Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_15845 LG4 12308474 12311335 hypothetical protein
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   meristem maintenance, regulation of cell differentiation, phloem development, maintenance of root meristem identity, regulation of meristem growth, regulation of meristem growth, regulation of flower development, regulation of flower development, defense response to bacterium, protein phosphorylation, regulation of root meristem growth, regulation of flower development, regulation of meristem growth, defense response to bacterium, regulation of root meristem growth, regulation of flower development, defense response to oomycetes, maintenance of root meristem identity, regulation of cell differentiation, regulation of meristem growth, protein phosphorylation, regulation of meristem growth, regulation of root meristem growth, regulation of meristem growth, protein phosphorylation, defense response to oomycetes, regulation of flower development, defense response to oomycetes, defense response to bacterium
Cellular Component   is active in   plasma membrane
Cellular Component   located in   mitochondrion, endoplasmic reticulum membrane, plasma membrane, endoplasmic reticulum membrane, mitochondrion, plasma membrane, endoplasmic reticulum membrane, plasma membrane, plasma membrane, endoplasmic reticulum membrane, endoplasmic reticulum membrane, endoplasmic reticulum membrane, plasma membrane, plasma membrane, plasma membrane
Molecular Function   enables   signaling receptor binding, signaling receptor binding, protein binding, transmembrane receptor protein serine/threonine kinase activity, protein binding, transmembrane receptor protein serine/threonine kinase activity, receptor serine/threonine kinase binding, transmembrane receptor protein serine/threonine kinase activity, peptide receptor activity, transmembrane receptor protein serine/threonine kinase activity
SNP Position Effect Amino acid change
G/T 12309016 5_prime_UTR_premature_start_codon_gain_variant
G/A 12309194 5_prime_UTR_variant
G/T 12309199 5_prime_UTR_variant
T/A 12309203 5_prime_UTR_premature_start_codon_gain_variant
C/T 12309270 missense_variant p.Pro20Ser
C/T 12309339 missense_variant p.His43Tyr
A/G 12309410 synonymous_variant p.Val66Val
G/T 12309494 synonymous_variant p.Gly94Gly
T/C 12309497 synonymous_variant p.Pro95Pro
G/T 12309800 synonymous_variant p.Val196Val
T/A 12309914 synonymous_variant p.Leu234Leu
G/A 12310004 synonymous_variant p.Ala264Ala
T/C 12310126 downstream_gene_variant
T/A 12310209 downstream_gene_variant
C/T 12310278 downstream_gene_variant
T/A 12310331 downstream_gene_variant
C/T 12310366 downstream_gene_variant
T/C 12310548 downstream_gene_variant
A/G 12310620 downstream_gene_variant
A/T 12310622 downstream_gene_variant
G/A 12310939 missense_variant p.Ala364Thr
T/A 12310944 synonymous_variant p.Val365Val
T/A 12311132 3_prime_UTR_variant
C/T 12311137 3_prime_UTR_variant
T/G 12311297 3_prime_UTR_variant
T/G 12311305 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_15845.1
MFRKRHIAASLARELLALQPLFIIFLFSLHHNTVQCQGRLSKHVSSSSGYKDDPKKIILSLVLGAVTGLVCSVFFALVVRCVVQYLNRTPILKGPVIFSPKIAPKTLQLALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFGSSSPEAKKKSVKRQIQTELELLASLRHRNLMSLRAYVREPDGFSLVYDYVSTGSLADVLNRVWENELAFGWEVRLRIAVGVVKGLQYLHFTCAPQILLHYNLKPTNVMLDGDFEPRLADYGLAKLLPNLDRGTSLYTPPECFLNCSRYTDKSDIFSFGMILGVLLTGKDPTDPFFGEAASGGSLGGWLRHLQQAGDARDALDKSMLGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF*


CDS Sequence:
>Vu_15845.1
ATGTTTAGGAAAAGGCACATCGCTGCTTCTCTTGCCAGGGAATTGTTGGCACTCCAGCCACTTTTTATTATCTTCTTGTTCAGCTTGCACCACAACACTGTGCAATGTCAAGGAAGGTTGAGTAAACATGTTTCTTCATCATCAGGATACAAGGATGACCCCAAGAAGATAATTTTGAGCTTGGTTTTAGGAGCAGTAACTGGACTAGTTTGTTCTGTTTTCTTTGCACTTGTGGTACGCTGTGTGGTGCAGTACCTAAACCGCACACCAATCCTCAAGGGGCCTGTTATTTTCTCCCCCAAAATTGCCCCCAAGACACTCCAATTAGCTTTGGCGAAGGAAAACCACTTGCTTGGTTCGAGTCCTAATGGGAAATACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTGAAAAGGCTAACACCCTTTGGAAGCAGCTCCCCAGAGGCTAAGAAAAAATCAGTGAAGAGGCAGATACAAACTGAGCTAGAGCTTCTTGCAAGCTTAAGACACAGGAACTTGATGAGTTTGAGAGCCTATGTACGTGAGCCTGATGGTTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCTGATGTGTTGAATAGAGTTTGGGAGAATGAATTGGCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACCTGTGCGCCTCAGATACTGCTGCACTACAACTTGAAGCCAACAAATGTGATGCTGGATGGTGATTTTGAACCCAGATTAGCGGACTATGGTTTGGCCAAACTTCTACCCAACTTGGATAGAGGAACTTCTCTCTACACTCCTCCTGAATGTTTCCTCAACTGCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACTGGTAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCGAGTGGTGGAAGTTTGGGAGGTTGGTTGAGGCACTTGCAGCAAGCCGGTGATGCGAGGGATGCCCTTGATAAGAGCATGTTAGGGGAAGAAGGAGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGA


Promoter Sequence:
>Vu_15845::LG4:12306474-12308474(+)
AGTCATCTTGTGCAAAAATAGTGCTAAGATCTGTAATGTAAAATGGCCACATTGGTCTAAGTAAGTTGAAGAGTTATGCTGCACTGGTAGCACCCAGCCAGCACTTTGTAATATGATGTTTGTGTAATTTTGTTTACTTTTGAGATGAAGCTGCGATGCACACTAGGCTAGGGATTTGTGTATGTTGTGTACATTGGTTTTTGTGAAGGTGTTGTGGCTGTAATTCAAATTTTTGTATTTTTGGGATTACTTGGTGGGACATGTACCCATGATGTCATGTCCCCTAGCTCTAATATTCGGATGTGTGCTATATATATATATATATATATATTGTCAAAGGCAAAAAGATAAAGAAAACCATCGATCACCTGCTGTTTTAGAGTGACCCCCTACCCCCCAAAAAAACTCAAATCATTTGTAAATTTAATAAAGTTTCAGTCTTGAAAAGACGGAGTGGGACACCATGTTCGAATGCATGGGAAATTTTTGGTCAAATTAATCAAAAAGTGAAGTGGTCCATTTCACCCCAGTTTTCAGTATTGGAAAATTATGTCAAAAAACACTGTATTTTTCGTACCCAGCATTGAATAATCACTGTTCCTGAACTGGTACATCGTTTGAAAAATGAAGTTTAGATATTTCGTAAGCTTGTAATGAAAAAATTTCACTGAGAGACATGCTTGTTGGACAAAACAAAGCTGAATCTAGTAGGTTAGGGCAACACTCATGTTATGTTTTAACACAGCTCTAAACTAAAAGCTCAACTTTTGTCACGGGTGACCTTAACATAATTATTGATATTAGTGACAGTCTAACAAACACCTGAAGTGGACCCTCCTCAACTGGGCTATGTCTTATGACCAGACCACATTTTAGAGGAAAAATCGGTTGTAATCTTTCAAATATACAAAAGTGATCTGAACTCGGTCTTTGTTTTTAAAAGATAGTCTTTGAAAAATATGACCAATTCTGTTTCTAATTATATAAATTAATCTTCACTTGATTTTCTCATAAATTAAAGTAAGAATTTTCTTTCAGTTGAACTATTTAAATTGATTTTTAACTTGAGGAAAAAGTTTTATTCATTTTAACTCAATTTTATTTTCTCTACAAGTATTATTTTTAAATGTTATCTGAACTTAAAAACCAAACACTGTGGAGAATACTTTCAAAGGGAAAATGACTGATTTGTTTAGCGTGTGTTTTAAGCTGGACATTTTGGTACGCAAGTTTGATTAACTATTAATAAATTAATTTACAAAGGTGAAGTTCATTTTCAGATTATTCTATTCTCTAGCACCCCACTCCTTTTCCTGCTTGAATTTATGACTAATGGGTCAACCAAAAATTTCACTCTTCTAGTATTTTCATGAAATTTGTAGTTCCACCTAATTTCTGAATTTCACAATCAAAAACTGTTTATAAAATAAAATTTTACGTTATTAAGCTAAGAAATAAAAAATAGAAATTCTACATTAAAATACAAGAGTTATTTCTTAATTTTAATCCAAAGATAACCTTATTCCTATTCCTATCCCACAAGAGAACTTTGAAGTAAAAATGTGGTTAAAGTCATTCCTAATCCTAGCAGCTGCCACCAATAACAGAGAAAAGAAAGAAAAGATAAGATCATAAAGAAGGAAAAGCAAAAGCATGCAATATGTGTATATAATAAATATAAATATATATATTAATTGAAACTTAAGTAATTAAAGGCAATAATTTGATCGAAAAAAGAGATAACTTTACTAATGACACACACCAAACATAACACATAGCTAGAGTTGTTAACCACTCACTCATAGCATATCACAAATTCCCAGGCACCTTATTTCAACGGCCCAGATGCGTTCTGATGAGATCGGACGGTCCACGAGAACTGTACATTGCCCCTCTCACGGATTACAATGTTTCGCTTTCGGACCAAACGTGGGCCCCACATGGTACTGTGTCTTGAGTGCTGGCTCCTCACAAAGGCGGGAACCAGTTTTTTGTCGCAG


Gene Sequence:
>Vu_15845(+)
GAGGTATGGTTCTTTGTTGTCTTCAGAAAGAGAGAGAGAGTGTAGAGAGAGAAAGAAGAGACAATCACTGAAGCACTCTACATGCTGTGTGCGTGACTCTGTCACTGTTTGTGTTTAAACACCTAAATCCAGTGACATTGCAGTTTTTGAGGAGCATTTGGTTGTGTCTGTTCTAGTTGTTGTTGTGGTTCAAGTTTGGTTACTACCACATGTTCACGCCCCTTCAATTCCTGTTCAACCTTTTGACTTTCTGTTTGGTTTCCAAGGAAAAAGATAGCAACTTGTTTCTGGGGCTAGTTTGCTTTTGGTTGGGTTTGTTAGTCCCTGCTGGCACCTAGGAATAGTGGGGTTTTGGTTTGTTTTTGTTTTCAAAAGTTTCAAATTCTTGTTCTGATTCCTGTGAAGGTAGAAAATTTATGAGTGGTGAGAGGAGTGAAAGGATGGGATTCGGTGGTAAAATGTAAACTATTCGGTGACAACATGTGTCCTTGCTTTTCTGAGATGGCTTTCTTGTGAAGATTTTGGGTTGAAAAGGTTGAGGAGGATGCTTATGCTTATGCTTATTCTTATGTGCGTGCTTGAACTTTATTTAACCCATTTTAGCATCAAGTGTAAAAGGTTGTTCTTGGTCATGTTTCCAAGTGTTGAGGTGATGGTGGGTTTGGGCATGTGAGTGATTCATGCCTCATTTTGGAGCTTCCGGGATTGGTTTCTGGCTTTGTTTGGTTGTTGTTCTTTGATGTTTAGGAAAAGGCACATCGCTGCTTCTCTTGCCAGGGAATTGTTGGCACTCCAGCCACTTTTTATTATCTTCTTGTTCAGCTTGCACCACAACACTGTGCAATGTCAAGGAAGGTTGAGTAAACATGTTTCTTCATCATCAGGATACAAGGATGACCCCAAGAAGATAATTTTGAGCTTGGTTTTAGGAGCAGTAACTGGACTAGTTTGTTCTGTTTTCTTTGCACTTGTGGTACGCTGTGTGGTGCAGTACCTAAACCGCACACCAATCCTCAAGGGGCCTGTTATTTTCTCCCCCAAAATTGCCCCCAAGACACTCCAATTAGCTTTGGCGAAGGAAAACCACTTGCTTGGTTCGAGTCCTAATGGGAAATACTACAAAACTGTGCTTGACAATGGACTCACTATTGCAGTGAAAAGGCTAACACCCTTTGGAAGCAGCTCCCCAGAGGCTAAGAAAAAATCAGTGAAGAGGCAGATACAAACTGAGCTAGAGCTTCTTGCAAGCTTAAGACACAGGAACTTGATGAGTTTGAGAGCCTATGTACGTGAGCCTGATGGTTTCTCATTGGTTTATGATTATGTGTCCACTGGGAGTCTTGCTGATGTGTTGAATAGAGTTTGGGAGAATGAATTGGCCTTTGGTTGGGAAGTTAGGCTCAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAGTATCTTCACTTCACCTGTGCGCCTCAGATACTGCTGCACTACAACTTGAAGCCAACAAATGTGATGCTGGATGGTGATTTTGAACCCAGATTAGCGGACTATGGTTTGGCCAAACTTCTACCCAACTTGGATAGAGGAACTTCTCTCTACACTCCTCCTGAATGTTTCCTCAACTGCAGGTAAGACAAATCACTCGGTTTGAATCATGCTCATTCACTGGTGTTTCCAACTCAGTCTGTTTCTTTTCTTCGTTTCTGACGTCAAAAGGGTACCTAGGTAGTTGACATCAGCTATTTGTTTTATTGGTTTCCTTTTCAAAAGCTCCAAGCCTCATTGTAGTTATTCCCTTTTGAGCACCCTAATCAAAGACTCTTGTTCTTCAATTTTCATTGTGTTCATTTGCGGATGGAAAATGGTATTATTTAGTAAAAACTATGTAAAGTAGTGTTTTTGTAACCAGCTATTAGTATTACTTCCTAATATGAAGTTTTAGACCTCAGGCTCTTTGTCTGGTCCAAACGGAAGTTCACATGCTGTAAACTACTGAAACATAGATTGGTGAGTAGGAACCCAACTAAAAATTATAGTTATTATAATATCACTGGACAAAGGTTTGTGCCCACTTTAACTTTATGTATTTATAGCTTTTTTTCATTGGTATATATATGCCGCTGGATGCATCAATATCAATAGTACTAAGTAATATCACTAAAAGAGGTTGCTTGCTTGATGCATTGAGTGTTTATGAACTTCATTCCGTTCCTTCTTGTGAAACTTCATCGTATTCAGATTGAATGGTATGTTTTGCAATTTCAGCAGGTACACTGACAAAAGTGACATCTTCAGTTTTGGCATGATACTAGGTGTTTTGTTAACTGGTAAGGACCCTACAGATCCATTCTTTGGAGAAGCAGCGAGTGGTGGAAGTTTGGGAGGTTGGTTGAGGCACTTGCAGCAAGCCGGTGATGCGAGGGATGCCCTTGATAAGAGCATGTTAGGGGAAGAAGGAGAGGAAGATGAGATGCTAATGGCTGTTAGGATTGCTGCTGCATGCCTCTCTGATATGCCTGCAGATAGGCCTTCTAGTGATGAGCTTGTTCACATGCTAACGCAACTGCACAGTTTTTGAACCAAACCTTCATTCTTGGGTTTCTAGAGATTTTTTCTTCTTGTTCTCTTATCCCTATATCTGTAATAAGATGATAGGGGTGTGTGGCTGGCCATGATTCTGGTGTAATTGATTGTTTTGCTTGATCTTGGTTTCTCATGGTGTGGTTTCTAATCATCTACTTTCTCTTTCTATATATTCTTTTGGCTGATTTTGCGTAGTTGGTTTAGGTCACAATAGCACATTATGTTTGTAAATGACTTAGTCATGTTAACAAGAATTTTCTTCTATGTGAACATTCAAAATATCTCTTTTCTTC