Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15807 LG4 11893907 11896379 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   regulation of flower development, regulation of flower development, regulation of flower development, regulation of flower development, regulation of flower development, regulation of flower development, regulation of flower development, regulation of flower development, chloroplast organization, regulation of flower development, regulation of flower development
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
Molecular Function   enables   zinc ion binding, DNA-binding transcription factor activity, protein binding, DNA-binding transcription factor activity, protein binding
SNP Position Effect Amino acid change
A/T 11893987 3_prime_UTR_variant
T/A 11894125 3_prime_UTR_variant
A/G 11894200 synonymous_variant p.Ile346Ile
A/G 11894539 intron_variant
A/G 11894548 intron_variant
T/A 11894759 intron_variant
A/T 11894785 intron_variant
T/A 11894820 intron_variant
C/T 11894822 intron_variant
A/G 11894904 intron_variant
T/A 11895084 intron_variant
T/A 11895115 intron_variant
C/A 11895153 intron_variant
A/G 11895292 upstream_gene_variant
A/T 11895423 upstream_gene_variant
C/T 11895505 upstream_gene_variant
G/A 11895602 synonymous_variant p.Gly219Gly
C/T 11895841 missense_variant p.Gly140Ser
G/A 11895843 missense_variant p.Thr139Ile
A/G 11895905 synonymous_variant p.Asp118Asp
T/G 11895974 synonymous_variant p.Arg95Arg
A/G 11896013 synonymous_variant p.Asp82Asp
G/A 11896050 missense_variant p.Ala70Val
C/G 11896097 missense_variant p.Trp54Cys
G/T 11896190 synonymous_variant p.Thr23Thr
C/G 11896236 missense_variant p.Gly8Ala
G/T 11896368 5_prime_UTR_variant
C/A 11896377 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15807.1
MLEGEAAGTWARACDTCRSAASTVFCRAHNAYLCASCDGRVHHASSSSWHERVWVCEACERAPAAFLCKADAASLCSSCDADIHSANPLASRHHRVPILPIAAGHHSHVEIDVADDDDGADVDDEDETASWLLLNPVKTGTVPNSNNNGFLYSGEVDEYLDLVDNCNSCGDNNHFAATTTTATTADHYTQHHHFDGVSQKSYAGDSVVPVQQHHHFQLGLEFENSKAAFSYNGSITQSISVSSMDIGVVPESPMRDVSISHTRPPKGTIDLFSGPPIQMPSHFSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMFSTTLITEVGYGIVPSF*


CDS Sequence:
>Vu_15807.1
ATGTTGGAGGGAGAAGCTGCTGGCACGTGGGCACGCGCGTGCGACACGTGCCGCTCCGCAGCCTCCACCGTCTTCTGCCGCGCCCACAACGCCTACCTCTGCGCCTCCTGCGATGGCCGCGTGCACCACGCGTCCTCCTCCTCTTGGCACGAGCGTGTGTGGGTCTGCGAGGCCTGCGAACGGGCCCCCGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCTCCTCATGCGACGCCGATATCCACTCCGCGAACCCTCTCGCAAGCCGCCACCACCGAGTCCCCATCCTCCCCATCGCTGCCGGCCACCACTCTCACGTCGAAATCGACGTCGCCGACGACGACGATGGTGCTGACGTGGATGACGAAGACGAAACCGCTTCCTGGCTCTTGCTCAACCCTGTCAAAACTGGCACTGTCCCTAATAGCAACAATAATGGGTTCTTGTACAGTGGTGAGGTTGACGAGTATTTGGACCTTGTTGATAACTGTAACTCTTGTGGTGACAACAACCACTTCGCTGCAACTACCACTACTGCCACTACTGCTGATCATTACACTCAGCACCATCATTTTGACGGTGTTTCTCAGAAGAGTTATGCCGGGGACAGCGTGGTTCCGGTTCAGCAGCACCACCATTTTCAGCTTGGCTTGGAGTTCGAGAATTCTAAAGCTGCCTTCAGTTACAATGGTTCTATTACTCAAAGTATTTCAGTTTCATCAATGGATATTGGTGTTGTACCTGAATCACCGATGAGGGATGTCTCAATTTCCCATACAAGACCCCCCAAAGGGACGATTGACCTATTTTCTGGACCTCCCATTCAGATGCCTTCCCACTTTTCTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTACAGAGAGAAAAAGAAGACAAGAAAATTTGAGAAAACTATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACCAGACCCCGAATAAAGGGTCGTTTTGCCAAGAGAACAGATGTGGAAGCTGAAGTGGATCAGATGTTCTCCACAACACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGA


Promoter Sequence:
>Vu_15807::LG4:11896379-11898379(-)
TTAGTGGTGGTTGAATATTTTTGGAATTGAATTTTTTGTTATTTGAAAAGAAAGATTCACCTACAAAGAGTATCTTATGCTCAAGTAAAAACTTTGATGATCTTTATGAATATAATATAGTGAATATGAGTGACTACTAACCAAATGTATTTATAAAATTAATATCAGTTGTGAATCTATGTTATTATTGGATTGTCTTAAGTATATAATAACATTAGTTAATAATAACACGATGATAATATATCTTAAATAATAATCATAAAATCAAATTTTTATTAATTGTGACATATAGATATTGTCTTAATAGATATACATATATCTAATATTGTTCTAAAATTAAAAGATTTAATAAATTTTGTTGAATTGTATTATTTAATATATTTATTGGATCGAGTAAAAATAATTGTCAATTACCTTTTATAGTTGAGTGTTAGAGGTAGAAGGAGATATAATTACGAAGGAGAACATAATTAAGTTAAAATAAAACATAAGTTAAAAAACTTATAAAATTGTAAATTATAGAATGATGGTAGATTTTACTTTTACGTGTGGAAGAATAAAGAGTTAAGTCGTGTTTGGTTTGAGATTGTGAATAAAGCAATGAAAATATTTACTCATATTCATCTCCATTTTTTCACTGGAAATAGTAGAAAAATGGCATAAATAAACAATAAAAAACACTATTAATGAGGATAGGAAGGAGATGACGTATGGGAGTACGTGATGGTGAGATTGAAGAATGAGCAGTGAATAAAATATGAAGCAAATGTTAAATATTCTAAGTTCAAACTTCATTCAATTCAAGTACATTATCTCTAACACGTGGCAGGCCCAACCTCTTCATTTTAATCGTGACTAATTCCACTGCTAGACAACCCCTTTTTCCTGCAATATATTTATTACATATATCAATTCTTTGTAAACGAGATTTATCAGAAAGAGGTGATGAAAGAATATATTAAGAGAATAAGTATAAATTAAAATTGAGAGATGATTAATTATATAAAGAGATGGTTTTATGAAATTGAAAACGATGTTACATTTTTTTTTAATTTAATATATTTAAATAATTAATTGTAAATAATTTCAAACAAAATTTCCCGCATACCAATTGCAAAAATTAAAGTATAGTAAAAAAGAAAAAGAAAAGTGAGAGTGAATATAAAATCGAAGGAAATTTTTGTAACACACTTCACCTTTGTTATAAAAAATAAATCAGTTTGAGATTAAATTATATTTCAGTGTATATAATCTCATTCAAATCTATGTTCTGCTGAAGGAATCATATGCTGAGATTCTTCATAATCCAGCTTTAAATAAAAAATGTTCATGGTTAAAATTGCACGTTAGTTGATTAATTCTTTGAAACGTAAAATTAGTCAAATTTATTGTACATGTAAAAGTAAAATTGTAACTTGAAACAGTTCAAATATCTATGTATATATGAACAGCAGATAGTGGAGACAATCTCTTCCAACATTCTCCTCTTTTTTCTCCTTTCGTGTTTCCATCCAATTAGCACATCCAATTAGCACAAAAAGATCAAGATGATTCGCATCTTCAATCGTCCTAAAGGAAATATAACCTTAAAAATATTAAATTTTTATCTCACAGATTCATTTCATGCAAGATTATATAGTAAAAGAACATGGTTATATAAAAGTATGGGTAAACTTTATATATTTATGAATACTAATAAAAAAAACTTATTTTAATGTTACCTTAAACTTTTTAATTAGTTTTCATTTTAAAAAAATCAAACTTTATAGTAGAGTGGAGTTACATCAAGATATTGCAGTATATTATATTCCAAAAGGCAAAAGAAAAGGGGAGAGAGAGTACCACCTTCCCAAACCCTATAATGGGCCCACCTTAAAGCACAGCCACCCACAAGATAGATAATGTCCGAACTTTTTGACACCACTATCTTTCTGACACGTGTCACACAGAGATTCTCCCACTCTCTCAAAGCCACCAAAAACAGCAAAACCCCGTTCACT


Gene Sequence:
>Vu_15807(-)
GCGTACACAAACACACAAACACAACACAACTTCGTAAGTTCTCAGTTTCTTCCTTTTCTTTTTCTAGTTCTCACCGAAACGGTATACTAAACTCACTCTGACAAAACTACTAACTCCCCAAATGTTGGAGGGAGAAGCTGCTGGCACGTGGGCACGCGCGTGCGACACGTGCCGCTCCGCAGCCTCCACCGTCTTCTGCCGCGCCCACAACGCCTACCTCTGCGCCTCCTGCGATGGCCGCGTGCACCACGCGTCCTCCTCCTCTTGGCACGAGCGTGTGTGGGTCTGCGAGGCCTGCGAACGGGCCCCCGCGGCGTTCCTCTGCAAGGCCGACGCCGCCTCCCTCTGCTCCTCATGCGACGCCGATATCCACTCCGCGAACCCTCTCGCAAGCCGCCACCACCGAGTCCCCATCCTCCCCATCGCTGCCGGCCACCACTCTCACGTCGAAATCGACGTCGCCGACGACGACGATGGTGCTGACGTGGATGACGAAGACGAAACCGCTTCCTGGCTCTTGCTCAACCCTGTCAAAACTGGCACTGTCCCTAATAGCAACAATAATGGGTTCTTGTACAGTGGTGAGGTTGACGAGTATTTGGACCTTGTTGATAACTGTAACTCTTGTGGTGACAACAACCACTTCGCTGCAACTACCACTACTGCCACTACTGCTGATCATTACACTCAGCACCATCATTTTGACGGTGTTTCTCAGAAGAGTTATGCCGGGGACAGCGTGGTTCCGGTTCAGCAGCACCACCATTTTCAGCTTGGCTTGGAGTTCGAGAATTCTAAAGCTGCCTTCAGTTACAATGGTTCTATTACTCAAAGTGTAAGCCTTTCTAATTCCCTTCTTCTCTTTTCTCCTTTGGGGTTTTGTTTTGTTTGTTCTTTTGTTACAAACACGTACAAAATATGAGCACTTTTTTCAGAATTTGAACTGTACTTGCCCTTCTACTACACCTAACTCTCGTGGGTGGTTTACTTTTGTATTGTTCTTTCATGTAAACCTCAAATTCATCTAAACCAAGCTATTGGGAGGGGGAAAGTTGTGCTTTTTATTTGACTTCGGTTGTGGTATATATTATACCACACGGTCCTTTTTGAGATGGAGTTTTCTTCCTTTTTCCCTTCACGTGACATGTTTTTTTGTCAGAGTTTTGGATTCAGAAGTAGTTTCCTTTCCTGGCATGTCCAATGCCAGCTTTAACTCTCTGGAAGAAGTTCCTGTTTACCCTGTTTTTGGCCTGGGGTATCTCATAATCTGTCTTGTTGGACTGTTTGCCATTAATAAGACTTGTTCCCAGCTCGTTTTTCATGTTTGGTTTAATTTGTACAGAAATGGTGTCTCGATTCGTTCTGCAACTTTTTTGGCTCTCTTTATCCTTTTGCCTTTACACTTTTTCTTTATTGCAACGAATCTAAGGGAAAATTAAGTATCATACTTTCTTTCTATGATAAGATTGTTTTCCTCAGTAAACAATTGAAAACTTTCTGCCTTTTTATTCTACTAAATGTTAATGTGAGAATGGATCAATTTTCTATGTCATATATGCATGCAGTTGCCGTTCTCTCACTTTAATCTATTCTGTAGTACACTCCGTTATGTCCTTTGCCAAGGAGCAAACAAGTTCTGTCACGGACTTGTTCTAAAGCGCTAAAAGTCATCCCTCTAGATTCTCGTACTTTTGTAATCTCAACCAGTTTTTACATGAACATAGGAATATTAATCATATTCATCAATTTTCTAACCTACATAATTGGATTCCTCTAAAGGTGTTGTTTTTATCTTGAACTTGTTATCTGGTGAACATTGTTTAACTGGTGTTTGCTTCCTTTTTCATTGAATTCAGATTTCAGTTTCATCAATGGATATTGGTGTTGTACCTGAATCACCGATGAGGGATGTCTCAATTTCCCATACAAGACCCCCCAAAGGGACGATTGACCTATTTTCTGGACCTCCCATTCAGATGCCTTCCCACTTTTCTCCAATGGACAGGGAGGCCAGAGTCCTAAGGTACAGAGAGAAAAAGAAGACAAGAAAATTTGAGAAAACTATCAGGTATGCCTCAAGGAAGGCCTATGCAGAGACCAGACCCCGAATAAAGGGTCGTTTTGCCAAGAGAACAGATGTGGAAGCTGAAGTGGATCAGATGTTCTCCACAACACTAATTACAGAAGTTGGATATGGAATTGTTCCCTCTTTCTGAATATGCTGTGTTGAACAAAAATGACCACAAGACAGAGAAGAAGCCAGAGGATCTTGATCAATAGAAATGGCAACCGCTTATGTACTAAGTTGTTTTGTTGATAATGTATTTTTTATGTAATCTAATTACTCCAAGTTGCACTAATCGGATGCTTTTATTATTTTGTTTACTGTATTTTGAATGAAACTTGTATTTGTAAATACAGTCCTTGTATTAAATTATAGTCAACATATCTTTCATAAATTTTCATTTTCTCT