Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15222 LG4 4616112 4620658 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   response to brassinosteroid, signal transduction, protein autophosphorylation, response to brassinosteroid, protein autophosphorylation, protein autophosphorylation
Cellular Component   is active in   cytoplasm
Cellular Component   located in   nucleus, nucleus
Molecular Function   enables   protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity
Pathway   B 09191 Unclassified: metabolism   C 99980 Enzymes with EC numbers
SNP Position Effect Amino acid change
T/A 4616446 intron_variant
A/T 4616849 missense_variant p.Leu397Gln
G/C 4616850 missense_variant p.Leu397Val
A/C 4616851 missense_variant p.Asp396Glu
G/T 4616939 intron_variant
A/T 4616945 intron_variant
T/C 4616958 intron_variant
G/T 4616975 intron_variant
T/C 4617076 synonymous_variant p.Arg359Arg
T/C 4617123 intron_variant
C/T 4617187 splice_region_variant&intron_variant
G/T 4617268 intron_variant
C/A 4617477 intron_variant
G/C 4617492 intron_variant
C/A 4617525 intron_variant
A/G 4617601 synonymous_variant p.Ala329Ala
A/G 4617664 synonymous_variant p.Leu308Leu
C/T 4617688 synonymous_variant p.Ser300Ser
A/C 4617749 intron_variant
G/A 4617757 intron_variant
G/C 4617778 intron_variant
G/C 4617786 intron_variant
A/G 4617808 splice_region_variant&synonymous_variant p.Leu288Leu
G/A 4617912 intron_variant
G/T 4617916 intron_variant
T/G 4617926 intron_variant
A/G 4617957 intron_variant
A/T 4617981 intron_variant
T/C 4617995 intron_variant
T/C 4618008 intron_variant
G/A 4618022 intron_variant
A/C 4618025 intron_variant
G/T 4618043 intron_variant
T/C 4618049 intron_variant
A/G 4618062 intron_variant
T/A 4618128 intron_variant
T/C 4618142 intron_variant
A/G 4618214 intron_variant
A/T 4618223 intron_variant
T/A 4618227 intron_variant
A/C 4618260 intron_variant
A/T 4618264 intron_variant
G/A 4618318 synonymous_variant p.His254His
A/G 4618350 splice_region_variant&intron_variant
C/T 4618365 intron_variant
C/T 4618376 intron_variant
C/G 4618431 intron_variant
A/G 4618442 intron_variant
T/A 4618443 intron_variant
G/A 4618458 intron_variant
A/G 4618465 intron_variant
T/C 4618479 intron_variant
T/C 4618567 synonymous_variant p.Thr218Thr
G/A 4618600 synonymous_variant p.Tyr207Tyr
G/A 4618622 missense_variant p.Ala200Val
A/T 4618781 intron_variant
T/A 4618810 intron_variant
T/C 4618846 intron_variant
A/C 4618991 intron_variant
C/A 4619075 intron_variant
A/C 4619114 intron_variant
C/A 4619154 intron_variant
C/A 4619213 intron_variant
C/T 4619235 intron_variant
T/C 4619297 intron_variant
A/G 4619302 intron_variant
G/C 4619360 intron_variant
G/T 4619365 intron_variant
G/A 4619389 intron_variant
A/T 4619430 intron_variant
G/T 4619526 missense_variant p.Leu119Ile
A/G 4619646 intron_variant
T/C 4619703 intron_variant
T/C 4619716 synonymous_variant p.Glu101Glu
A/G 4619746 synonymous_variant p.Ile91Ile
T/C 4619788 synonymous_variant p.Ser77Ser
A/C 4619886 missense_variant p.Tyr45Asp
G/T 4619912 missense_variant p.Thr36Asn
T/G 4619914 synonymous_variant p.Gly35Gly
G/T 4619941 synonymous_variant p.Thr26Thr
T/G 4620016 intron_variant
A/T 4620111 intron_variant
C/T 4620173 intron_variant
C/T 4620262 intron_variant
A/T 4620263 intron_variant
A/C 4620306 intron_variant
C/A 4620443 intron_variant
G/T 4620469 intron_variant
C/A 4620473 intron_variant
A/T 4620580 intron_variant
G/A 4620623 synonymous_variant p.Ser12Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15222.1
MNMMRRLKSIASGRTSISSDSVGDSTTKRPKFDQGTEEKVFEETYSMEKCGKDHEQYGDALAESVNSNNATTRSEKSGYDQLPKELNEMKIGDDKGKNNNEKDMEATVVNGNGTETGQLITTVIGGRDGQPKRTISYMAERIVGTGSFGVVYQAKCIETGEAVAIKKVLQDKRYKNRELQVMRILDHNNVLRLKHCFYSAAEKDELYLNLVLEYVPETVYRVSKHYIRMHQHMPIIYVQLYLYQICRGLNYLHHVIGVCHRDIKPQNLLVNPQSHQLKICDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVMAELLLGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPAEAVDLVSRMLQYSPNLHPNACLPNGRPLPPLFDFSAQDNHTSNATFPNSLGLCCPSYTIMTIQLIGNLKAMQPLGRQGLAGDNLMNEVDQPGDGVATIF*VVYD*FM*STSCKR*


CDS Sequence:
>Vu_15222.1
ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCCGGGAGGACTTCCATTTCATCAGATTCTGTAGGTGATTCTACCACAAAAAGACCTAAGTTTGATCAAGGAACCGAAGAAAAGGTCTTTGAGGAAACATATTCTATGGAGAAATGTGGAAAAGATCACGAGCAGTATGGAGATGCATTGGCAGAAAGTGTTAATTCCAATAATGCTACAACCAGATCTGAGAAGTCAGGTTATGATCAACTTCCAAAGGAATTAAATGAAATGAAAATTGGAGACGACAAAGGAAAAAATAACAATGAAAAGGATATGGAAGCCACTGTTGTAAATGGTAATGGAACAGAAACAGGCCAACTAATTACAACTGTTATTGGTGGTCGAGATGGACAACCAAAGCGGACAATCTCGTACATGGCAGAACGCATAGTTGGCACAGGTTCTTTTGGTGTTGTTTATCAGGCCAAGTGCATTGAAACTGGTGAAGCAGTTGCCATAAAAAAAGTATTGCAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGTATACTTGACCATAATAATGTTCTCAGACTAAAGCACTGTTTCTACTCAGCCGCGGAGAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTGCCTGAAACAGTCTACAGAGTTTCCAAGCACTATATCAGAATGCACCAACATATGCCTATCATTTATGTGCAACTGTATTTGTACCAGATATGCCGGGGTTTAAATTATTTGCATCACGTGATTGGAGTCTGTCATAGGGACATCAAGCCCCAGAATCTATTGGTTAATCCCCAGAGTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCATACATATGCTCGCGGTATTACAGAGCTCCAGAGCTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGCTGTGTTATGGCTGAGCTTCTTCTAGGACATCCAATGTTTCCTGGAGAGAGTGGTGTTGATCAGTTGGTTGAGATCATTAAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATAAAAGCTCACCCGTGGCACAAGGTTTTCCACAAGAAGATGCCAGCAGAAGCAGTGGATCTAGTGTCGAGGATGCTTCAGTATTCACCAAATCTACATCCAAATGCATGCTTGCCAAATGGTCGACCACTGCCTCCGTTGTTTGATTTCAGTGCACAAGATAACCACACCAGCAATGCTACTTTCCCTAACAGTCTAGGTCTCTGCTGTCCATCCTACACAATCATGACTATTCAGCTCATAGGAAACCTTAAAGCCATGCAACCTCTTGGTCGTCAAGGACTGGCAGGTGACAATCTGATGAATGAAGTAGATCAGCCTGGTGATGGGGTTGCAACCATTTTTTAAGTAGTTTATGATTGATTCATGTAATCCACCAGCTGTAAAAGATAA


Promoter Sequence:
>Vu_15222::LG4:4620658-4622658(-)
AAAATTGTCAAATGACTAATGTGTTTGAATAGTAATATGTTCAAGCAATATGTTACAGTAACATATATTTCTGCTACTATTTAATTCTTTCATTATTTTATTTATTGTATACTATATAGAGAAACTTAGAGCATAACTTTGAAAACTAAGTCGTCTCAACAGGAAAACTACTAAAACAATATAATGTATGAATTAAAAAATCCAAAAAATCAATGTTTCAAAAGATTACTAAAAAAATGAAAGTCATCATGGAGGTTAGTAAATGGTTGAATCTTTGATCAATTCTTTTATCGGTTCAACTTTTATATTAAAAGGCATTGACTAACGTAACTATTTTTATATTATTCTTATAGACATAAAAAATAGTTTGCATTTTCTTTTTCTTATCATAAAGAATAACTGATGAAAAGTATGGAGACTATTAAAAAAAATGCTTAACTACCTTTAATATTTTTGTATCATATTGGAATTCTTCACTAAAGTTATTAAGTCTTCAACTGTGGAGCTCATTAAGGTAAACATTTTTCGAAGGCATTTTTTTTTTAAAATTTTGCCAAGTGATTAAAATCTGAAGTGTTTCTTTTTAAAAAGTTTTTCTCTTAAACATTTTATTAAACTGGTGTTTCTGATGAGATTGTTTTTTGAAATATTAATATTCATCAAGAAAGTCAATATTTAATATCTTGAATGAAATTTATATGGATAATTTTTAGCAAAATACTTCCTTTCAAATATCCATTTCTTATTAACAAGATAATACCTCTTTTTACATTTTTCATGCATTGAAACCACTTCTCTTCTTTTAACACAAATTAATAATTTGTAATTTTAAAAAAAAAATACAAAACGAAATTAACATTTTTTTTGGTGATATTTGTTTTTTAAAGTAAAAATAGTGATATAACAATATATTTTAGAACCTAATGAATATTTATAATAATTGTTTTACATGTTTTCGTGAGTGTGAGATTATTATCTTCCATTATTTAATTCTTACAGTTCTATAAATAATAAACTGAGGCACAAAAACATGTAAAACAATTTGGTATATATAATTAACCTTATTGGTTATAATAAAATGACAATGTACACCTTCTTTCAAAATAAGAAAACATTTAATTTTTCTTACTTGTTAGACAAGGAAATATAACAAAACATTTTAAGATATATATATATATATATATATATATATATATATATATATATATATATGTTATTTGTTGAGTAATTAGAAAAATACCATTGTTGCTTTTTTCATAGCAAAATGACATATAATTTACATGGAAACAATTCATAAAAATGATGTAATTTAACATTCCTATTAGATTCCTACAATAATGTTAAAAAAAATAAAATTCAAACCAAAATTAATAAATAAGAATTGTCAACTAAAATTGTTTTGCTTTTGAAACTTTGTCCTACATTGTCCTAAAATGTCGCATGATTCATAGTAGAAACACGATAATTCCTCCAAATATTCCGTTTATACCTCATATCTGTCTGAAGAAACCTTTTCTGTTATTTCACCCAAAATCAAGGGTGTTTGCGTAACTTCAGCTACGAACACCAACTTTTGTGTCAAAACTAGAAGATCGAAACGGTCCAATCTGTATCAACGACTGATCGATGGTCCAAATTTTACGTTTGACTGAGGTACAGACTTTGAATCTGGAATGATTGGAATCGATGGAAGTTTAACCATAGAAATTTGAGAAATTCAATAACTAGTTGTTAAAAAAAACTGAAAATTCCACCTGGCACCCAAATTTGAGAAAGTGGGTTCATAAGATCTGTGTGTTTGGCTCCATTTTCGCTTTCATCTTCTTCATCATTTTGTATTTGCAGAAAGCTGTTGTAGGAGAAGAGAGAGAAACTTCTCTCTCTTTCTCTTTTCTTTTTCTTCATTTTTTTTGACAAAAAAAAAACAAAAATTGGTGGGATTTGAGGGTGCTTAGGTTGTTGATTGAGTTGCGTTGTTGGGGTTGGAAGAATCTATTATT


Gene Sequence:
>Vu_15222(-)
ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCCGGGAGGACTTCCATTTCATCAGATTCTGTAAGCTTAACACCCTTTTGTTTTTCTTCCCCTACCAAAAGCTTTCATTTTTGTTTTTTTGGAGGAAGTTCCTTTTCCATTAGGTTGTTGTTTGCGAAATTGAAAAACTAAATTTTGATCCAGAAACAAGAAATCAACATGTTCATTGATTTGGATTGTCTGGATTATGCTTGTTGTGGGTAAACAAATTTCTTTATTTTTTTCATAATATGGTTATGAATTTGATTTAGCACCCTGATGGGAGTTATTACATGAGTGATTTCCTTTTTGCCTAGTTAATTGTGGTTTTTATATTTCTTCTGTTTTTTGTTTTTCTTATATCGGTTTTGAGATGTAGCTTTATTTGATTTAAGATGGTTTATGATCTGACCATTTGTGTGTTCATTGCTGTTGTTTTATTTATATATTTGTGTCTTGGATTCGATCAATTGTCAAGCTAATGAAGGCACAAGCCTTGTGTTAGTATTACATGATTGTATTAATTTGATTTTGGCGAGAACTATGATAAGCCTAACTACGAGGGAAGTTGGGAAAATGTTGTTTACCTTGGAGTTCAATATGTTTTTCCATTTTTAATGCATGGTAAAAACACATGATATGTTCCTATTGTGTTAGTTAAATCCAAACCATTTCTTTCCAGGTAGGTGATTCTACCACAAAAAGACCTAAGTTTGATCAAGGAACCGAAGAAAAGGTCTTTGAGGAAACATATTCTATGGAGAAATGTGGAAAAGATCACGAGCAGTATGGAGATGCATTGGCAGAAAGTGTTAATTCCAATAATGCTACAACCAGATCTGAGAAGTCAGGTTATGATCAACTTCCAAAGGAATTAAATGAAATGAAAATTGGAGACGACAAAGGAAAAAATAACAATGAAAAGGTACTTTTTATGATTCAGTTTTCTTGTTTTCTTACTTTTGATATTTGTTGGTCATTACTATCATAGTTCTCTAAACGTAAAGCTGTTTCTTATTTTTGAATGCAATCGTTGAGTCTGATAAATGATTTGCTTGTGCAGGATATGGAAGCCACTGTTGTAAATGGTAATGGAACAGAAACAGGCCAACTAATTACAACTGTTATTGGTGGTCGAGATGGACAACCAAAGCGGGTATTGTTTCCATGAGTTCCTCCTTACTTGATCATTTACTATCCTATTTGTTAATCTTATTTTATCGAGTTAGATTCTTAGAATCCCTTTTTCTAAATTTATTATTTATGCATTACCCTACCTGTTATATCTAATCTTTATATGAAGAGGATCAACCTTTTTGATGTCCTCTTTTGTTTTTCCAATTTTACCCTATTAATAACTTCTTTTTAAATTTAATTAATTATTAAAAGGATCATACGGTGAGAGAATATCCCTTCTGCAGTTTGGATATATTTTGTTGGCTTGAATATTAAAAATTGGATTGTTTATTGTAAAATTTCACTAGTTGGTATTGTGAAAGAAACTTTCCTACAATGTTTGTAACTGTTACCTTATCAGTGCTTTCTAGTTACTATGGGACAAAGGATTGTAACTATGGAATATTAGGTTTAGGTAGAATATTCTTTTTACTTTGTTGTATAGATGTATAATTATTTGTGTTAATGACTTGCTATGAAAATACTTTTGCATTGGTTAACTTTATTTTTGCCTGGTTCAGACAATCTCGTACATGGCAGAACGCATAGTTGGCACAGGTTCTTTTGGTGTTGTTTATCAGGTATTTATATTTGATTTGCAGCATTTCTTCACTCATAATGGTTGATCCTTTTGTTCACTGTTCTATGTATATGTCAAGTTACTTTTTTGCTTATCCACTTTGCCTTGAATATACTGTAGGCCAAGTGCATTGAAACTGGTGAAGCAGTTGCCATAAAAAAAGTATTGCAAGACAAGAGATATAAGAATAGGGAACTACAGGTTATGCGTATACTTGACCATAATAATGTTCTCAGACTAAAGCACTGTTTCTACTCAGCCGCGGAGAAAGATGAGTTGTACCTTAACCTAGTTTTGGAGTATGTGCCTGAAACAGTCTACAGAGTTTCCAAGCACTATATCAGAATGCACCAACATATGCCTATCATTTATGTGCAACTGTATTTGTACCAGGTAATTGTGAATTTATTAATTAATCTTTTCCATTAAATTTTGGTTATGAATTTCCTTGATTGTGCTTGTAGTATTCAGTTATTTGCTTTGAGCTTATTACTTTTGTGCTGTTGTTGAATGATCGTGCTAAAACTCTTGTAGATATGCCGGGGTTTAAATTATTTGCATCACGTGATTGGAGTCTGTCATAGGGACATCAAGCCCCAGAATCTATTGGTAAGAACTTTTTTTTTTCTTTAAAATTTCTTGTTTGTTAAATGTATTTTATATTTTATATTTTATATATTTCTTGCAAGCACAAGAAAAAATCATTGCAAGTATCATGCTTGATACCACTAATTGAATAAATTGAAAAAAAAAATTGCATGTTAAACCTCATTTAAATTTGCCTAAGGGCATACGTTTTTAAACTATAGATATCCTATGTTATTGATTGGAAAAATAGCTAGGTTCTGAGTAAATTTTGCCTCATGCTGTTTAATTTGTTGTTCTCATTGATACTGTGGATGGACTGAGTTGATCTACTCATTGTAGATTTCAATAATGCTTTTCCGATAATGATAATTTTGACTCTGCCTACTGCTTGGATCTCTTCTTTATAACTGACATGTGATTGCATGTCACAGGTTAATCCCCAGAGTCATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGATGTTGGTATGTTTCTTTTGTTTTTCCTTATCACTATGAAAGTCATACAATAGTCTGTGCCTTAGCTTGTGATATTATCGTGCTTTAGGTGCCTGGCGAACCCAACATATCATACATATGCTCGCGGTATTACAGAGCTCCAGAGCTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGCTGTGTTATGGCTGAGCTTCTTCTAGGACATGTGAGAATTTATACTAATTCTCTCTCAATCTCATTTGTAGAGGAAATTTCATTTTTTGTTGTTGTAAAAGTTACATTTCGTTGAAGTTATCTGAGAGTTCTTTGGGTGATATTTGCATTTCAATACTGCTATGTTGTATTTTGATGGTTACTTGTTTTTCTCTTGGTATTTTTTGGAACTGGTACTCAGATGCTGCAAGAAGTAACATACAATTAACCTAATACCTGTTGTACAATGTGTTTCTAGTAGAATATAACTTCATCCCAGCAAGCACTAGAATTGAATAAATGACACGTTTTCATAGTAATGCTTATCTGTGATTGTGTTTTGCTTTGCAGCCAATGTTTCCTGGAGAGAGTGGTGTTGATCAGTTGGTTGAGATCATTAAGGTAAAAGGTTTTCATGTTCTTTATCCTTTTTGCTTGAATATATGTTTTTGTCTTGAGCGTTGCATCATTAATCTGAGTGTAATAATGTTTACTGTAGATCTTGGGAACACCAACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACTGAATTTAAGTTTCCTCAGATAAAAGCTCACCCGTGGCACAAGGTTAGCGGTTCTTTACTTCTTTGTGCCCCCACTTGCCCCTGGAGTATGCAATTCGTAAGTACTTGATAAATACTTGCAATCAGAGATCTAACTTGACCATTCTATTTATATCAGGTTTTCCACAAGAAGATGCCAGCAGAAGCAGTGGATCTAGTGTCGAGGATGCTTCAGTATTCACCAAATCTACGTTGCACTGCTGTAAGAAGTTAATTAGCTTTTAGAAATGTTACGCTTAGCAGCTTAATTGTATATTTATTTACAATATAAAGATCAACTACGTTACATCGTTCATACTTAACTTCATCCATGCTTGTACACAGTTTGATATTATTAAAACTAGGAAGATATTCAGTTTTCTATGTTTATTCTGTTGCAGTTGGAGGCTTGTGCACACCCTTTCTTTGATGATCTGCGAGATCCAAATGCATGCTTGCCAAATGGTCGACCACTGCCTCCGTTGTTTGATTTCAGTGCACAAGGTATGGAGGGGATAATCTTAGTGTGTTCAGTTAAATATTTTCTTTTCTATTACTTACATGAAAAAACAATGCAGAACTAGCAGGCAAACCGGAAGAGTTGCGTCGACGTCTCATTCCTGATCATGCAAGAAGTTGAATTCATTATTCAGCATTGTAAATGGGATTTTGGATGAATAGATAACCACACCAGCAATGCTACTTTCCCTAACAGTCTAGGTCTCTGCTGTCCATCCTACACAATCATGACTATTCAGCTCATAGGAAACCTTAAAGCCATGCAACCTCTTGGTCGTCAAGGACTGGCAGGTGACAATCTGATGAATGAAGTAGATCAGCCTGGTGATGGGGTTGCAACCATTTTTTAAGTAGTTTATGATTGATTCATGTAATCCACCAGCTGTAAAAGATAA