Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15637 LG4 10287268 10288514 PREDICTED: NAC domain-containing protein 92
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   leaf development, formation of plant organ boundary, regulation of timing of plant organ formation, primary shoot apical meristem specification, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, primary shoot apical meristem specification, secondary shoot formation, primary shoot apical meristem specification, regulation of transcription, DNA-templated, leaf development, regulation of transcription, DNA-templated, primary shoot apical meristem specification, secondary shoot formation, primary shoot apical meristem specification
Cellular Component   located in   nucleus
Molecular Function   enables   DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, protein binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, protein binding
SNP Position Effect Amino acid change
T/A 10287399 stop_gained p.Cys44*
C/A 10287407 missense_variant p.Ala47Asp
T/A 10287441 synonymous_variant p.Pro58Pro
C/G 10287848 intron_variant
A/T 10287884 intron_variant
A/G 10287962 synonymous_variant p.Lys82Lys
G/T 10288034 synonymous_variant p.Ser106Ser
G/A 10288105 missense_variant p.Arg130Gln
A/G 10288156 missense_variant p.Asp147Gly

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15637.1
MENVYKPSKENQKLNLPTGFRFHPTDEELIKCYLTKKVADNCFCAVAIAEVDLNKCEPWNLPGKQNQYQYAKSEWVVCRVFEKSPSGRRLHVRRLNSSGNESSSPSSLLPPLMDSPPNNSETRTTAGELSRVISRDPNHTVDKKNTHDDIVESMETPILNLSSSATPFAVYPFGKPTLSVADQPAQIANQIGNSQYPDYCYMPQDQSLKMLMTGNHEPSAKQIQKAEFSDGREFDADIETMLENQEIHELMQGMWAPIACGITEEG*


CDS Sequence:
>Vu_15637.1
ATGGAGAACGTTTACAAACCAAGTAAGGAAAATCAGAAGCTTAACTTGCCAACTGGTTTTAGATTTCATCCAACTGATGAGGAGCTCATAAAATGCTACCTCACAAAGAAGGTTGCTGACAACTGTTTCTGTGCTGTGGCCATTGCTGAGGTTGATTTGAACAAGTGTGAGCCTTGGAATTTGCCTGGGAAACAGAATCAATACCAATATGCTAAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAAAGTCCTTCTGGGAGGAGATTGCACGTTAGGAGGTTGAATTCCTCTGGAAACGAATCATCATCACCTTCTTCGCTGTTGCCTCCTCTGATGGATTCTCCTCCTAACAACAGTGAAACAAGAACCACTGCTGGTGAGTTGTCTCGGGTGATCAGCCGTGATCCAAATCATACTGTGGATAAGAAGAACACACATGATGACATTGTTGAAAGCATGGAAACTCCTATTCTGAACTTGTCATCCTCTGCAACACCTTTTGCTGTTTACCCTTTTGGAAAACCAACCCTTTCGGTCGCAGACCAACCAGCCCAGATTGCAAACCAAATTGGGAACTCACAGTACCCAGATTATTGTTATATGCCTCAAGATCAGTCCTTGAAGATGCTGATGACTGGAAACCATGAACCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGATGGAAGAGAGTTTGATGCTGATATAGAAACAATGCTTGAGAATCAAGAAATTCATGAGCTTATGCAGGGCATGTGGGCACCGATTGCATGTGGAATTACTGAAGAAGGTTAA


Promoter Sequence:
>Vu_15637::LG4:10285268-10287268(+)
TGTATATATAGTATAGATAAACAGAAATAACATATTTGTTTTTTAAGTAACCGTGATAATATGTTATTATCATTTTATTACAATTGTCTATAAAGATTTATTGTTATATATAAATATAGGGTTAAATATGTTTTCAGTCCCTAAACTATTGGTCGTTTCTGGTTTTTGTCCCTGTTTCAAAGTAAGGTACAATTTGGTCCTCATTCTTTTCGAAACGTTCGTTTTAGTCCTCGAAAACTAAACACTGTTTAAAAATTTGGTCCTCATTTAGCAACAAATGAGGACTAAAACCAAAATTCCGAGGACTAAAACGAACGTTTTGAAAAGAATGAGGACCAAATTGTACCTTACTTTGAAAGAGGGACGAAAACCAGAAACGGCCAATAGTTTAGGGACTAAAAACATATTTAACCCATAAATATATAATGAGTGGTGAAATATTATTATTGTATATATATACAACTGTCAAACCTCTTTATTACATAAATATAAAATTCAGAAATATTTTATTATTTTACAAGTGTATAATTGTTGGTATAGAATTTCATCATTACAAATGTATAGATAAACAAAAAAATATATTTATTTTTCTTCTGCTCTAAGTAAGAGTGATAATATGACACCATCATTCTACTGAAATTGTGGGTGAAAACTTGTTGTTACATATAAATAAAAAATTGTCAGTGAAATCTTTTTATTATATAGATATACAACTGTCAGTCGAATATCATTATTACATTAATAATTGATGATTGATAACACTTCATCATTACACTGACAGAGATGACATTTGATTATACTGTAAAGTCGCCGAATTTTGAGAAAATAAAGTAACTTTTAAAACTAAAATAACTCTTTGTAGATATCCGAAATTTTAATTTTGTAACAAATAATTAAAGTATTCTTGAAAAAAAGTTAAAGTTAAATTTCTATCTTTAACTTCTTGTATCATGTTATGTACGTTAAGAAATGTAGAAATGACTATAAATAATTGAATCATCTAACATCTACAAGCACAGTGTTTTGAGTTCTGTTCCTTTATACGGTATAAGCATGATCTTATCCTGTATTCAGAGTTGCAGATATTAAGTAAAGCCACTAACTCATTTTTCTTTCTGTTTTTCTATTTTGTTATTGGTATTGTGTTGCAGTGTTTGGTTTATAAACAAAGAAGGTAAATAAGTTGAAGAGCATAGGAACGTCAACATTTACCAACAGGCTAAATTGGTGACTGGTGACTCTGTGAGGTGTTCTTAGCAATCATAGAAAAGGAAACTCTACACAATTTGTTAAGGTACGAAAATCATTATAAAGTGAAATCAACTTCTAATCACTCTAAAGATTAGGTTGTTTTCATGTCCAATTCAATTTTTAGCCCCTTGTTAAACACGATGTTTTTGGGATAAAATATGTTTTAAAGATATAAAAGCAAACTATATAATTTTAGAAAGATTGAGAAGATGTTTATTATTTTACTATTCGTCACGCCTTTTTTCTTTTACGGAAATAAAAAATGATTGTTTTTACTCATGATTTTCACCTTTCAACTTTTGAGTACTCAATCATGTACATATGCAGGCATGAAGGCTCCCAGTTACTTGTCAACAGTGGTTATGAATACCCACAAAAACCTGTATTTAAGGAGTTTGTTTCTTTTGTGCACAATTTTTCCTTAACACCATATTCATCAAATTCCTCGAAAAAAAAAAAAAACTTTTTGTTCATTCCCTCTAGTCACTTTCCCCTTTAGGTTACATAATTCACAATCAAATGCAGAAAATTTGTAACCCCTCAAAACCCAAAACCTTTGTTGTTTTTTGTTCTTGCAACTAAGACAATAGTGTTCCTTATTTAACAGAGTGGTCGGTTCCCTTGATTCACCTGTGTTTGAGAATTGAATGTGTTCTTTGCGTGAGCACACAAATTTACGAGTTTGTCGTGTTCTGTTTTTCATTTGCTTCTTTGATGAAACAGGGGATTTTGGTTTGGGATTGGATCAA


Gene Sequence:
>Vu_15637(+)
ATGGAGAACGTTTACAAACCAAGTAAGGAAAATCAGAAGCTTAACTTGCCAACTGGTTTTAGATTTCATCCAACTGATGAGGAGCTCATAAAATGCTACCTCACAAAGAAGGTTGCTGACAACTGTTTCTGTGCTGTGGCCATTGCTGAGGTTGATTTGAACAAGTGTGAGCCTTGGAATTTGCCTGGTGTGTCCATCACTTCATTTCATTTCTTTTTTAATTGAATTCTTGTTGTAGCTTGCTTTGACAGTGAATTGATGATGCCTTTTTACAATCATGTTTGGTTTTTGAAGCATTGGCTAAAATGGGGGAAACTGAGTGGTATTATTTCTGTGTGAGGGACAAAAAGTACCCAACTGGTTTAAGGGCTAATAGGGCCACTGAGGCTGGTTATTGGAAAGCCACAGGAAAAGACAAGGAGATAATAGCGGAAAATGCACTCATTGGGCTGAAGAAAACCTTAGTTTTCTACAAGGGAAGAGCTCCAAGAGGTGAAAAGACAAACTGGGTTATGCATGAATATAGGTTGGAAGGGAAACAGAATCAATACCAATATGCTAAGGTATGATTTATTACATGCTCTCTTTTTTGTTTACTTGAAAACTTCATTAACATATGTTAATTAAGGTTGTTTTGTTTTGAAATTTCCCCCATTTTATAGAGCGAATGGGTGGTGTGCAGAGTCTTTGAGAAAAGTCCTTCTGGGAGGAGATTGCACGTTAGGAGGTTGAATTCCTCTGGAAACGAATCATCATCACCTTCTTCGCTGTTGCCTCCTCTGATGGATTCTCCTCCTAACAACAGTGAAACAAGAACCACTGCTGGTGAGTTGTCTCGGGTGATCAGCCGTGATCCAAATCATACTGTGGATAAGAAGAACACACATGATGACATTGTTGAAAGCATGGAAACTCCTATTCTGAACTTGTCATCCTCTGCAACACCTTTTGCTGTTTACCCTTTTGGAAAACCAACCCTTTCGGTCGCAGACCAACCAGCCCAGATTGCAAACCAAATTGGGAACTCACAGTACCCAGATTATTGTTATATGCCTCAAGATCAGTCCTTGAAGATGCTGATGACTGGAAACCATGAACCAAGTGCAAAGCAAATTCAGAAAGCAGAGTTTTCTGATGGAAGAGAGTTTGATGCTGATATAGAAACAATGCTTGAGAATCAAGAAATTCATGAGCTTATGCAGGGCATGTGGGCACCGATTGCATGTGGAATTACTGAAGAAGGTTAA