Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15604 LG4 9926186 9927488 PREDICTED: myb-related protein 306-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   negative regulation of photomorphogenesis, plant-type hypersensitive response, plant-type hypersensitive response, very long-chain fatty acid biosynthetic process, response to auxin, plant-type hypersensitive response, response to high light intensity, plant-type hypersensitive response, plant-type hypersensitive response, response to hypoxia, very long-chain fatty acid biosynthetic process, plant-type hypersensitive response, very long-chain fatty acid biosynthetic process, plant-type hypersensitive response, response to hypoxia, plant-type hypersensitive response, response to bacterium, response to bacterium, very long-chain fatty acid biosynthetic process, response to bacterium, plant-type hypersensitive response, negative regulation of photomorphogenesis, plant-type hypersensitive response, response to auxin, negative regulation of photomorphogenesis, response to bacterium
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   protein binding, protein binding, DNA-binding transcription factor activity, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding, sequence-specific double-stranded DNA binding, DNA-binding transcription factor activity, protein binding, protein binding, transcription cis-regulatory region binding
Pathway   B 09182 Protein families: genetic information processing   C 03000 Transcription factors [BR:ko03000]
SNP Position Effect Amino acid change
A/G 9926334 intron_variant
T/A 9926355 intron_variant
T/C 9926377 intron_variant
A/T 9926770 intron_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15604.1
MGRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWRTVPTKTGLSRCSKSCRLRWTNYLRPGIKRGNFTEQEEKMIIHLQDLLGNRWAAIASYLPQRTDNDIKNYWNTHLRKKLKKLQTGSEGSLGDSFSGSRQIPRGQWERRLQTDIQMAKRALSEALSPEKPSCLSGSNSNPSDSSSSFSSTKPPQSLCYASSAENIARMLKGWMKNPPKSSRTNSSVTQNSFNNLVAAGADTASSDAKGPNSVELSESFESLFEFHQSLESSNSDELSQSFSPEENKPDIGEIMPFSLLEKWLLDEAACQEKVGCGDAKFF*


CDS Sequence:
>Vu_15604.1
ATGGGAAGACCACCTTGTTGTGACAAAGAAGGAGTCAAGAAAGGGCCTTGGACTCCTGAAGAAGACATCATTTTGGTGTCTTATATACAGGAGCATGGTCCTGGCAATTGGAGGACAGTTCCTACCAAGACAGGGTTGTCAAGATGCAGTAAGAGTTGTAGACTTAGATGGACAAATTACCTGCGGCCAGGAATCAAACGTGGTAACTTCACAGAACAAGAGGAGAAGATGATTATCCACCTTCAAGATCTTTTAGGGAACAGATGGGCTGCAATAGCTTCATACCTTCCACAGAGAACGGATAATGACATAAAGAACTATTGGAACACCCATTTAAGAAAGAAGTTGAAAAAGTTGCAAACAGGTAGTGAAGGTAGCTTGGGAGATTCGTTTTCAGGATCAAGGCAAATTCCTAGGGGCCAGTGGGAAAGAAGGCTCCAAACTGATATCCAAATGGCAAAGAGAGCTCTCAGTGAAGCTCTTTCCCCAGAGAAGCCGTCTTGTTTATCTGGATCAAACTCAAACCCTTCTGATAGTAGCAGTTCCTTCTCTTCCACCAAACCACCTCAATCATTGTGCTATGCTTCGAGTGCTGAGAACATAGCTCGTATGTTGAAGGGTTGGATGAAAAACCCTCCAAAGTCCTCAAGAACTAACTCATCTGTGACTCAGAACTCCTTCAACAACTTAGTCGCAGCTGGTGCTGATACTGCTTCTAGTGATGCAAAGGGACCCAACAGTGTTGAATTGTCTGAGAGTTTTGAATCCCTGTTTGAGTTTCATCAGTCTTTGGAGTCCTCAAACTCTGATGAATTGTCTCAGTCGTTTTCTCCCGAAGAAAACAAGCCTGATATTGGTGAAATAATGCCCTTCTCTTTGCTTGAGAAATGGCTTCTTGATGAGGCTGCTTGCCAAGAGAAAGTTGGTTGTGGTGATGCCAAGTTTTTCTAA


Promoter Sequence:
>Vu_15604::LG4:9924186-9926186(+)
ATGCATCATCCCACTACTGTATACCTTATACAAGATGATGAATTCAATCAATTGTTTAGCCATGCATACACAGATCTTGACCCTTTCAAGTTTCTGATGGCTTTATTGATCATTATAATTTATGAGGACTACTTCAGTGTTCTGAATTTCAACCTTAATACATTTGTTTGGTATTTGTACTATAATTAGCTTGTATCAGTATTGTAACACTTTTAAAATCTACCTCATAGCGTGCAGATTGATCAATATATATATATAGATATAGATACACACTCAGTAATAAATGAAGTTCAGGCTTTTGAGTGAATTTTCTCTCAGGATAAAATCTCAACATATTTTGAAGTAACATGTTTGAATCTGGACTTTTGAAGAAGTCATCCGTATTTGTCTCCTCTCAATAACTCGTGTCCTTCCTGTTTGATGATGTCTCATTTTCAAACACCTTAGTTGTGAATGATTACGCAAACACTCATTTTACCATTTCGTATTTTACAATTAATATGATTTTTCATAAGAAATAAGCTATTTCATGTAATTAGTGACGGAATAACTTAGATAATTTGACATTGATTTATGCTTTAACTTATATTAGGTCAGGCTATACATACTTTTTAAAGTTATTTGGATTTTGATTTTGATTATTAAGAAGTATTGTAAGAAGTAAATTTATGAACTAATTGGAACAAAAACTTATGCCCTGTTAGAAAATCTTTTGTAATTTATAAAATAGATATTTTTAAATAAATTATTATAAAAGTCATCTAAACTAATTTATTTTCTTCCCCCCTCATGTATTGAATAATCATGAATTTAATTTTCATATTTTAAAATTTATTAAAACAGAATTTTATTCATCTAAGTGTTTGTCCATTAGCATATTTAAGGATATGTGACATCTATCTAATTTTTTAAAAATGAAATCAGGATTAACTGATTAAGTGATAATTTAAAAAATAAGTTAAAGTACTATAACTGAAAGCATATGATAAATAAGAAACTAGACTTCATTTAATTATTCTTTTAAATAAATACCAACTATATTTAAACAAGCTTTTATTGTAGAGCAATAGTAGAATGAAGAAAAAGAAATATTGTGTAATGATACTAATTAAAAGTGTATTAAACTATATTTTTTTTGTTTATTGTATCCAACCTTTTAACCCTATAGTTGTATTGTTTTCAAAACATGCATTAAATTTCTGGAATAAGATAATAAACGTACAACTTATCTAGAAACAAAGTACTCTAGCGGCTTATAATGTTCATTGCCCTAACACAAAATCCCCTTGTTGTACAACTCACTTTTCCACTTAAGCATAGAGACAATGTATATATATCTCTTGTTAGTTACAGCGACTGTCGAAAATATGAAAGTATAATTGAAATATAAATCCAATTTGTAAATTTAGAGATAAGTTATTAAAAGAAGAAAGAGGTGGTTCATTGAGATGAGAGGAAGTGAAGAAGACATAAATGTTGATAGCTTATTAGGTTTTGCAAAAGTCAGCTTTATCTCATATTAACATTTAATGTCTGCTGGGGTTTATGGACTTTTAAAGCTGAGATAATTGAGGTTTCCTAGTGCAGCTACATTGAATGCCACGCGGTTTTGAGAGGTACACCACATAGAGGTATTGCCCCAGCTATGAAGTGAATAATTTGGCCTTACTCCTTCAGTTAATGCTCTTGCTGTCAACTTTTGACTTGGCTTCCTCGTTTACTAGTTTAAGTCAGCTTCTCACACCCTCTCACCATACCTTTTAACCCTCTCATTTTAGCTATAAATGTACATCAAGCAAAGGTTTGGCTTGGACATATGCTTTAGATCCTATCAAGTAAAGAGGTAGGGATAGAGAAATAAGAAGAAAGATAATACCACCTCAGACGTTAGAGAAAGAAAGGAAAACGACCTATTTTCCTTTAGAGCTCAAGAGGCTATAGAAAATTAGAAAGACAAGCATAAAGGCGGTGAAATAAAAGAGAGAGACAAGAAGGAAACA


Gene Sequence:
>Vu_15604(+)
ATGGGAAGACCACCTTGTTGTGACAAAGAAGGAGTCAAGAAAGGGCCTTGGACTCCTGAAGAAGACATCATTTTGGTGTCTTATATACAGGAGCATGGTCCTGGCAATTGGAGGACAGTTCCTACCAAGACAGGTTACTTTGCCCTCCATTCAGTTTCATCATTTTTTGTATTGGTTGTTCTTGGGGTTATTAGATCATCATTTAGAATATTTTTTTTGTTCAAATAGAACTGTGATCTAAGTATTGGTCATTTGGTTTTGTTGTTCTATATAATTTCTTAACTCAGATCTGAATTGGTTTCTTTGGTTTTGGGATTTTGTTCAGGGTTGTCAAGATGCAGTAAGAGTTGTAGACTTAGATGGACAAATTACCTGCGGCCAGGAATCAAACGTGGTAACTTCACAGAACAAGAGGAGAAGATGATTATCCACCTTCAAGATCTTTTAGGGAACAGGTAAATTGATTCCAAGCACCTACTTAGTTCAAATCTTCAGCTTATGAAAACATTGAGTTTTGAAGATTTGTTTATTTTGAATTGTTTTGAGTATTTTGATTTGGGAAGTTCTTTGGATCCACAATCTTAACTTAACTGGAACACATTGGCCATGTTACAGATGGGCTGCAATAGCTTCATACCTTCCACAGAGAACGGATAATGACATAAAGAACTATTGGAACACCCATTTAAGAAAGAAGTTGAAAAAGTTGCAAACAGGTAGTGAAGGTAGCTTGGGAGATTCGTTTTCAGGATCAAGGCAAATTCCTAGGGGCCAGTGGGAAAGAAGGCTCCAAACTGATATCCAAATGGCAAAGAGAGCTCTCAGTGAAGCTCTTTCCCCAGAGAAGCCGTCTTGTTTATCTGGATCAAACTCAAACCCTTCTGATAGTAGCAGTTCCTTCTCTTCCACCAAACCACCTCAATCATTGTGCTATGCTTCGAGTGCTGAGAACATAGCTCGTATGTTGAAGGGTTGGATGAAAAACCCTCCAAAGTCCTCAAGAACTAACTCATCTGTGACTCAGAACTCCTTCAACAACTTAGTCGCAGCTGGTGCTGATACTGCTTCTAGTGATGCAAAGGGACCCAACAGTGTTGAATTGTCTGAGAGTTTTGAATCCCTGTTTGAGTTTCATCAGTCTTTGGAGTCCTCAAACTCTGATGAATTGTCTCAGTCGTTTTCTCCCGAAGAAAACAAGCCTGATATTGGTGAAATAATGCCCTTCTCTTTGCTTGAGAAATGGCTTCTTGATGAGGCTGCTTGCCAAGAGAAAGTTGGTTGTGGTGATGCCAAGTTTTTCTAA