Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15841 LG4 12264818 12268306 PREDICTED: ethylene-responsive transcription factor ERF113-like
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   glucosinolate metabolic process, response to abscisic acid, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, response to salt stress, response to abscisic acid, glucosinolate metabolic process, positive regulation of transcription, DNA-templated, response to water deprivation, cellular response to freezing, response to ethylene, cellular response to freezing, response to salicylic acid, response to jasmonic acid, positive regulation of transcription, DNA-templated, cellular response to freezing, response to jasmonic acid, response to water deprivation, glucosinolate metabolic process, response to water deprivation, response to salt stress, response to ethylene
Cellular Component   located in   nucleus
Molecular Function   enables   transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding
SNP Position Effect Amino acid change
A/G 12264883 3_prime_UTR_variant
C/A 12264916 3_prime_UTR_variant
C/T 12264933 3_prime_UTR_variant
C/G 12264997 3_prime_UTR_variant
C/T 12265001 3_prime_UTR_variant
T/C 12265089 3_prime_UTR_variant
A/T 12265096 3_prime_UTR_variant
A/G 12265105 3_prime_UTR_variant
T/C 12265119 3_prime_UTR_variant
C/T,* 12265246 synonymous_variant p.Gln196Gln
C/A 12265255 missense_variant p.Gln193His
G/T 12265269 missense_variant p.Gln189Lys
C/T 12265270 synonymous_variant p.Gln188Gln
A/T 12265378 missense_variant p.Asp152Glu
A/G 12265381 synonymous_variant p.His151His
G/T 12265398 missense_variant p.Pro146Thr
T/C 12265462 synonymous_variant p.Ser124Ser
G/A 12265483 synonymous_variant p.Phe117Phe
T/C,* 12265648 synonymous_variant p.Lys62Lys
A/G 12265729 downstream_gene_variant
C/T 12265734 downstream_gene_variant
G/A 12265772 downstream_gene_variant
A/C 12265803 downstream_gene_variant
A/C 12265831 downstream_gene_variant
C/T 12265872 downstream_gene_variant
G/C 12265922 downstream_gene_variant
G/A 12265923 downstream_gene_variant
A/C 12265956 downstream_gene_variant
A/G 12265964 downstream_gene_variant
A/G 12265973 downstream_gene_variant
G/A 12265989 downstream_gene_variant
A/G 12266014 downstream_gene_variant
A/G 12266021 downstream_gene_variant
A/T 12266034 downstream_gene_variant
A/G 12266037 downstream_gene_variant
G/A 12266073 downstream_gene_variant
G/A 12266324 downstream_gene_variant
T/A 12266511 intron_variant
A/T 12266518 intron_variant
T/C 12266568 intron_variant
G/A 12266573 intron_variant
T/C 12266617 intron_variant
C/A 12266635 intron_variant
C/T 12266678 intron_variant
G/A 12266854 intron_variant
C/A 12266910 intron_variant
G/T 12266919 intron_variant
T/C 12267001 intron_variant
T/A 12267191 intron_variant
G/T 12267192 intron_variant
A/C 12267388 intron_variant
G/T 12267399 intron_variant
C/A 12267401 intron_variant
T/A 12267419 intron_variant
T/A 12267422 intron_variant
G/A 12267431 intron_variant
G/C 12267738 intron_variant
A/C 12267812 intron_variant
A/T,* 12267932 intron_variant
T/G,* 12267938 intron_variant
T/G 12267939 intron_variant
T/G 12267940 intron_variant
T/G 12267944 intron_variant
A/G 12267960 intron_variant
G/T 12268068 missense_variant p.Pro28Thr
T/C 12268075 synonymous_variant p.Thr25Thr
G/A 12268096 synonymous_variant p.Asn18Asn
G/A 12268238 5_prime_UTR_variant
C/A 12268282 5_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15841.1
MSAMVSALAQVMATANQNPPISQSTSFPLSNFHTKDQPQPSSDKGVTKKPHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAALAYDKAALKFKGTKAKLNFPERVHHNVSFMHQHQPSSNTSNTFAASQSLSSVDVSAPPSFSTHDQPGHQLFPNLLQYAQILSSDDAQFPYYTSHLFNQQQQQHHQQQQQQQDPFSSQFSTTSSQASYFYNHQQQFDEQGHDHSPQ*


CDS Sequence:
>Vu_15841.1
ATGTCTGCAATGGTTTCAGCTCTTGCTCAAGTTATGGCAACTGCAAATCAGAACCCTCCCATCTCACAATCAACATCTTTTCCTCTCTCAAACTTTCACACCAAAGATCAACCTCAACCTTCTTCAGATAAAGGAGTGACAAAGAAGCCACACTACAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCAGAAATCCGTGACCCTAAAAAAGCAGCAAGAGTGTGGTTAGGAACATTTGAAACAGCAGAAGATGCAGCCCTTGCATACGACAAAGCAGCACTCAAGTTCAAAGGCACAAAAGCAAAGCTTAATTTCCCAGAAAGAGTTCATCACAATGTTTCTTTCATGCACCAACACCAACCTTCATCAAACACATCAAACACTTTTGCTGCCTCTCAATCTCTTTCTTCTGTTGATGTTTCAGCTCCACCCTCATTTTCCACACATGATCAACCTGGCCACCAACTTTTTCCAAACCTCCTTCAATATGCTCAGATTCTTTCAAGTGATGATGCACAGTTTCCTTACTACACATCCCATCTTTTCAATCAACAGCAGCAACAACATCATCAGCAGCAGCAGCAACAACAAGATCCTTTCAGCTCTCAATTTTCTACCACCTCTTCTCAAGCATCCTACTTCTACAACCACCAACAACAATTTGATGAACAGGGACATGATCACTCACCCCAGTAG


Promoter Sequence:
>Vu_15841::LG4:12268306-12270306(-)
AGTGTTCATAAAAATTGATGGATGTACTTATGGAACTGTGTCAGTGTCAAGTTAACATCACCAAAATATTTGTTATAATCTTTAATTATAATCATAATCTTGTATGTTGTCTTCTTCTTCCTTGTGTAATATATATTCATTGTCTATTTCAACATGACAGAAAACCTTCGTGTTTTATCTTATGGTTAAATGTTTAGTTCTTGTAAGCTTCACCCTTTTAAATAGTTAATTGTGGTGAAAGAATTGAATGTTTGTTTATACTGTCATTTGTGGCTGTCGTATAATTAAAAATTATTAATTTTTTAATAGTAGTTACTTTAAATTTATATCTAAGATTTTTTAATTAATCAACATTGTAGAAAATATTAAAATTAAATTCCACCTTATTACAATTGAATTTACAAAAAAAAAAGGGTGAAGTGATAAGTAAGTCTTCTCATAATTATGAATCAAATGTTTGGAAGAACCCAAAAAAGATTATTTCAAAAAGTCAATTATATATAATTATTTAATTAATAGTTTTATAATTAACTATACATAATAATACTATTAATAGTGTTATTAGATGGTTAATTTTATTTCAAATCAACAACACATGTATAACTTTTACATATTAAGTTCCAGAAAGTATAAGGCTGAAAACGATAAAAAAAAACTGTTGAAAGTTTTGGAAGTAATTTTTGAAGAAAATATTTAAAATAATTATTAGAAACTAAGTATTAATTTCAAATTTTCAGATGGATAAGAACAACTTGTTTAAAAAAATGTATTTAAAAAATTTAGCAGTCATCCCAATTTGTCAATAAAATTTTTCTAAGAAAAATAGATAAGAGTTATCCCAAACATGCTCCGCAGCTAAAAAATTTTCTATTTTAGTTTTTCAAAAAGAACATATATTTTACTAAATTTCATGAGTTTTTTTTTTTTGAAATACCAACTAAAAGTTGATAAAAAAGAATTCTTAAATAAAAACTAAGTTTTAATCCTTCAAAATGTATTACTAGTTTTTCTCATCAATTTTCCTTTTTCCTTCGAAGAAATTTTTGTTAAATTTTGTTAGCTTCGTACATATATCTTTTACATGAGTTATAATATAAAAATAATTTTTATTCCCTATCCAAAAAAAGTTAATTATTTAAAAATAATTTTTAATAAATACAAAAAATGGTTATTAGTTCTAAAATCTATTAACCAATAATTAATATTAATTATGAAAATGATAGAGATGAAGCATCCTCAAATTGATCCTACAAATTGATAAAGGTGTTGAAAATCTGATCTACTAAAAGGAAGAAAAAAAAGAAGAAGAGAGATGTGTCTTTGTTTTAGCCACTTATAACCATGTCACTGTCATTATTCTTTGAATGTTATGAAGCCACTTGTTCCAAACACAATTGGTGTAGAAGAATATGGCAATAGATATGGATTTGGTCTACAAATTTCATAACTCAGAACTTACACGTGTAAAAAAGAATGTCATTCAAACATTTACTACCATAAAGTGAACATCCTAAACCAAAAAAAAAAAAAAAATTTAACATTATAGCTCAAACAATTTATTACTTTGCCATGAATTTTAATTTTACATTATTATGTTTAAGAAAAACATTAAGTAGTAGTATTTGTACCAATATAAAGAGACCCATCTTCGAAAAAGAAGAAATTATTAAAAATTTAAATGTGAATCTAAATTTTATATTGAGTCTTTGAATAAAAATATAAAAAAGAATAACATATAAAGATCTATTAATTTATTATTTTAAGATTGTAGACAGATAATAGTGTCATTATTTTATATAGTTAGATTTAGATCTTACTGTTATATGAGTTTATGATAACTAATTGCATTCTGAGAGTAAATCATGGTTAATAATGAGAAAAAAGAAAGTTGAGGGAGGAAAAGTTGAATAGATATATATTTTTTTACTTGGTTATGAGCCCTTAAATTTGAGTGGTCTAAGAGGGTTATTATATAGAAGCATTGACATGACCAGAAGATC


Gene Sequence:
>Vu_15841(-)
ATATCTGAGAACATAAAGAGCATAGAGCAGAAACCTAAAAGTGGATCCAAGAAGGCATGGAAAACTACCACTATCTTCAGAAACATCAAAGGAGGAAGAGAAAGACGACACAGTACAAGAATTTGATGCTTATGCATCATGGTCTTCGGAAACCGACATGTCTGCAATGGTTTCAGCTCTTGCTCAAGTTATGGCAACTGCAAATCAGAACCCTCCCATCTCACAATCAACATCTTTTCCTCTCTCAAACTTTCACACCAAAGATCAACCTCAACCTTCTTCAGATAAAGGTCTGCAAGCTTTCTTAACTTATTTCAATTCATCATTTATGTATATATATGTCATTTCTTGAAAAACAAAAAAAAAAAAAAAACTAACTTTTTTCTGTCTTTAAATTCCGATTAATGGAAATGGTGCATCTTTGGATGTCTTATGTAGAATCAATCTGTTTTAAATCAAAAAAGTAAAAGAATCCATTTTTTGGTGTAACATTCTGATCTATCTTTCCTTGTTAAATTCAAATGAGTATATACTTATAATTATATGAAATGTCACGAACAACGATCTGCGATCTTTATTTGTTGACTTGAAATTTTTTTCGAAATTACACTGTATTTTGAAAAAACAGGTTAGTTTTCATGATTTTATTTATTTTGATGTTATATAGTTCTGGTATAGCATGTTTATGAACCACTATAGCTATTGTAAAAAAGCTTTACTAATCCTTTTTTAATTATAGTAAATATAATTTTAAATAATCACTGTCTATCAACTTTGAGATTAACATTCCAAAATTAATAATAAAAATTCAAAAATCAGCTATAAATTATAACATAGATTCATATAGTAAAACGTTAAAAACCTCATTTAAATAACAATAATAAAAAAAAAACTAAGTCTAGCTTGTCATCGAAATAATGAATAAACTTTCGGTGATCGACACGTTTTAGAAAAATAAAATGAGAAAAATGAAACCTCAGAATGACAAGGTCAGCATAAGTGGCATGTGGACAACTTAGTCAGTACAGATATTCAATGCATGAGTCTGTCTTATATCAAGTTGTCGTGGTTTTTCTTCTTTCTTCTTATCTCATCTTTGACCAATGCCCAGAACCACACATCAACAAGAACTAAACATATAAGAATTTCTTCACGTAACAGAATAAAATACATATCATATTTCTGTTCCCATGATTCATATACGTCACACATTGCATGCATAATTCTTAGAACTTTTAATTTGAATTTCGTTATACATTATAAATATCAAATTAAAAATGCTTTAATATTGAATATATCTGCATAATTTGACAAGTTTTATGCAGTGGGGAACATAAAATCTACACCTACCTTGCCTACCTTAGCATAGTTACATCGGAATTTGCATCAAACATTTGATATGGTCTCCTTTTTTTTGAAGTTAAGACAATTCTTTTATAATCAATTACATTACTATAAGATATTGTGTTTCGAAATGGCTCCACCCCACCTTTATAATTGCATGTTCTGTTTCCAGATTCGGCCTTGTAGAAATAAATAACTTAATAAATTTCAAACTCTCTTTTTTGGTCTACAATGCCTCTTTATAGGGTTTTAACCTAAAACCTACATCCTCTCCCACTAATCTTGAATAGACTAGGGTAGGTTAAGTTTGAGCTTTTTTCTTACCATGACATAAGAAATTAATTTATTTTATAAACCTAATATATCTTATTATTATAACTCTCAATATGCTTGTAGTTTGTTTGTCATTTTTTTTCTGAATTTTTTTTAATAAAATTAATAGATTTCAATTATTTTTATTTTACTTATTCTAAAAATAAAATTTTATATTTTAAGCTTCTTGCTAGAATATATATATATATATATATATATAAGTGTGAGTTAAGATATTTAAATATAAGTATAAATTTCACGTGCAAAAATATCATAATTTTTCGATTTAAGTGTGAATTAAGATAGTCAAATGTAAATATAAACTTCCCATGTAAAGATAGAAGAGTTAAACATTATATAAAAAATTTTTGTAATTCATAATTTTAAGATTTTGAGATGAAATAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGAATTTGTTAACTTGCATAACCTCTTAAAGTATACTAAAATTTAATTGACAAAAATATCTTCATATATTATAGATTTTAGAATATTTGAATACTTTCTTATTTTTTATTTATTTTCATTTTAAATTTATAATAAAAATTATTAAAATATTTTTATATTTAAAGTATGTCTTTTTTAATATATGAAGATATTTTTGTCAACTAAATTTTGATATATTTTAAGAGGTTATGTAATTTAGCAAAACTATATATATATATTTAAAAGTCCCATCACTTCCTTAAATAATAGATAGTTTTGAACTTATTTATCTTGCATTTGACCAGCTTCATCCCTTACATTATTTAATAAAATAAGTTAATAGCATGATCAAATAAAAAAATTTAATATTTTATGATTATTTTATCTTTATATTGTATACGAAAAGAAGGTAAAAATGTGTCATTCTATCTTTATTCGTGATTGAATGGTTTGTGTGTGATGGTAACGAAGGAGTGACAAAGAAGCCACACTACAGAGGAGTGAGACAGAGACCATGGGGAAAATGGGCAGCAGAAATCCGTGACCCTAAAAAAGCAGCAAGAGTGTGGTTAGGAACATTTGAAACAGCAGAAGATGCAGCCCTTGCATACGACAAAGCAGCACTCAAGTTCAAAGGCACAAAAGCAAAGCTTAATTTCCCAGAAAGAGTTCATCACAATGTTTCTTTCATGCACCAACACCAACCTTCATCAAACACATCAAACACTTTTGCTGCCTCTCAATCTCTTTCTTCTGTTGATGTTTCAGCTCCACCCTCATTTTCCACACATGATCAACCTGGCCACCAACTTTTTCCAAACCTCCTTCAATATGCTCAGATTCTTTCAAGTGATGATGCACAGTTTCCTTACTACACATCCCATCTTTTCAATCAACAGCAGCAACAACATCATCAGCAGCAGCAGCAACAACAAGATCCTTTCAGCTCTCAATTTTCTACCACCTCTTCTCAAGCATCCTACTTCTACAACCACCAACAACAATTTGATGAACAGGGACATGATCACTCACCCCAGTAGGTTTATTTTGAAAGTCTTGATTAATTTGTAATGGTTATTGCAATCGTGACATCAAAGTTTTGAAAGTCTTGATTAATATTGACCCCATCATCAGCGTTAGGTGTCCACAAGATTTTTGAGATGTGTAACCGTGAGGATAATTTTTAGTAGTGTGTGTTTGGATATCAAAATTTGCTGTTGGAAGTTTGAATTTGCATGGGCTTTAATCCAAACATGGCTTGAAAATCTTGGCAAAGCAATTATAAAGCTTGACTTTAGTAGAATATGTAACTGTTAGTGAAGGATTAGTGTATCTTTCTTTAAGCTTATTGCAC