGAGGCTGTTAGACACTGTGACAGTGAAGTGTGGCCACTGCAGCAACCTCTCCTTTCTGAGCACCAGACCCCCAAATTCTCAAAACCAAAGCATTGATCACACCCTCAGTCTCCAGGTTGTGTACCTTCATAATTAAATATTAATGTCAATTCATGAACAACCATATATGCCATCTATATTCTGCACTATGCAATACTTGTGTTTCAGTTTTCTTCTTCTTGTTATGCTATATTTGTGCGTATATAGGTTTTACTTTGAGATCAATAGTATAGTGATGGTTGGTTAGAGAAAAAGTGAGAGTATGTAAGCACCATCTCTTTTGTTTCCAGCAGGGGTTTTACAGTAATGCCAAAAAGGGACAAGCATCGTCTTCATCTTCCTCACCAACCACATCCAACGAGTCAGTGTCTCCCAAAGCAGCATCATTCGTTGTGAAACGTACGTAGTTACCACAGATCGAACAACCCTTTTCAGAACCCTCTCCTAACAAATATAACATGGCACTTACATAATCATATGATGTGTTTTTCTCAACTCCAACCATGTAAACTTATATGTGTTCTTGTTTCTTTTCTTCTCTTTTTCATTTGGCAGCACCTGAGAAAAAGCACCGTCTCCCATCTGCATACAATCGTTTCATGAAGTAAGTGCAAATGAAATTGTACTTTTTTTGTCTTTTGCTATCACAAACACAGCCCACCCACACCATCACCACACTATCTCATTCTCTCTTATTCCCTAAACAGTTCAACTGAGTTTCTTTTCCTTCAATTGGTTATCGTGAAATGTAACTTTTTTCATCAGTTTCATTGTTTATGAAGCAGACCAATCCTTTCTGAAAAGGCTTATTAGAAAGATCTGTATTTATTTATATATATATATATATATATATATATATATATATATATATATATATATATAAAGGTCATCATAAGTCACTTTCATATCATCTTAAACTAGTTTCCAAATGAAATATTCATACTTATTGTATAACATTCACAAGTTGGTTGATTTTGCTGTGCATGTCAGAGAGGAGATACAGCGCATCAAAGCAGCTAACCCTGAGATCCCACATCGAGAAGCTTTCAGCGCTGCTGCGAAAAATGTAATTATTTTTTTATTCTAACCCTCAGTTTAGGCTTTAGGGTTAGTACTGCGCATGCTTATAACTACCTTAAGGTTTCTTGAAACTCACAAGATATATTCTCATTTATATATATAATATTCCTATTTTGTTGTGCTGCACAACTAATTAACAGTGGGCAAGGTTCATTCCAAATTCACCAACCAGTTCAGTTTCTGCAAGTAAAGTTAATGTAAGAATTTCTTATCCTTATATATTATATATTAAAGTTTAATTTATTATAATTGTATTAATTTTATCTTTTGATTCTTATATTTTGGTCCTTACACGTATCATTTCAATTGCTTTTAGTCTCTATAAATACCACTTTTAATTTTGTTTTTAGTCTCTGTTCTTTAAATTCATGTGAATATTAAAAATAGCATAAAAACTAACGAGAATGATATTTAAGTATAAATTTTAAAACATAACATTTGTTTAACTAAATGAATAATTTAACCCATTATTACTTTCTTGCTTCACCAAGATTATTAATTATGTGTTAATTTTCATTAACTTTGTGCAGGCAGATTGATGGAGCTGTGGCATTATGGTTCAGAGAGAATTGA