Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15540 LG4 9127446 9131799 PREDICTED: serine/threonine-protein kinase D6PKL1-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   phototropism, protein phosphorylation, phototropism, protein phosphorylation, sieve cell differentiation, protein phosphorylation, sieve cell differentiation
Cellular Component   is active in   cytoplasm, plasma membrane, nucleus
Cellular Component   located in   nucleus, cytoplasm, cytoplasm, cytoplasm
Molecular Function   enables   kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, ATP binding, protein serine/threonine kinase activity, ATP binding
SNP Position Effect Amino acid change
A/T 9127470 3_prime_UTR_variant
A/T 9127480 3_prime_UTR_variant
C/G 9127486 3_prime_UTR_variant
A/G 9127491 3_prime_UTR_variant
T/A 9127532 stop_lost p.Ter765Leuext*?
A/G 9127603 synonymous_variant p.Asn741Asn
T/G 9128080 synonymous_variant p.Ser582Ser
T/C,A 9128108 missense_variant p.Lys573Met
C/A 9128110 synonymous_variant p.Arg572Arg
G/A 9128212 synonymous_variant p.Gly538Gly
C/A 9128317 missense_variant p.Glu503Asp
G/A 9128441 intron_variant
C/T 9128471 intron_variant
C/T 9128549 intron_variant
T/G 9128570 intron_variant
C/T 9128616 intron_variant
T/C 9128758 intron_variant
T/A 9128807 intron_variant
T/C 9128841 intron_variant
G/C 9128953 intron_variant
T/A 9128966 intron_variant
A/G 9128969 intron_variant
T/C 9129041 intron_variant
G/C 9129070 intron_variant
G/A 9129088 intron_variant
G/A 9129111 intron_variant
G/A 9129205 missense_variant&splice_region_variant p.Arg471Cys
A/G 9129263 synonymous_variant p.Gly451Gly
A/G 9129360 missense_variant p.Ile419Thr
C/T 9129458 synonymous_variant p.Glu386Glu
T/C 9129470 synonymous_variant p.Val382Val
C/T 9129510 missense_variant p.Arg369Lys
G/A,* 9129512 synonymous_variant p.Phe368Phe
G/A 9129515 synonymous_variant p.His367His
A/T 9129527 synonymous_variant p.Leu363Leu
G/A 9129629 synonymous_variant p.Asp329Asp
A/G 9129680 synonymous_variant p.Ser312Ser
C/T 9129699 missense_variant p.Arg306Lys
T/C 9130202 synonymous_variant p.Ser138Ser
G/T 9130329 missense_variant p.Pro96His
G/A 9130436 synonymous_variant p.Gly60Gly
A/G 9130577 synonymous_variant p.Ser13Ser
T/A 9130632 5_prime_UTR_variant
A/T 9130658 5_prime_UTR_variant
A/G 9130659 5_prime_UTR_variant
C/T 9130676 intron_variant
T/C 9130689 intron_variant
A/G 9130713 intron_variant
G/A 9130749 intron_variant
G/A 9130776 intron_variant
T/C 9130786 intron_variant
T/A 9131097 intron_variant
C/A 9131108 intron_variant
C/A 9131189 intron_variant
G/A 9131221 intron_variant
C/A 9131228 intron_variant
G/A 9131313 intron_variant
G/T 9131416 5_prime_UTR_variant
A/G 9131430 5_prime_UTR_variant
C/A 9131455 5_prime_UTR_variant
A/C 9131551 5_prime_UTR_variant
G/A 9131616 5_prime_UTR_variant
A/T 9131621 5_prime_UTR_variant
T/G 9131650 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15540.1
MERVAEPKVLPRSLPVLVEVSNAHTAAMREAGQRLNAQDVSGVRGIPSREGNQFSKSRDGPMTRLASIREVAQLSNARIVLVREDMGFDTRSCQEPPSPVPTRTWKGKSSLPEAVELVPDIQTLKGSNDSFGETGPSSFAGASHPPEPVDTDLMRTVYVPIGQTKSEAACLMKSVSLKGSGPFLEDLSICVPAKKQSMAVVSPAESLVDESNVTHNIPSPLSGARASQNTENSPTAPDSEEKECVWDASLPPSGNVSPLSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFLEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLIRNIDGDPSKRAGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRKPKADPGLQSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRCLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRAVECDVVAAKFEAVDSVGVGMNNSSKRMGGNNEMKSGGKYLDFEFF*


CDS Sequence:
>Vu_15540.1
ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCTTTGCCTGTTCTGGTTGAGGTATCTAATGCGCACACTGCTGCAATGAGAGAAGCTGGTCAAAGACTAAATGCGCAGGATGTTTCGGGTGTGCGAGGGATTCCATCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCCATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCACGAATAGTTTTGGTTAGAGAGGATATGGGGTTCGATACACGGTCCTGTCAAGAGCCTCCCTCCCCTGTTCCTACAAGAACGTGGAAAGGAAAGAGCTCTTTACCTGAAGCCGTAGAACTTGTGCCTGATATTCAGACATTGAAGGGTAGCAATGATTCTTTTGGGGAAACTGGTCCAAGTTCATTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTGCCAATAGGTCAAACCAAATCCGAGGCAGCATGTTTGATGAAGAGTGTGTCCTTGAAGGGTTCTGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAAGCATGGCTGTTGTTTCTCCTGCAGAAAGCCTGGTTGATGAGTCAAATGTGACGCATAACATACCCTCGCCACTTTCGGGTGCTCGTGCATCTCAGAATACCGAGAACTCTCCTACTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTTAGTCCCCTTAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATCGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTTAGAGGGGATTCACTGGAGAGTGCAAAAACTAGTGCTAGCCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATAACTGGCAGTGCCAACAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAGCACGGGACGGAATTCTTGGCATGAGTCACTTCAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTTAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTTGGAGTATGCTGCACGCTTTTATGCAGCAGAGGTTCTGCTGGCACTTGAATATCTTCACATGCTTGGAGTGGTGTACAGAGACCTTAAACCTGAAAACGTACTGGTCCGAGAGGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATAAGAAATATTGACGGGGATCCCTCCAAACGAGCTGGTGGCGCATTCTGTGTGCAGCCGGCTTGTATCGAGCCTTCATCGGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTTTTTGCTCAGAAAAATAAGAAGTCACGGAAGCCTAAAGCAGATCCAGGCCTGCAATCAAGCACACTTCCTGAGCTTGTTGCAGAACCAACAACTGCTCGGTCCATGTCTTTTGTGGGCACTCACGAATACCTTGCTCCCGAAATCATCAAAGGAGAAGGTCATGGAAGTGCTGTCGATTGGTGGACATTTGGGATTTTCTTGCATGAACTATTATACGGTAAAACCCCTTTCAAAGGCTCAGGAAACCGCGCGACCCTTTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCGGAGTCACCGGCCACCAGTTATGCGAGCCGTGATCTCATCCGCTGCCTGCTGGTGAAGGAGCCGCAGCACCGGCTGGGAGTGAAGAGGGGTGCGACTGAGATCAAACAGCACCCGTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACTCCACCAGAAGTTCCAAGAGCAGTTGAATGTGATGTTGTAGCAGCAAAGTTTGAAGCAGTTGATAGTGTTGGGGTTGGCATGAACAATAGTAGTAAGAGGATGGGAGGTAATAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAG


Promoter Sequence:
>Vu_15540::LG4:9131799-9133799(-)
CCATGAGGTAAATTATAAATACAAAGCCAAGGCCGAAAACCAGGTATGTTCTATTTACGCTCAATTCATACTCCAATATGTTTCACTCACACTCACCCCATTCTCAAATACTCAAGTAGTGACAATTGTTCACTAAGCATTCAATTAAGAGCCAACACTCTTCACATCACACGCCTAACTTGGACGTCGGAGTGCCTTTTGCAGGTACCTCCTCCCTCATCCAGGAGATCGATCGATCTACACCAATGCCGATCGGACAACAAAGTAGATTGGAAGTAACCGAGCGATCTAGATTGAAGAAAGACAGACGATCCAAACATTCGGAAAAAACACGTCAACAGGTTAGTCTCTCAATTTTTAAAATATTTGCAAAAACAATAATGAAAATATAGTATAAGATTTGTTTATTAGAATTAGAAAGAAGAGAAGAGAAAATAAAGAAAAGAGAGGAACAAAATATGCCAAAAAAGCATTTGGGAACAGCAAGCAACGAAGCTAAGCCAATGAGAGGATTCTTTCAAACCCTAATCTCTTCAGCATCCCGAATATCCATCTTCACCAAAATATAAATAAAGGAATGAATAAATAAATAAACTCACCTAGCGCCATCATTCTAACTCACAAAAGACAAAATCTCCAGAACCTCCTCAATAATGGTTTCTTTAAGATTATATTCGCAATGACTTTGCCAACGATTTTTTATAAATTATTTATTCCAATTTTCTATATTTATTTTATTTATATTTTTCTTTTTTGTTCAATTAATCATTCATGATTTTAAAATTTTATTGTTTTACATATGTTTTTAAAAAGTATGCCTTTTGTTAACTATTCCTTTTATGTATCTAAGTTTAAGAGGATGTTTGAGAACAACTTCTTTATTTAAATATCTGTTTTTTTCAAAAGAAAAGCGACAAATGATTATTTTCTAAAGAAATTATTTGTACTAAACATATAATTATACTAGTCAATTATTGTTGGATTAAGTGAAAAGAATGTTTAAGCACTAATTAAGAGTTTGAGTACTTGGAGTATTCTCTTAAGAAATTATACATTTTTCTTATCACAAACAATCATATTTAAATTGTTAAGTACGTTTTGATCAATAAAAAATAGAATTAATCTCTTCTTAAAATTTTAGTCTAATTTAATCTTTAATTTTAAAAATACATGTATTTAGTCTTTTAAGTTAAATTTTGTTAAATCTTATGGTAACATTTTAATTGTTTGACATATTAATTTTATGATAAATTTTAAATTGTTTATATAAATATTAAATATTATTATTAAAATATTTAAAATATCAAATAAATTTTAACAAAATTTGATTTAAATAATTAAATTTATTTACTTTTTAAATTAAAACATAAAATTAAACTAAAATTAAAAAAATATAATATTTACTAAAACTTAAACTTAAAAAAAACGTATAAAATACGGTAGAACTAGAACCAAACATTTTAATATAAAAAGTTTGAATTGAGAACTACTCTAGATAAAAAGAACTATTATGTTCTTAAGGAGTTAATAATATGTATAATGGCGCATCCCATTGTAACTATTACGTGTAATACATAATCCAAACATGTAAACTACAGATTGTTTATCGTGTAAAAAATATTAATGGTCGTTGTAAAAAAATATATATATAAATATATATATAAATATATATATATATATATATATATATATATATATATATATATATTAAAGAGTAAAAAAAGTGAAAGAAAATTGATGGGAGTGATTGGCACGTGCCAATAGCACAATCTGAAAACAGAGATACTTGAAAAAAAAAACACAAAAATAGGTTAGAGTTGGGCATTCACTTTCTTTGTTTGATTGAGTCCCACCTTTGAAAAGCAGTGTACCACAAAGAAGGAACATGCATGGCCCCACTTTCTCTCTCTCTCTCTCTGAACAAAGTGTAGTACTATGCTACTACTACCTTCCATCATTAACTTCTTCCCACTCATTCAAATGCCAAAAATCAAAAAGAG


Gene Sequence:
>Vu_15540(-)
AAAGCAAAAGCTAACCATAACTATCTCCAACACCACTTTAGTTCCCCAGTCAGTCACACACAGCCCCTTCCCTAGACAGAGAAACTCAAACTCACTTCTATTCTATTCTAGTGAGAGAGAAAAACACACACCAACAAAATAAACAACTAAAAGGAATAAAAAACAAAAGCACCCCTCTTCAACCTTTTATTTTTCTCTTCTTGCTTCATCTTCCAATCTTCTCCCACCATTCTAGTTTCTTTCACACCTTCTCAGTCAAGACAGACACTTTTCTTGTTTCTGTTCTGCACGGTGAAGAAGCTCTGAGTTCAGTTGTGAAAGGAGACAGTATAGTGAAGAGGAGGGAAAACAAAAGGATACCCATTGTTTTTCTTCATCATTTCCATGGTGGGTCTCTATCCCTTCTGCCTATTATGCTTTTGGGTGCCTAGATCTCTCTTTGTTTCATCATTTTTTTTCCCTCTTTGTTTTCTTTTGTTTGACGTGCTTTGGGTCATGGTTTTCCAATGGAAACAAAATAGAAGATTGGGAGTTTTTACATTTTTTAACATTTCTCCATCTCTTGTTGTCTGTATTTTCTTGGTTCTTCTCTCTCTATCTTCTGTATGTTGCTTATTTCCTCTGAAGTTGAGGTTTCTTGCTCAAAGGTTTGTACTTTGAGATTATCTTATCAACGGGGCTGTGTCTGATTGTCAGGCATCAATTCCACCATTTCATCATATTTGCTCTGATTAACTATGTTTTCCCACTTCAAATCAATTTTCAAACTTTAACAATTTAAGCTCCTTTATATTCTGTGTTATGCTGCGTGTTTAGTATTGGGAAATAGAATTTACAGACGGCTTTGTTTTTATGTTGTCTATGATTTCTTGTGCTTGATGTTTCAAGCTATTAAATTGAGCTTTCTACATTTGTCGTTTCTCTGTGGATCCAATTTATAATGCTGTTTGTGCTTTCCGCAGCTACCACTAGTCACTACCAAGAAGAATAAGACTACTTTATTCTTTCATTCCATGTTCTTGTCATTTTACTCGGTTCCCGGCTTTTTCACTTGATAATTGGTTTTAAATTAAAAATACACAGTAATTCAAGTTGAGTGAATCTTCTGTTAAGTTAGTTCTTTGCTGAATTTGCAGGGTTTTCTTAACTAGAAGTCATTGTTTGATGATATGTGATATTGGGATATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCTTTGCCTGTTCTGGTTGAGGTATCTAATGCGCACACTGCTGCAATGAGAGAAGCTGGTCAAAGACTAAATGCGCAGGATGTTTCGGGTGTGCGAGGGATTCCATCAAGAGAAGGGAATCAGTTTTCAAAGTCACGAGATGGCCCCATGACACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCAAATGCACGAATAGTTTTGGTTAGAGAGGATATGGGGTTCGATACACGGTCCTGTCAAGAGCCTCCCTCCCCTGTTCCTACAAGAACGTGGAAAGGAAAGAGCTCTTTACCTGAAGCCGTAGAACTTGTGCCTGATATTCAGACATTGAAGGGTAGCAATGATTCTTTTGGGGAAACTGGTCCAAGTTCATTTGCTGGTGCAAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTATGTGCCAATAGGTCAAACCAAATCCGAGGCAGCATGTTTGATGAAGAGTGTGTCCTTGAAGGGTTCTGGTCCTTTCTTAGAAGATCTTTCAATTTGTGTTCCTGCCAAGAAACAAAGCATGGCTGTTGTTTCTCCTGCAGAAAGCCTGGTTGATGAGTCAAATGTGACGCATAACATACCCTCGCCACTTTCGGGTGCTCGTGCATCTCAGAATACCGAGAACTCTCCTACTGCTCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCATCTTTGCCTCCAAGTGGTAATGTTAGTCCCCTTAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATCGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTCACTAGTGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTTAGAGGGGATTCACTGGAGAGTGCAAAAACTAGTGCTAGCCGAGCAAGTGATAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATAACTGGCAGTGCCAACAAGCCACACAAAGGAAATGATCCTAGATGGAAGGCTATCCTTGCCATCCGAGCACGGGACGGAATTCTTGGCATGAGTCACTTCAGGTTACTCAAACGACTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTTAGTGCAACTCGATGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCTCAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTGCCTACTTTGTATACACATTTTGAGACCGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCAGGGGGTGATCTTCACACCTTAAGGCAAAGACAACCTGGGAAACATTTCTTGGAGTATGCTGCACGGTATGCTTTGAACTTTACAGATACAAATACACATTCATTTATCAGAACTGTGAGTAGCTGCTTTCAGTTGTGAAGATCTCCTTTTTCTAGTCCGTGACCTTTATGTATTCATCTGCATTTTGATTGTTGATTCCTTTCATATTTTGTGCTGTTGATGATACTATACACGATGATTATATTTTTCTTAACAATTATGCAGAGGACATTGTTGATTTTCCAATGGTGCTATAAATGTTAAAGTCATATGGTTCTGCTGCAGTATGAAAATTGAGACATAGCCGCTTATATAAAGTAGGTTGGCTAGATAATAAATTAGCTTTAGTGACATTGCCAGAATGCTCTTGCATTAACGATAGGTATAAAGCAGAAGAATTTGCTGCATTGAAGGTCTTCTCCAGGTCTGCTATAGGCCGAGATAATTCAGACTGCTAGGATGCCATGAACAATACTAATGTGTTAAAAAGCTTGTTTTTCCTTTTTCACCTTTCTTTTTTCCTGAATTGGATTAAATTTTCCTAGTTCTGGTTTTCCTTATATAAAAAATAAGGTAACAGCACATTGATGCTGTAACTATTCTTATATTAGTGGCTTTATATGAAATGCTAGGTTGTTCAATAGCATGCAGAGTCACTTATCTTTGAAGTCTGAAACAATGGGAAGGTATTAAAACATCCTAATCAGTGTATAATACAATTGGCAAATATGTATGTTTCTACATGAGTGGTGCTTTTTGGAAAATGTAATTTTCCTTTCCTGTTTTGACTAATAAAATGCTTGTCATGCTGTGTAGCTTTTATGCAGCAGAGGTTCTGCTGGCACTTGAATATCTTCACATGCTTGGAGTGGTGTACAGAGACCTTAAACCTGAAAACGTACTGGTCCGAGAGGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATAAGAAATATTGACGGGGATCCCTCCAAACGAGCTGGTGGCGCATTCTGTGTGCAGCCGGCTTGTATCGAGCCTTCATCGGTATGCATCCAGCCTTCATGTTTCATGCCTCGCCTTTTTGCTCAGAAAAATAAGAAGTCACGGAAGCCTAAAGCAGATCCAGGCCTGCAATCAAGCACACTTCCTGAGCTTGTTGCAGAACCAACAACTGCTCGGTCCATGTCTTTTGTGGGCACTCACGAATACCTTGCTCCCGAAATCATCAAAGGAGAAGGTCATGGAAGTGCTGTCGATTGGTGGACATTTGGGATTTTCTTGCATGAACTATTATACGGTAAAACCCCTTTCAAAGGCTCAGGAAACCGCGCGACCCTTTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCGGAGTCACCGGCCACCAGTTATGCGAGCCGTGATCTCATCCGCTGCCTGCTGGTGAAGGAGCCGCAGCACCGGCTGGGAGTGAAGAGGGGTGCGACTGAGATCAAACAGCACCCGTTCTTTGAAGGCGTGAACTGGGCGTTGATCAGGTGCAGCACTCCACCAGAAGTTCCAAGAGCAGTTGAATGTGATGTTGTAGCAGCAAAGTTTGAAGCAGTTGATAGTGTTGGGGTTGGCATGAACAATAGTAGTAAGAGGATGGGAGGTAATAATGAGATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAGTTTTTGATTCTTCAATCTACATATTTGTATTGTGTTTCTTCCATGTTCAGTTAATTTTACTAGAGATGCACAGTGCATCGTTATC