Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16046 LG4 14091122 14094351 PREDICTED: serine/threonine-protein kinase PBS1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein autophosphorylation, defense response to bacterium, defense response to bacterium, defense response to bacterium, defense response to bacterium, protein autophosphorylation, defense response to bacterium, protein autophosphorylation, defense response, innate immune response, innate immune response, pattern recognition receptor signaling pathway, defense response to bacterium, defense response to bacterium, innate immune response, defense response to bacterium, defense response to bacterium
Cellular Component   located in   nucleus, plasma membrane, plasma membrane
Molecular Function   enables   protein binding, protein binding, protein binding, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity, protein binding, protein kinase activity, protein binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity
Pathway   B 09159 Environmental adaptation   C 04626 Plant-pathogen interaction [PATH:ko04626]
SNP Position Effect Amino acid change
C/G 14091700 upstream_gene_variant
T/A 14092048 upstream_gene_variant
T/A 14092716 upstream_gene_variant
T/C 14093111 upstream_gene_variant
G/A 14093291 upstream_gene_variant
T/C 14094035 missense_variant p.Val368Ala

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16046.1
MGCFSCFDSSSSSRENHNLRSHHHPQPNSNSNPNPNINLSLPSQISKLPSGADKLRSRSNGGSKRELPPSNTKEGHGPAVQIAAQTFTFRELAAATKNFRPESFVGEGGFGRVYKGRLETTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGEQRLLVYEFLPLGSLEDHLHDVPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEAYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTQPHGEQNLVTWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPLIGDVVTALSYLANQGYDPNNAGHGYRGSSDDKRNRDDKGGRILKNDEAGGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLRQKRQQSLQEGSYGST*


CDS Sequence:
>Vu_16046.1
ATGGGTTGCTTTTCCTGTTTCGATTCGAGTTCAAGTTCGAGGGAGAATCACAACCTCCGTTCTCACCACCACCCACAACCCAATTCCAATTCCAATCCCAATCCCAATATCAATCTGTCTCTCCCTTCTCAGATTTCCAAGTTGCCATCTGGAGCAGACAAGTTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAATTGCCTCCTTCCAACACCAAGGAAGGACACGGACCCGCCGTCCAAATCGCTGCTCAAACTTTTACTTTCCGTGAACTTGCTGCTGCAACCAAAAACTTTAGGCCAGAATCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGGTCAGATTGTTGCAGTCAAACAGTTAGACAAAAATGGTCTACAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGGGAACAACGCCTCCTTGTTTATGAATTTTTGCCTTTGGGATCATTGGAAGATCACCTTCATGATGTTCCCCCTGATAAGGAACCACTAGATTGGAACACCAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGATTAGAATACCTGCATGACAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCGTCTAACATATTACTTGACGAAGCATACCACCCTAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACCCGAGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAGCTGACAGTGAAGTCTGATGTATATAGCTTTGGGGTTGTCTTCTTAGAGCTTATTACTGGCCGCAAAGCAATCGACAGCACCCAGCCCCATGGAGAACAGAATCTTGTCACATGGGCACGTCCACTTTTTAACGACCGCAGGAAGTTTTCAAAGTTAGCTGATCCTAGGCTGCAGGGACGGTTTCCCATGCGTGGTCTTTACCAGGCTCTAGCTGTTGCGTCAATGTGCATTCAAGAATCAGCTGCCACACGCCCTCTGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGGATATGACCCCAACAATGCTGGCCATGGTTATAGAGGGTCTAGCGATGACAAAAGGAACAGAGATGATAAAGGTGGAAGAATACTTAAAAATGATGAAGCTGGGGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCTAGAATGTTAAATAGAGATCTAGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGACAAAAAAGACAACAAAGTTTGCAGGAGGGCAGTTATGGTTCTACCTAA


Promoter Sequence:
>Vu_16046::LG4:14089122-14091122(+)
CACGTCAACCTAATACATTTCTCTATTCCCCAGTTAAATCTCTCATTGTATTCTATTTTATTCCAATTACAACTTCTTAATATTCTTCTCCTGTCATCATTATCTAACCACTTTTCAGATATACCTTTTTTTTTTTTTTAATCTCTATGCCAATGCATAACTAATTGTCAGCTAGTTTCATTTATTAAATATTTAATAATAATCTCCACAATTTTAAGTCAATGCCAATTTTTTTTTTAATAATATCGACACATTTTAAAAAAATTATTACCAATGAGATTCTGCTACGCCTACAACCTTTTCTTCAAAAAAAATATTGTTAAACTTTTTTCTTCTCCCTTATTGTCACTCTAAATATATAGACAGAGATAAGAGTAAGTCAAAGTATAAATAAACTAATGTCAATGAGCAACATTTAATTTTAGTGCGAGTTAATAGGTATATATGATGATAAGTTTGGTAATTACTTAAATTATTTACTTTCCAATCTTTTTAATATTTATAACTAATATTTTTTTTGTGAATTATTATGTTATTATTATAACACTTATGGTTATAGTTAAATAGGTTACTAATATTTTTTTTAATATTTTTATAGAGAAATAAGAGTCCGATCCGACTTGAAAAAAAGGAAGTCATTAACTAAAAAGTCTTATATAATAATAATAATTGACTCCCAACAAGTAACATATAAAAAGATAATTCTAACTTTTAATTAATCCAGTAATAGTACTAAATGAAAACTTCCAAAAAAAAAAAAAAAAAAACAAAACGTATTATGTTATTTTTACTCAACAAGTATCTGACTAAGCCAACATTAAATTTCTGAACATAAATAAGAAAGAAAAATTTTGCTGAGGGAGTGAACTCTTGCAATGTATAGAGCTTTTTGGATACTTACATTTCAAAGCCTTTGTAATTTCTTTACTTTAAACTTTGTTTTAGTAAAATTTGATGTTAATCTACATTTAACATAAATAGATTAGAGGTGATATCTATATCTTATACGAATTTAATTCTTATATTATTCAGTAAACTTTACATTTTCTTACTCATTTCTTGGACTAATCAACCAATCTTCTATTTATTGGAATAAGATGTAATAAAATTTGCTTATAATAATATAATTGTGATAATACCCAATAATACAATCTTGATGTTTCTGCTAGTATATATTGAAATAGTCATAAAAAAACTTTGATATTGATATTTTTGCCATGTTATATAAAAAGAAAAAAGTTAAAATATTAAACAAAGTAACTCGTACAATAAACTGTCAAAGAAAAATCAAATATGAAAAGAGTACTAAAGAGAAACAAAATAATTTTAATATTTAATGCATGGTCTATTTATAAAAGAACAACAGATAATGTATTCACTATCAATAAAATTTGTCCATAATCAAACTAAAATCGTATATGCTTTACCTAAATATTATAACTTGGCACAAAAATACTCAACAAGGGTAATTATTATTTTTTTTAGATTTTGAAACTAAAATTATCGAACAAGTTTTTTTCTTTTCAAACTTATTCTCAAGATCAATTATTACCAAAACTGTTTTCAAAACTGAAACAAAATAGAACAGTGTAAAAACTTAGAACGAGAAAAAACAAAAGTAAGACTGAGATGATGTTGGAAAATATGAAAATGGAGTGTGTTTATAATATAATATATGAAGGATGAGTGGCATTGGTAAGATGAATGAAGAAATTAGTAATGGAGCGTGGAAGGTGATTGGGAAGATTGGGTGTCTTGGGTTTCATAATTAGTGGAGTTTGGTGGACTTCACCAAATTCTTTCACTACAATCTGTTTGTTTGTAAATAAAATAATATTAATAGAGAATAGAATAGAAACTCTAACCCTTACTGTTGCTATGTGTTTTGATTCCCTTGCAGTTGATTGCGTTGAGTTGCAGTTGCAGTTGCAGGTGTATTGTTAACTCTGAATTTCACTGAGTGATTGATCATTGATTGGAATTTGGGGATAAACATTAGA


Gene Sequence:
>Vu_16046(+)
ATGGGTTGCTTTTCCTGTTTCGATTCGAGTTCAAGTTCGAGGGAGAATCACAACCTCCGTTCTCACCACCACCCACAACCCAATTCCAATTCCAATCCCAATCCCAATATCAATCTGTCTCTCCCTTCTCAGATTTCCAAGTTGCCATCTGGTCAGTCTCTTACTTTTTTTTCATCTCATTTCAAGCTATCAAATCAATTAGCTATTTAATTAGTTGAATTCTAGGGGATCCACAACACAATTCATATGAATTCTTTCTGTTGCAATTGGAATTGCAGGAGCAGACAAGTTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAATTGCCTCCTTCCAACACCAAGGAAGGACACGGACCCGCCGTCCAAATCGCTGCTCAAACTTTTACTTTCCGTGAACTTGCTGCTGCAACCAAAAACTTTAGGCCAGAATCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTCTACAAAGGCAGGCTTGAAACCACTGGTCAGGTACAGTCACTACTTTTCACTCTCTCCACACATGGGGAAGAAACAGAGTAAATCATCACTAATCACTGTGCTTTCTTGGAATCAATGGTTCTGGTCCACTGTCAGAATATCAAAATTATTTCTTATCTTAGACATGATCTTTGATTTGGTTCCACTTCCACCAAGACCAATGAATTTGATTTTCCTTGGTCCATCGTTTTACAAAAATGCTTTTATCACTCTCGATAATGCTATACAGAGATCCATGGTGATTGATATATATCATCATATACTACCATCTATTCCAAGGGGATAAGGCCTGGTTATAAAATAGGGAAATAAAGATAGTTTTTATGATTATTTGGATGAACTTAATTCCGTAGATGTTCTGAAGATGTTGAATCATCTGTGTTTAAGTCTGAAATATCTATTATTGTGCTCTGCCAAATATTTATGTTATGTTCACAAGTTTGTATTTGGCCGTTGTCTTCTGAATGATCAAGTATACATTTAAATTCATGGTTCTTCTTGATCAGATAACTTAACATTTACCACCCCCTGTGCAGGGGCCCACATTTCATTAGGTTCTTTTTGCACCAATTGAAATGCTTTACCTTTCACACCACTAAAGTTCTGTCTAAAATTATAACTCCCCTTTTCAAAGAGACCATTCTTAATTGTAAATGCAGAGTAATCAAAGAGTTTTTATGTGGTTGAGACCTCTAGTTATTAGTGAGTCCTAACATCTGATCATTTGGCTGTGCAGATTGTTGCAGTCAAACAGTTAGACAAAAATGGTCTACAGGGTAATCGGGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTGCATCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGGGAACAACGCCTCCTTGTTTATGAATTTTTGCCTTTGGGATCATTGGAAGATCACCTTCATGGTATGGTTGTTTAACTCTCTTCTTAGTTCTTTGATTGAAGGTTTTTAGGTTAATGTTTCTCAGATATTTAAAATTCCCTGAAAACCAAAATCAATAGCTGATATATTATTTGAGACTCTAAACAGTATGCAATACTTATACGAGAAAGAAAAATATTAGAAGTTATTACAATTTTATCATTTCCGATATTGTCAAATATCACAGAAACTTATATCCTTTAATGAAATGATCAAAACATGTAAACTACTTTATGTGTTTTGGGATGCATAAAACTGTAAATACTGCTGTGCAGAAAATACTGAAATGACATTAAATTCTGATACTGGTCACTGTATTCTTTGACACACTTTACTTTCTCTTGTATAATGACATTTCTAGGTAGTGAGTGAGCCGTTCTGCCACGCCAATATTGCCTATCTTCTTCTATTTCCTTACAATGCATGTTGTTTGTTTGTTTTCTTACGTATCTACTTAAATTGATAGAGCCCTTACTCTTGCAATGGTTTTTTGTTGTCTTTGTATCATGATTAAGATTTATATGCGGCTTTTACACCCTGGTATGAGAACATCCATGCTCTTTATGTTATGCCCATCTAATTTTTATATTCCAAGCATTGCCACTCTAATACATAATTACTCTTTAATGGGTGAGTACGTCCACAAAGTAGCATAACACAACATAGGTAATTTATACACTCCTAACCATGTAATTTTTTGATAGAAAATTACTTATGGTTTGCATGCTATATGTAGACTGCCTTCTTAAACAATATGTAGTTGTCATAATTACAGTTGATGTTTAAATTTGTTTATTGATCTCTGTGCAGATGTTCCCCCTGATAAGGAACCACTAGATTGGAACACCAGAATGAAAATAGCTGCTGGTGCTGCAAAAGGATTAGAATACCTGCATGACAAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAGTCGTCTAACATATTACTTGACGAAGCATACCACCCTAAGCTTTCTGACTTTGGTCTTGCGAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACCCGAGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGACAGCTGACAGTGAAGTCTGATGTATATAGCTTTGGGGTTGTCTTCTTAGAGCTTATTACTGGCCGCAAAGCAATCGACAGCACCCAGCCCCATGGAGAACAGAATCTTGTCACATGGGTTTTGCTCTATTCTCTCTCTCGTCATTATAGTTAGTTCAGACTGCATAAACTCTTGTAAATTAAAACGGTGTGGTGATTGTGGTTTTAGTTGTATGTTTGTGCAGGCACGTCCACTTTTTAACGACCGCAGGAAGTTTTCAAAGTTAGCTGATCCTAGGCTGCAGGGACGGTTTCCCATGCGTGGTCTTTACCAGGCTCTAGCTGTTGCGTCAATGTGCATTCAAGAATCAGCTGCCACACGCCCTCTGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGCCAACCAGGGATATGACCCCAACAATGCTGGCCATGGTTATAGAGGGTCTAGCGATGACAAAAGGAACAGAGATGATAAAGGTGGAAGAATACTTAAAAATGATGAAGCTGGGGGATCTGGACGCAGATGGGACTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCTAGAATGTTAAATAGAGATCTAGATAGAGAACGTGCTGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGACAAAAAAGACAACAAAGTTTGCAGGAGGGCAGTTATGGTTCTACCTAA