Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_16843 LG4 29263456 29266212 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   defense response to fungus, plant epidermis development, response to inorganic substance, root morphogenesis, cell development, defense response to fungus, defense response to other organism, defense response to other organism, toxin metabolic process, defense response to other organism, defense response to fungus, signal transduction, cellular catabolic process, cellular catabolic process, response to bacterium, root morphogenesis, cell wall biogenesis, response to oxidative stress, cell development, toxin metabolic process, response to organic cyclic compound, response to bacterium, cell development, toxin metabolic process, response to wounding, immune system process, cellular catabolic process, cell differentiation
Cellular Component   located in   extracellular region
Molecular Function   enables   molecular_function
SNP Position Effect Amino acid change
G/A 29263486 missense_variant p.Gly11Arg
A/G 29263494 synonymous_variant p.Ala13Ala
T/C 29263536 synonymous_variant p.Phe27Phe
G/T 29263739 missense_variant p.Arg95Ile
A/T 29264014 stop_gained p.Arg187*
C/T 29264366 downstream_gene_variant
A/G 29264470 missense_variant p.Lys219Arg
A/G 29264552 synonymous_variant p.Gln246Gln
G/T 29264923 downstream_gene_variant
A/G 29264986 downstream_gene_variant
T/A 29265004 downstream_gene_variant
C/T 29265153 downstream_gene_variant
A/T 29265308 stop_gained p.Lys394*
T/C 29265399 downstream_gene_variant
A/G 29265516 splice_region_variant&intron_variant
C/T 29265637 synonymous_variant p.Ala430Ala
G/A 29265768 splice_region_variant&intron_variant
C/A 29265950 downstream_gene_variant
G/A 29266113 missense_variant p.Gly508Glu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_16843.1
MKIPPKGFVLGVALWVLLFSKPCLTVFVSIDCGSSQSSTDENNIRWIGDDDYIQHGESHQVYLGSNPLSTLRVFPGRKKSCYSIRVGKGEKILTRASFYYGNYDDKFSPPVFDLQFDGNYWATVNSSNYYYVDYEAIYVAKGNFTSICVAQTKPNQFPFISSLEVRSLDPTMYSHVDPNHALILQWRYAFGGNQTIRYPDDAFDRIWAPSYGIGLSEVKSEASGIDSSTTEDHPPQAALENAVISSSTTQYMQFINRLSTEELPIYITAYFSEVNESAVGKRSIQMYIDNKPFLSPIVPPFGSVKEVFITNMTASAKTSFTLQASNTSTLPPLLNALEVYTLSDTLTAGTDNRDVEGLLQLQLAFEVLVEWSGDPCLPYPYNWDWIQCNTDVKPRVIALYLTGYNLRGTLPDFSSMNALEIIYLQNNTIEGPIPDFLGLLPNLKTLNLSNNRFNGSIPTSLKNKSIELVTTNNCLSGMKCQPLSDTPSKVLPSPPPPGLQFVSGDEALGSGAEKIINNLNMALIVAMQTLLLLINSAAVHF*


CDS Sequence:
>Vu_16843.1
ATGAAAATCCCTCCAAAAGGTTTTGTTTTAGGAGTTGCACTTTGGGTGCTATTGTTCTCAAAACCTTGTCTCACAGTGTTTGTAAGCATTGATTGTGGATCCTCACAATCTTCCACTGATGAAAACAACATAAGATGGATTGGAGATGATGACTACATTCAGCATGGAGAGTCTCATCAGGTTTATCTTGGTTCTAACCCATTGAGCACTCTGAGGGTGTTCCCAGGTAGAAAAAAGAGTTGCTATTCCATCAGAGTTGGAAAAGGAGAAAAAATTCTTACTAGAGCAAGCTTTTACTATGGCAATTATGACGACAAATTCTCTCCACCAGTGTTTGATCTTCAGTTTGATGGAAACTACTGGGCCACTGTCAACAGCTCAAATTACTATTATGTTGATTATGAAGCAATATATGTAGCAAAGGGAAACTTCACCAGCATATGTGTTGCTCAAACAAAGCCTAACCAGTTTCCCTTCATATCATCCCTTGAAGTACGTAGCTTGGACCCCACAATGTACAGTCACGTTGATCCAAATCATGCATTGATTTTGCAATGGAGATATGCCTTTGGTGGAAATCAAACTATTAGGTACCCAGATGATGCTTTTGATCGAATATGGGCGCCATCATATGGTATAGGCCTTTCTGAAGTGAAAAGTGAGGCTTCAGGCATTGACAGTAGCACAACAGAAGATCATCCACCACAAGCTGCACTTGAAAATGCTGTTATTTCCTCAAGCACTACACAATACATGCAGTTCATCAATAGGCTGTCCACAGAGGAGCTTCCTATTTACATCACTGCTTACTTCTCAGAAGTGAATGAAAGTGCAGTTGGCAAAAGATCCATTCAGATGTACATAGACAACAAGCCCTTTTTAAGTCCAATAGTTCCTCCTTTTGGAAGTGTGAAAGAAGTGTTCATCACCAACATGACAGCTTCAGCCAAGACTTCATTTACTCTGCAAGCTTCAAACACCTCCACCCTTCCTCCTTTACTCAATGCTCTTGAAGTTTATACCTTAAGTGATACATTAACTGCAGGAACTGATAACAGAGATGTGGAAGGTTTGTTACAACTGCAGTTGGCATTTGAAGTGCTTGTGGAGTGGAGTGGTGACCCTTGTCTTCCATATCCATATAACTGGGATTGGATACAATGCAACACTGATGTCAAACCAAGAGTGATTGCATTGTATCTTACTGGTTATAATCTGCGAGGCACACTTCCGGATTTCAGTTCCATGAATGCACTTGAAATCATTTATCTGCAAAACAATACCATAGAAGGCCCCATTCCTGATTTCCTTGGACTTCTGCCTAATCTCAAAACATTGAATTTGTCTAACAACAGGTTCAATGGTTCCATACCCACATCTCTAAAGAATAAAAGTATTGAACTAGTTACAACAAATAACTGCCTATCGGGAATGAAGTGTCAACCTCTAAGTGATACTCCAAGTAAGGTTCTTCCATCACCACCACCACCAGGACTTCAGTTTGTTTCAGGCGATGAAGCTTTGGGGAGTGGAGCTGAGAAAATTATTAACAATCTAAACATGGCATTGATAGTAGCTATGCAAACTCTGCTGTTACTAATTAATAGTGCTGCTGTGCACTTTTAG


Promoter Sequence:
>Vu_16843::LG4:29261456-29263456(+)
AAATAAAATCAGTTGATAGCAGTTTGCTGATAAAACGTTGGATCGGTGCTCTAGTTTTGATTGATCCACAGGAAAACTTGATGTGCCTCACTCAATTTTTATTCTTTTTTTTATATATAGAAACTTTTATATAAATTTTAAATTACTGTGAAATTGAGATGTTATACGATTTTAATATTTTAAATGATAAATGAATATATAATTTTAATATATCATAAAATTAGTAAATTAGCATAATAATACTAATAAAAATTAATATTTATACTTAAGGAACATTTTCGATCAGCTTTCCAATTTTTTGAAATGTCTTTTAACTAATTAGGGTTTTATCAAATTTGTCTTAATTTGGTATGATATGTGTCTGTCTCCAGACTGAATTGATTATTTACATATCACAAATTATGTATTATTATAATTAATAAATATTAAACCAATTGTTGTAGATGCAGAGTTAATGCACGCCACGTATTGTTAGGATTAGCAACAGTTTCTTTAACATAAGACAACAATTACAAAAAGGTTGCATGGTCAATGACAAGGATTAAAACAGAAACAATGAATAAAAATAAATTGATTAATTTTTAATGCTCACATTACCATCTATTTTTTATGTATTAAAGTATCATTTAAGAATTTAACACCAATAAAACATGGTAGGTGTATCCTAATCATACGACTAAAGATAACACGTGTAAAACTCCTAGTCGTGCTAAAATATTATAAGATTTTAAAAATTAGCAATAACATTTTAAAAAAATCGACAAGAGAGGAAAAAGGTATTAAGACATTTTCTAATTTCATTCAGCCTTAAACATTAAACATGCATGACAGTATGTTTTATCTTAGAAATATCTCTTGAATTTTTTATTTTCCCTATTTTTTTTTTTCTGTATTTCTGACTTAGTTCACCCATGACTTTTGTAGTCTAAGTTTTGTTATTTTAACAGGGAAATCACACGCTACATCTTATGACAAATATTTTCTGCTGAGACTAATTTCTTTTTGTTCAAACAAGCCATAGTTATTATGTTGTTAACTGGGTCATGGCATCTCAGTTCTTGTGTTTTCAATTGTATGATAAGATTAGATAACATACAAAAAATAATTATCAGTGTTTGATTATTGCAAGTAACTGTTTGATCAAATGTCAAGCCATAAATTCCGCTTGAAGTCAACTCTATGGTGCTAAACATAAAAAATGAGTGTTTAGTTTATTCATTTATGTTTAAGGTTTGATAACAAAGCACTTCTGACACCTGGATATGTTTGAGACTATGTGAAAGACACGAACTATGATATTAAAGTGTTATTTATTCTCTCATAATCTAATAGTACTTTTGTTTCTTCCTCATTATGATGTTGACAATGCCAAAGAGGATTTGAACCAACTAATTAAGTATTTTTACCATAATTTTTCGAACAAAAATAATACTTTAATACATAATTTTTTATATTTATTTGATACTATCTTTATTTTTAATTTTTTATTCTCTTTTTTTGAAAAAAAAAATTTACTCAACCATTTTATTTTTATATTATATATTAAATGAATGTAAAAATATATCACAATACCAAAAACCTTTGATGCTAATAATTCAACCAAGAAACATTATAAGATTTCTTTAAACATATTTTTTTTTATCAAGTATTAGTCTCTTATTTTTTTTCTTGCATTGATCATCTTAACCCATCAAATATTGGTCACCACTTTGCTTGCACCATTGTGTTTTTTAGTGACTATCACTTTGAAACTTTCAATATATGATATCTAAATCCTAAGTCAAATAAGAAGACACAACAAACATCAAGAAAAACACAACCAACAGTTGAATATCCAATCATTATCTTCTTAAACTTTGCTGGCTGGTCACTACATGCATGCATATCACTAATGAAGCTATGATGGCATCATTATATATAATCACAACATGCTTTGGCTAAACACAACTCCACACCAGTTACAAGCTTATCCTTGTCATAGATCTCTTCTCAACCAACCA


Gene Sequence:
>Vu_16843(+)
ATGAAAATCCCTCCAAAAGGTTTTGTTTTAGGAGTTGCACTTTGGGTGCTATTGTTCTCAAAACCTTGTCTCACAGTGTTTGTAAGCATTGATTGTGGATCCTCACAATCTTCCACTGATGAAAACAACATAAGATGGATTGGAGATGATGACTACATTCAGCATGGAGAGTCTCATCAGGTTTATCTTGGTTCTAACCCATTGAGCACTCTGAGGGTGTTCCCAGGTAGAAAAAAGAGTTGCTATTCCATCAGAGTTGGAAAAGGAGAAAAAATTCTTACTAGAGCAAGCTTTTACTATGGCAATTATGACGACAAATTCTCTCCACCAGTGTTTGATCTTCAGTTTGATGGAAACTACTGGGCCACTGTCAACAGCTCAAATTACTATTATGTTGATTATGAAGCAATATATGTAGCAAAGGGAAACTTCACCAGCATATGTGTTGCTCAAACAAAGCCTAACCAGTTTCCCTTCATATCATCCCTTGAAGTACGTAGCTTGGACCCCACAATGTACAGTCACGTTGATCCAAATCATGCATTGATTTTGCAATGGAGATATGCCTTTGGTGGAAATCAAACTATTAGGTATGAGGAATTACAATACTGATATACACACCCCTACTCAATAGTAGATTTATGAACTATGGTAAGTAGAAGTATATGTTATGGTATTTAAACTCAAATTTTGAATTTCCTCAGTCTATATAGTTTACAGAACGATTCCCTTATTCTAACTATAGTAAGTTTTGAAGCAAAATAAACAGACTTATAAATCCATTGTCTTATAAATCTATTATTTTAAAGTTTTGAGTTGGAATTGATATCAATATCTTATGTAAGTTAGTCTCGTGTCTCATTCCTTAAATAACTTTATGAACGCTAATGTCTGCTATTAGATCTGGTGTCTGACATTGTTATCGTTGCATCAACTGGAATATGCTAGGTACCCAGATGATGCTTTTGATCGAATATGGGCGCCATCATATGGTATAGGCCTTTCTGAAGTGAAAAGTGAGGCTTCAGGCATTGACAGTAGCACAACAGAAGATCATCCACCACAAGCTGCACTTGAAAATGCTGTTATTTCCTCAAGCACTACACAATACATGCAGTTCATCAATAGGCTGTCCACAGAGGAGCTTCCTATTTACATCACTGCTTACTTCTCAGAAGTGAATGAAAGTGCAGTTGGCAAAAGATCCATTCAGATGTACATAGACAACAAGCCCTTTTTAAGTCCAATAGTTCCTCCTTTTGGAAGTGTGAAAGAAGTGTTCATCACCAACATGACAGCTTCAGCCAAGACTTCATTTACTCTGCAAGCTTCAAACACCTCCACCCTTCCTCCTTTACTCAATGCTCTTGAAGTTTATACCTTAAGTGATACATTAACTGCAGGAACTGATAACAGAGATGGTAAGTGTGTTCTGTTGTTACCAAAATATGTATATATCTCTATAGGGAGCACATAATTTGATAACTCTATCATGAGAAATGAGAATTATTGATACAAACCAAGTGGTTAAGATTAAACAAATGCTCATGACTTTTTAAAATGACTGTGACCACTATCTTCTATATACATGGTTGCTTGATACAAATTTCTTGTCTCATTCTTAGTCTCCACACAGTAAAAAAGATGTCACTTGATATGCCAAATATAGATAGACATAGATGTTCTACAAGTTACCACGAGTTATTTAACTTGGTGTTTTTTGTCTGTGTTTAGTGGAAGGTTTGTTACAACTGCAGTTGGCATTTGAAGTGCTTGTGGAGTGGAGTGGTGACCCTTGTCTTCCATATCCATATAACTGGGATTGGATACAATGCAACACTGATGTCAAACCAAGAGTGATTGCATTGTAGGTTGATATCCCTTCTTTCAACAATGTTTAGAAATCTTTTTACCAGAACAATATTTAGAAATTTTAAACAACATAACTGCTAACTTTCTTCTTTCTGTATATATGATGGAAAAACATAGGTATCTTACTGGTTATAATCTGCGAGGCACACTTCCGGATTTCAGTTCCATGAATGCACTTGAAATCATGTAAGACACATAAAATTCAGAAAAGAATTTGTTCAATGTGTTACGATCAAACCTTGGCTTTCTATTGATCAATTAAACTTCTCTATGAATTGCAGTTATCTGCAAAACAATACCATAGAAGGCCCCATTCCTGATTTCCTTGGACTTCTGCCTAATCTCAAAACATTGTAAGTTTCATTGTTGTACACATTATGTTCCAACAAATGCATCGGTTTGAACTCTATACACTGAAAACTAAATTTTTCCAATTCTTTGTGCAGGAATTTGTCTAACAACAGGTTCAATGGTTCCATACCCACATCTCTAAAGAATAAAAGTATTGAACTAGTGTAAGTTGATTCTTTTATGCTTTTTTGATAGTGAGAAGAAACATTAGAATTAACTTCTCTATGGTTTTTCAAACACATTTTTTCAAACAACTTTTCTGCCTTTTCATCTATGGTAGTGTACATTTTCTGACTTCCATTTCCTAATTTCAGTACAACAAATAACTGCCTATCGGGAATGAAGTGTCAACCTCTAAGTGATACTCCAAGTAAGGTTCTTCCATCACCACCACCACCAGGACTTCAGTTTGTTTCAGGCGATGAAGCTTTGGGGAGTGGAGCTGAGAAAATTATTAACAATCTAAACATGGCATTGATAGTAGCTATGCAAACTCTGCTGTTACTAATTAATAGTGCTGCTGTGCACTTTTAG