Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_17332 LG4 34393530 34397252 PREDICTED: mitogen-activated protein kinase kinase 3 isoform X2
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   abscisic acid-activated signaling pathway, induced systemic resistance, ethylene mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, abscisic acid-activated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, induced systemic resistance, ethylene mediated signaling pathway, induced systemic resistance, ethylene mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, response to abscisic acid, response to herbivore, abscisic acid-activated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, defense response to other organism, defense response to other organism, induced systemic resistance, ethylene mediated signaling pathway, response to wounding, protein phosphorylation, induced systemic resistance, ethylene mediated signaling pathway, response to herbivore, induced systemic resistance, ethylene mediated signaling pathway, protein phosphorylation, induced systemic resistance, jasmonic acid mediated signaling pathway, defense response to other organism, protein phosphorylation, abscisic acid-activated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, induced systemic resistance, jasmonic acid mediated signaling pathway, induced systemic resistance, ethylene mediated signaling pathway, response to abscisic acid, MAPK cascade
Cellular Component   located in   cytoplasm, extracellular region, extracellular region, nucleus, extracellular region, cytoplasm, chloroplast
Molecular Function   enables   protein binding, protein binding, protein kinase activity, protein binding, protein binding, protein binding, MAP kinase kinase activity, MAP kinase activity, MAP kinase kinase activity, protein binding, protein binding, protein binding, MAP kinase kinase activity, protein kinase activity, protein binding, MAP kinase kinase activity, MAP kinase kinase activity, protein kinase activity, MAP kinase activity, protein kinase activity, MAP kinase kinase activity, MAP kinase activity, protein kinase activity, protein binding, MAP kinase kinase activity, protein binding, protein binding, MAP kinase kinase activity, protein kinase activity, MAP kinase kinase activity
Pathway   B 09132 Signal transduction   C 04016 MAPK signaling pathway - plant [PATH:ko04016]
SNP Position Effect Amino acid change
G/A 34393535 5_prime_UTR_variant
A/C 34393551 5_prime_UTR_premature_start_codon_gain_variant
T/A 34393581 5_prime_UTR_variant
A/G 34393583 5_prime_UTR_variant
A/G 34393593 5_prime_UTR_variant
C/T 34393677 5_prime_UTR_variant
G/A 34393757 5_prime_UTR_variant
G/A 34394143 synonymous_variant p.Thr76Thr
T/C 34394152 synonymous_variant p.Cys79Cys
T/C 34394242 synonymous_variant p.Ile109Ile
G/A 34394359 downstream_gene_variant
A/C 34394360 downstream_gene_variant
T/A 34394631 synonymous_variant p.Pro137Pro
G/A 34394640 synonymous_variant p.Glu140Glu
T/A 34395340 splice_region_variant&intron_variant
C/A 34395471 downstream_gene_variant
A/C 34395552 downstream_gene_variant
T/A 34395845 downstream_gene_variant
C/T 34395935 downstream_gene_variant
C/G 34396034 downstream_gene_variant
A/G 34396046 downstream_gene_variant
G/C 34396263 downstream_gene_variant
A/T 34396642 downstream_gene_variant
G/A 34396782 missense_variant p.Gly425Ser
G/C 34396783 missense_variant p.Gly425Ala
G/C 34397137 3_prime_UTR_variant
A/T 34397140 3_prime_UTR_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_17332.2
MSGLEELRKKLAPLFDAEKGFSSSSTLDPCDSYTFSDGGTVNLLSRSYGVYNINELGLQKCTSSRSLDETDHSEKTYKCASQEMRIFGAIGSGASSVVQRAMHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMHRRIPEPILSFMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILDDPSPSPSKNKFSPEFCSFVDACLQKDPDTRPTAEQLLLHPFIKKYENDKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDLWQHTRNLYSESSIFSFSGKQHCGPSNIFTSLSSIRATLVGEWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPNFKDLGIDIATKRMGTFHEQFLVEPTGLIGCYSIVKQELYINQ*

>Vu_17332.1
MNLLSRSYGVYNINELGLQKCTSSRSLDETDHSEKTYKCASQEMRIFGAIGSGASSVVQRAMHIPTHRILALKKINIFEKEKRQQLLTEIRTLCEAPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRMHRRIPEPILSFMFQKLLHGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSVAMCATFVGTVTYMSPERIRNESYSYPADIWSLGLALLECGTGEFPYTANEGPVNLMLQILDDPSPSPSKNKFSPEFCSFVDACLQKDPDTRPTAEQLLLHPFIKKYENDKVDLAGFVRSVFDPTQRMKDLADMLTIHYYLLFDGPDDLWQHTRNLYSESSIFSFSGKQHCGPSNIFTSLSSIRATLVGEWPPEKLVHVVEKLQCRAHGEDGVAIRVSGSFIIGNQFLICGDGIQVEGLPNFKDLGIDIATKRMGTFHEQFLVEPTGLIGCYSIVKQELYINQ*


CDS Sequence:
>Vu_17332.2
ATGTCTGGATTGGAGGAATTGAGGAAAAAGCTTGCACCTTTATTCGACGCCGAGAAGGGTTTCTCGTCAAGTTCAACCTTGGATCCCTGTGATTCTTACACATTTTCGGATGGTGGAACAGTGAACTTGTTGAGTAGATCATATGGGGTTTACAATATCAACGAACTTGGGTTGCAGAAGTGCACATCATCAAGGTCTTTGGATGAAACTGATCACAGTGAGAAAACGTATAAGTGTGCTTCCCAAGAAATGAGGATATTTGGAGCAATTGGTAGTGGTGCCAGTAGTGTTGTGCAGAGAGCCATGCATATACCGACACATAGGATTCTGGCATTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTGTGTGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCACGGAGCATTTTACACCCCAGATTCCGGGCAGATAAGCATAGCTTTGGAGTATATGGATGGAGGATCACTTGCAGATATCTTGAGAATGCATAGAAGGATACCAGAACCTATTCTATCCTTCATGTTTCAGAAGCTACTACATGGTCTAAGCTATCTGCATGGAGTAAGACATCTTGTTCACAGAGACATAAAGCCTGCCAATCTATTAGTAAATTTGAAAGGAGAGCCAAAAATTACTGACTTTGGTATTAGTGCCGGCTTAGAGAATTCAGTGGCAATGTGTGCTACTTTTGTTGGAACTGTTACATACATGTCACCTGAGAGGATTCGAAATGAAAGCTATTCTTATCCGGCTGATATTTGGAGCCTTGGGCTTGCTCTTTTAGAGTGTGGGACTGGAGAATTCCCATATACAGCTAATGAAGGCCCTGTCAATCTTATGTTGCAGATTCTGGATGATCCATCACCATCACCATCAAAAAACAAGTTTTCACCAGAATTCTGCTCCTTTGTTGATGCTTGCCTGCAAAAGGATCCAGACACTAGGCCAACAGCAGAGCAGCTGCTTTTGCACCCTTTTATCAAAAAGTATGAGAATGACAAGGTAGATTTAGCCGGATTTGTTCGAAGCGTATTCGATCCTACACAAAGAATGAAGGACTTGGCAGACATGTTGACAATACATTACTACTTGCTATTTGATGGACCTGATGATCTGTGGCAACATACAAGAAACTTATATAGTGAAAGCTCGATTTTCAGTTTCTCTGGAAAACAACATTGTGGTCCAAGTAACATCTTTACATCTCTATCAAGTATTAGAGCCACACTGGTTGGTGAGTGGCCTCCTGAAAAGTTGGTGCATGTTGTTGAGAAGCTTCAATGCCGTGCTCATGGTGAAGATGGAGTGGCAATCAGAGTTTCAGGATCTTTTATAATTGGAAACCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGGTTGCCAAACTTCAAGGATCTTGGAATTGATATTGCTACCAAAAGAATGGGCACATTTCATGAACAATTCTTAGTGGAACCAACAGGTCTTATAGGATGCTATTCCATTGTGAAACAAGAGCTATACATTAATCAGTAA

>Vu_17332.1
ATGAACTTGTTGAGTAGATCATATGGGGTTTACAATATCAACGAACTTGGGTTGCAGAAGTGCACATCATCAAGGTCTTTGGATGAAACTGATCACAGTGAGAAAACGTATAAGTGTGCTTCCCAAGAAATGAGGATATTTGGAGCAATTGGTAGTGGTGCCAGTAGTGTTGTGCAGAGAGCCATGCATATACCGACACATAGGATTCTGGCATTGAAGAAGATCAATATCTTTGAGAAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTGTGTGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCACGGAGCATTTTACACCCCAGATTCCGGGCAGATAAGCATAGCTTTGGAGTATATGGATGGAGGATCACTTGCAGATATCTTGAGAATGCATAGAAGGATACCAGAACCTATTCTATCCTTCATGTTTCAGAAGCTACTACATGGTCTAAGCTATCTGCATGGAGTAAGACATCTTGTTCACAGAGACATAAAGCCTGCCAATCTATTAGTAAATTTGAAAGGAGAGCCAAAAATTACTGACTTTGGTATTAGTGCCGGCTTAGAGAATTCAGTGGCAATGTGTGCTACTTTTGTTGGAACTGTTACATACATGTCACCTGAGAGGATTCGAAATGAAAGCTATTCTTATCCGGCTGATATTTGGAGCCTTGGGCTTGCTCTTTTAGAGTGTGGGACTGGAGAATTCCCATATACAGCTAATGAAGGCCCTGTCAATCTTATGTTGCAGATTCTGGATGATCCATCACCATCACCATCAAAAAACAAGTTTTCACCAGAATTCTGCTCCTTTGTTGATGCTTGCCTGCAAAAGGATCCAGACACTAGGCCAACAGCAGAGCAGCTGCTTTTGCACCCTTTTATCAAAAAGTATGAGAATGACAAGGTAGATTTAGCCGGATTTGTTCGAAGCGTATTCGATCCTACACAAAGAATGAAGGACTTGGCAGACATGTTGACAATACATTACTACTTGCTATTTGATGGACCTGATGATCTGTGGCAACATACAAGAAACTTATATAGTGAAAGCTCGATTTTCAGTTTCTCTGGAAAACAACATTGTGGTCCAAGTAACATCTTTACATCTCTATCAAGTATTAGAGCCACACTGGTTGGTGAGTGGCCTCCTGAAAAGTTGGTGCATGTTGTTGAGAAGCTTCAATGCCGTGCTCATGGTGAAGATGGAGTGGCAATCAGAGTTTCAGGATCTTTTATAATTGGAAACCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGGTTGCCAAACTTCAAGGATCTTGGAATTGATATTGCTACCAAAAGAATGGGCACATTTCATGAACAATTCTTAGTGGAACCAACAGGTCTTATAGGATGCTATTCCATTGTGAAACAAGAGCTATACATTAATCAGTAA


Promoter Sequence:
>Vu_17332::LG4:34391530-34393530(+)
TCTCCTTCTCCTCCTTCTCTTCCTCCTTCTTCCACCCTTTCAATTCCACCTTCCTTTTTTTCCCAATCTCTCTCTGCCTTCTCAATTCTAACCCTAACCTCACCTCTTTCGAAATCTCCAAACTTCAAAAACCGCAAAATATAGTCTGAGAGAACCATCACCCCTGTTCAAACCCATCAATTATTTTCCACTGGGTCACGCTTTCACTCCCAAATTTCCGATTTTTCTATCTGTTTATTTTCTTGGAATCTATCAAATCTTTCACTCACTCATTCACTCTCATTTCTCGATCATCTCTCTTGTTCTGCAACACTAACAATGGCTCTCAGACCCATCGACAACGCTCTCCCAACAACAACACCAGAGAGACCCAAAAAGCAACCCAAGATCGCTGTTGCAACCCAAAAGCAGCAAGATCGTGCTGCTGTCGTCAATGGCGAAAACCAAGTTCCCTTGCCCTCATCAGGGGATACCACTGTTGACTATGTCTCCTCGGACAACCTTAAACCCTTGTCCGATCCCGAAGTTCAGATTCAGGTTTGCGTGTGTTCTTCTTTCCCCCGCTGTGCGATTAAAGATTTGGAATTCAATCTATTCGGATTATTTTATCTGAAACATAAAAATGTTTGGAAATGCAGAGTTTGATTGAAGATTTGAATTCGAAAAATTGGACCAAAGTTTGTGAGTCTCTGAACAATGCTAGGCGATTTGCGGTGTTCCACTCATCCCTTCTATTCCCTATTTTGTAAGGGATATTTTATGCTCTTTTCTTTGTTTAAATTTATATGTTTTTTTTTAAGTTTTGAGCTTTGACTGTTGGGGCAATTGATTTTCGAGGAATTAATGAGATGATGTCGTGGGCAGGGGAAATATTGTGTTGGTGGTGACGAAGACAATGAAGAACCCTCGTAGTGCCCTTTGCAAAACCGCAATTATGGCAGCTGCTGATATTTTCAACGCCTTTGGTGACAATTTTCCACAGGCGAATAAGGCGATAAACAGATAGAAAAATCGGAAATTTGGGAGTGAAAGCGTGACCCAGTGGAAAATAATTGATGGGTTTGAACAGGGGTGATGGTTCTCTCAGACTATATTTTGCGGTTTTTGAAGTTTGGAGATTTCGAAAGAGGTGAGGTTAGGGTTAGAATTGAGAAGGCAGAGAGAGATTGGGAAAAAAAGGAAGGTGGAATTGAAAGGGTGGAAGAAGGAGGAAGAGAAGGAGGAGAAGGAGAAGGTGGTGATGAGAAGGAACGCCATGGGCATATGGGAGGAAGAGAGTTGGGACAGAGGTTGAAGATTGCCATGTAGAGTGCCACGTCAACAAAAAATGTACAGCTCATCAGTTTTCTGCCAGCTGGGCAGCTGTGCCGTTAGTTTTTTAACGCCGTAACCAAAAAGGACTAACTTGCACCGTTTTTGCGAAAAGTGGGATCTTAGTGAACTTTTGAAAAAAAGTAGGACCAATTTGAACATACCCTACGAAAAGAGGGACCAAAATACGAATTAAACCTTTTTTTATAATAGCAACAAATAAAAAAATAACTTTTATCGTAATTATTAATATAAATTTTTCATTAAATTTTATGAAAGTATATTCATAAAAATAATTATAAAATAAATATTTTAATAATTTTATTATCAACAATTTTTTATTCATAAATAATTAAGTAAACTTAAAAAACAATTACAACATGTAAAATATAAAATAATAAAATAAAATATATTGGTAAAGACATAATTGATAACAAAATAATATATTAATACTAAAAACCGCAAATACATAATAATTATAATAGGAGATCTTTTTTTATTAATAGTCATAGATAATTTACAATTATTATGCATGATATTAACTTATTTAATAATTCTCTTAACTAAAAATATCAGGACTTATCTCAATTTTGATTAACTAAAAATATTTATTAATGTTATAAATACTAAATCTTTCACAAGATAAAGAAACAGAATACTATAAATACTGTAATAAAGCACATGCGAGG


Gene Sequence:
>Vu_17332(+)
GGAAAGAAATCTAATTAGTATATGCAAGATTTGATTTTTCGTGTGTTAGACTCAAATCCACGGATTCGAGTACCCTGACGTTCCTAACACACCGCTTTGTTACCTTGAATCTCACGAACACATTGTGTTCCTTCCCACCCCAACAACCCACGCAAAAACCTTAAATCGCACGCTGGAACTGAAACCCCTTTTAATTTTTTCGCCTTAGATTAAACCTCAAAAGGGTCGCATTCAATTTAATTTTTCATGTGAATCATCAAAACAATGTCTGGATTGGAGGAATTGAGGAAAAAGCTTGCACCTTTATTCGACGCCGAGAAGGGTTTCTCGTCAAGTTCAACCTTGGATCCCTGTGATTCTTACACAGTAACCCTCTCTCTCACTGCTGTTCAGTTTGTATTGAAATGGGTATCAATGGTTTTGTCTAATTTCGTTCTTTTTTTGGTTATTGTGTTTTTGGGTTTTGGTTGATTGGTTCAATTGAGAAGTTTTCGGATGGTGGAACAGTGAACTTGTTGAGTAGATCATATGGGGTTTACAATATCAACGAACTTGGGTTGCAGAAGTGCACATCATCAAGGTCTTTGGATGAAACTGATCACAGTGAGAAAACGTATAAGTGTGCTTCCCAAGAAATGAGGATATTTGGAGCAATTGGTAGTGGTGCCAGTAGTGTTGTGCAGAGAGCCATGCATATACCGACACATAGGATTCTGGCATTGAAGAAGATCAATATCTTTGAGAAGGTAGGTAGTATTATTCCTGCCATTGATTCTTGTGGTGTTTCACTGCAAAACTCATGTGGGTTACTTGTTTAGAATTTTACACTGATTGTGCTTGAAAATTGAACTCTCTTTACAATTGCTAAAAAAGCATGCATTGTTGTAAGCAATACATCTGTTATCCAGCTGTCTAAATGTGGTATTATATTGATGCAGGGTTGGATAGTACACTCTTGATCTTTGTTTTCAAAACAGTTGACACTTTGTTTTGGCAATAGTTGTTGTTATCAGCTGTTTGCTTAATGTCTGTAATTGTTTGTGCCAATTAGGAGAAAAGGCAGCAGCTCCTTACTGAGATAAGGACATTGTGTGAAGCACCTTGTTATGAGGGTCTTGTAGAATTTCACGGAGCATTTTACACCCCAGATTCCGGGCAGATAAGCATAGCTTTGGAGTATATGGATGGAGGATCACTTGCAGATATCTTGAGAATGCATAGAAGGATACCAGAACCTATTCTATCCTTCATGTTTCAGAAGCTACTACATGTAAGGAAAACAATCTTGTATTTGTGGTTTTTGCTTTCAGAAAACACTAGGATATGTGACTCTTGACCTTTTATCTTTTGGAAGGGTCTAAGCTATCTGCATGGAGTAAGACATCTTGTTCACAGAGACATAAAGCCTGCCAATCTATTAGTAAATTTGAAAGGAGAGCCAAAAATTACTGACTTTGGTATTAGTGCCGGCTTAGAGAATTCAGTGGCAATGGTTAGTATATTCTATCTGTCTCAGTATGTTGTCATGTATTGCTTCCATAAAATTGTTTTCAATGTCAATAATTTCATTGTCTGGTTGTTATTACAACCGTGTTGTGAAGTTCATGTTCATAAAAAGGAAAATTGCTCCTTTGCAGTGTGCTACTTTTGTTGGAACTGTTACATACATGTCACCTGAGAGGATTCGAAATGAAAGCTATTCTTATCCGGCTGATATTTGGAGCCTTGGGCTTGCTCTTTTAGAGTGTGGGACTGGAGAATTCCCATATACAGCTAATGAAGGCCCTGTCAATCTTATGTTGCAGGTGTGTGTGCAATACATACTGAAGTTATTTGTTTTCTTTTGTTTGATTGAACGTAAATGTTTGTCTGAGAAGAATATCTTCGATTGCCATTTTATTTTCATGTCTTTTTCTTATCACTTGTGTAAAAGCTTGTCACCTGAGATAATGACATTAATCACTCAAAAGGAAACAATGTGTATATAATTTAGCTTTGTAATAATGCAATAGATTTGGGACAAATGTGATGATTCATACCATGAGTTGTAAGGCATACAATGTAATCAATGATAAAGAAATATGTCCTAACCCTGTATGAATGGCCATTCCGTTTCAGTAATCTGATTTCATGCATGTATTTCTTCTCGCTGCAATTAATTGTACTTAATTTTGTGACAGATTCTGGATGATCCATCACCATCACCATCAAAAAACAAGTTTTCACCAGAATTCTGCTCCTTTGTTGATGCTTGCCTGCAAAAGGATCCAGACACTAGGCCAACAGCAGAGCAGGTGAGAGAAATGAGATAAACATTAATGTTATTAACCATATTGTCTAGCATTTGTGCTATGCAATTTTGTGGCTGTTGATGCTGAATGTTTTGTAACACTTCACCTAAAACACAAATATGTTGGTGATCATGCATTTTTTTTACTCTATGAAATTTGCATATTTTCCTTGTGCAGAGTAGATTGTTTTCTTGAGAATGTTATACAGCTTACCAAGTCAATCTTATCTTGAGACACTTCATTGGATATATTGTTATGCTTGAAGTTGATGATTCTGTGTTGTCCTAATGCAGCTGCTTTTGCACCCTTTTATCAAAAAGTATGAGAATGACAAGGTAGATTTAGCCGGATTTGTTCGAAGCGTATTCGATCCTACACAAAGAATGAAGGACTTGGCAGACGTAAGTGGCTGCCAATTTCTATCTTTAGATTATTTAAACTGGCATGCTTATGTCAACATTTTAGAGAATTAGAGATGCTGCAATTTTTCACTTTGCATTTTTCCTCTCCAGATGTTGACAATACATTACTACTTGCTATTTGATGGACCTGATGATCTGTGGCAACATACAAGAAACTTATATAGTGAAAGCTCGATTTTCAGGTGTGTACTGTCTTCTATGTTTTATTTGTGCATCAAGAAAATGTTACTTGTAACACTTTACTCTCCTTTTACCATGATTGAAAAAAAAAAAAAAAAAAAACAGAATATTTGCATGAAAGCAACTTGCTGCTGTAAGAGTAGCAGTTTGTATTAACTTACCTATGTTATGCATATGAAAATGATTTAGAATATTAAAAGAAATGGATGATGACATTTTATAAACTTGGTTCCAAGGTTTTTGAAAACCTTAACCACTAACAACATTATACTTGTACTTTTTGTAGTTTCTCTGGAAAACAACATTGTGGTCCAAGTAACATCTTTACATCTCTATCAAGTATTAGAGCCACACTGGTTGGTGAGTGGCCTCCTGAAAAGTTGGTGCATGTTGTTGAGAAGCTTCAATGCCGTGCTCATGGTGAAGATGGAGTGGCAATCAGAGTTTCAGGATCTTTTATAATTGGAAACCAGTTCCTCATATGTGGAGATGGCATTCAAGTAGAGGGGTTGCCAAACTTCAAGGATCTTGGAATTGATATTGCTACCAAAAGAATGGGCACATTTCATGAACAATTCTTAGTGGAACCAACAGGTCTTATAGGATGCTATTCCATTGTGAAACAAGAGCTATACATTAATCAGTAATGTTATATTAAGTTGTGCTGTGTTACTCAGAATTTAACACGCATCACACGAAGTGTCTTGGTTTTCAGAGAATCGTGTTCTCTCACGTGTAAAGTATACAAATTTTCTTGTATCTATGTTCTGAAAAATTGTTGATAGTGATATGAATTCGTTTAAATGGAATGTGTTCTCGTGTTTCCGCTA