Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18034 LG4 45311584 45314496 PREDICTED: NAC domain-containing protein 83
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   lipid biosynthetic process, cellular catabolic process, carboxylic acid biosynthetic process, regulation of transcription, DNA-templated, cellular lipid metabolic process, regulation of transcription, DNA-templated, lipid biosynthetic process, carboxylic acid biosynthetic process, regulation of transcription, DNA-templated, cellular lipid metabolic process, cellular lipid metabolic process, carboxylic acid biosynthetic process, regulation of transcription, DNA-templated, organic cyclic compound catabolic process, cellular catabolic process, secondary metabolic process, response to salt stress, organic hydroxy compound metabolic process, cellular catabolic process, organic cyclic compound catabolic process, lipid biosynthetic process, response to salt stress
Cellular Component   located in   nucleus, nucleus, nucleus
Molecular Function   enables   DNA binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, transcription cis-regulatory region binding, DNA-binding transcription factor activity
SNP Position Effect Amino acid change
A/G 45311620 synonymous_variant p.Asp147Asp
T/G 45311625 missense_variant p.Asn146His
A/G 45311630 missense_variant p.Phe144Ser
G/A 45311782 splice_region_variant&intron_variant
T/A 45311854 downstream_gene_variant
T/C 45311876 downstream_gene_variant
G/A 45311877 downstream_gene_variant
T/C 45311949 downstream_gene_variant
T/A 45311996 downstream_gene_variant
G/T 45312049 downstream_gene_variant
C/A 45312055 downstream_gene_variant
A/T 45312067 downstream_gene_variant
C/T 45312111 downstream_gene_variant
C/A 45312127 downstream_gene_variant
C/A 45312129 downstream_gene_variant
A/T 45312133 downstream_gene_variant
T/A 45312137 downstream_gene_variant
A/T 45312165 downstream_gene_variant
T/C 45312181 downstream_gene_variant
A/T 45312406 intron_variant
T/C 45312505 intron_variant
A/G 45312522 intron_variant
T/A 45312586 intron_variant
C/T 45312612 intron_variant
C/T 45312635 intron_variant
A/G 45312658 intron_variant
C/T 45312692 intron_variant
A/T 45312719 intron_variant
T/C 45312768 intron_variant
C/T 45312896 intron_variant
T/C 45312912 intron_variant
T/C 45312961 intron_variant
C/A 45313024 intron_variant
A/T 45313031 intron_variant
G/C 45313047 intron_variant
A/G 45313059 intron_variant
C/A 45313063 intron_variant
G/A 45313096 intron_variant
C/T 45313098 intron_variant
A/T 45313102 intron_variant
G/T 45313146 intron_variant
G/A 45313147 intron_variant
G/A 45313182 intron_variant
A/G 45313193 intron_variant
G/A 45313211 intron_variant
C/T 45313240 intron_variant
C/T 45313255 intron_variant
T/C 45313259 intron_variant
G/A 45313278 intron_variant
G/A 45313288 intron_variant
C/T 45313340 intron_variant
G/A 45313645 intron_variant
A/T 45313648 intron_variant
T/C 45313825 intron_variant
A/T 45313826 intron_variant
C/A 45313849 intron_variant
A/G 45313895 intron_variant
T/C 45313897 intron_variant
A/G 45313906 intron_variant
A/C 45313942 intron_variant
T/A 45313951 intron_variant
T/A 45313963 intron_variant
C/G 45313966 intron_variant
T/C 45314088 intron_variant
T/A 45314099 intron_variant
A/C 45314190 stop_gained p.Leu72*
G/A 45314226 intron_variant
T/G 45314240 intron_variant
G/C 45314305 splice_region_variant&intron_variant
T/A 45314311 splice_region_variant&synonymous_variant p.Pro62Pro

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18034.1
MEGLQEGFVVKGGIKLPIGFRFRPTDQELLLHYLKKKAFSQQLPASVIPICDVFQSEPWLLPENNANLIEINYMVGGNLAYQANSQSISWESDGDSMAVADFAVYVIFQKRKKMTKASQKRPFCSSKLQRVHDVEASIIDFEMEFGNDNIVLPPPSSPC*


CDS Sequence:
>Vu_18034.1
ATGGAAGGGCTCCAAGAAGGCTTTGTTGTAAAAGGGGGCATAAAATTGCCGATTGGGTTCAGGTTTCGTCCCACAGATCAAGAGCTTCTCCTTCACTACCTCAAGAAGAAGGCCTTTTCTCAACAGTTACCTGCTTCGGTCATTCCAATCTGTGATGTCTTTCAGTCTGAGCCATGGCTGCTTCCAGAAAATAATGCTAATTTAATAGAAATAAATTATATGGTTGGTGGGAATTTGGCTTATCAAGCGAATTCTCAGTCCATTTCTTGGGAATCTGATGGAGATTCAATGGCAGTGGCAGATTTTGCTGTGTATGTCATATTTCAGAAAAGGAAGAAGATGACAAAAGCATCTCAGAAGAGACCCTTTTGTAGCAGCAAACTTCAGAGAGTACATGATGTTGAAGCTAGCATAATAGATTTTGAAATGGAATTTGGCAACGATAATATAGTGCTTCCGCCACCTTCTTCCCCATGTTGA


Promoter Sequence:
>Vu_18034::LG4:45314496-45316496(-)
TTTGAGTAAAGTTATGCTGCCCATTTTGTATCATACTACTCCACACATGTCACTAAGGCTAGAGCATCCCGTATAGGTTTCCTTTAGTCACTCTTCCTTAAGAGTTTGTCCAACCTCTCTTGAGAGCTCCCAAACACCATCATCTCATCACCATTAAGTCATCAAAATTTGAGTCATACATCACACTTCTTATAGCTTCCGCGCACCATCATCATCTTTGAAGTCTCTAACTTAACTTGTGTCGTATAACTTGAAAGGAACCTTTCATCACATCTAGTCAAACCTGACACCTCTCCCCTAAAACCTCTTCATCATTACACTCTTCAAGGTTGCAGGGCTATTATACTTATAGCACGAGACCAAAGAAATATAAATTTTCTTTGCACATAAGGCACTAATATTAGCATAATGGCAACAACATAAAGACTCAAATATATACCATATTTAGCTTGGGGATAATGTACTACATACGTTCGAGAAAATCTCGACCATCCAAGCCTAAATGTACTTGGACCATATGTTGTAAGGACACATAATATGCCTTGGTAACAACATGACGAATGAGCTTACATCGTATCGGCTAGGTTAACTCACATGGCAAGTATTGACTAAGTTAAAATTATTGTTAAAGCATGATTAGTAAAGTAATGACAGAAAAATTATTGAGAGTAAGTAGTTACGTGGATCATACCAATGTAGGTAAAAACTCATAAATATAATATAAATAACAAAATATTCAAGTTCTTGCATTTATTATTGTCTAACAAACTTGACTAACTTAGTGTTGGAATATATTCTAACAAACACATCTCTTTCGATCCATGAGAAGATTGACAAAAGACATCTTGATCCAAAAGTGTGAAGTTAGAGAGGAATACTTTTAGAATCTTTGCCATATATTCAACTCTGTAAGAAAAATAATCAATGCACCCATTTTTATTTTCAAAAACTTAACTGTGAACATTTTACATCTTTGGTTAATTTATGCAAGAGGTTTCATGTTTCCGAATTTGGGTGAATTAAGGTTGGAGAATTTAGCATACACGTGAGAATTGAAGTCGTAACGTGTTACAATTTTTACTTCTATTTATTCAAGTATTCACACTTGTTCATTACGACTTCAGTTAAGTTAATATATTTTTTTTTTCTTATTTTAACTGAAATTGTATTAGAAATTATGACGTTATATAACTTTTAATTATTTTTAACCATACAACAATATTAATTATTCACACACATAAATATTTATAATGAGATAATGTATTTTGGTTATTTTATTTTCATTATTTTTAATTTCTTCGTGTTTCTATTAATATCATCACAACTTTTTCTTCGCTTTATTATTTTGTCATACGTTAAATTAATTAAATTAATTAGTTAAATGAAAAAAAAATCATTAAACATAATAGAATAAAAACTAAAAATGAGTTTACTTTAAACAAATTAAAAATACATTTAAATAAACAAATTAAGAAAGAGTTTACAATAAAAAAAACATTAAACTGAAGTCTGCATAACTTCACACTTAAAAATAAAAATCTAAAATGAACGCTCCAGTTGAAACAGAAAAAAAAAATTACTGAATTCTCGTCATTAATGTGAAAACTTCCCTAAAAAAAGATACACGTTATTCGTCTTCAACTATCTTAAAGTCTTCATCCCTCTTACAACTTAACCCAATTTCCTAAAATTAAAAAAATCAAACCTCTTTACGTAAATTGAAAAGTAAATTAACCTAAATCTTACTCCCCAAATTAGTTACTAAAAAAATGAGCATTTCTAGTGAACATGCCTATTGAGACCAAGCATTCTCTCTCGTACACGTCCTTTACCAGGATGTTGCGTCTATAAATTGGAAACCTTTGCAACCACGACTTCTGAACAACCCAATTATCCTTTGTTGTGTGCTTCCCGTGAAATAACACACGTGGGTATCGTTCTCTGATGCAAACTTGATAGAGAGCTTCTTTCGTTTATCAGTTTTCTCTTTCGTTCCAAAG


Gene Sequence:
>Vu_18034(-)
ATGGAAGGGCTCCAAGAAGGCTTTGTTGTAAAAGGGGGCATAAAATTGCCGATTGGGTTCAGGTTTCGTCCCACAGATCAAGAGCTTCTCCTTCACTACCTCAAGAAGAAGGCCTTTTCTCAACAGTTACCTGCTTCGGTCATTCCAATCTGTGATGTCTTTCAGTCTGAGCCATGGCTGCTTCCAGGTTCCTTTCATTCTTTCTTTCTTACTTCTTTCATCAAAATCCCTTCAATTTTCGATCTATCTTTGTTTCAATTTCGCCAATTTCTTGTAGAAAATAATGCTAATTTAATAGAAATAAATTATATGGTTGGTGGGAATTTGGCTTATCAAGCGAATTCTCAGTCCATTTCTTGGGAATCTGATGGAGATTCAGTAATTCAAAACGTTGAATAGAAAGTTAACATTGAAATGTTTCGGTCAATTTCTAGCATAGACGAATAAAAAATATACTTTAATAGAATTTTTGTCTTAATATCGGAGGGTTTATTTAATATTATTTTTTTTAATTTATTTTATTCTTAATTGATATTTCATTTTTTAAAAGAGTTTATGTAGTTGTTTCAGTTAGATTAATGTTAACATATTGGAAAAATAATCAAGGAATTTTGTAATCTTCCAATCTTTTATCTTTTTTCTGTTTCGACTCACTCCATCTCAAGATGAATAGAAAGAATTGAAATAATACAATCTGAAATAGTGAAGAATTAAAAAGATTTAGAGTCATTGACACGTGATTTTTCTTTTAAACGATATCAACACTAATTTAACAAAATAACTATATTAATTTCTTTTAAATAAAATGATATTTTAAATAAAGAAAAAAAATTGAATGAACTTAAATATTACGACAAAAAAAAACTTATTAAACAAAAAAAAATTATCAAAACTTCCATAGAATTCGAACCCCCGATAGCAGCCAAATTCGAGATAAACCGATGATGAAAAAAATAGACTGAAATTCAGTTATGGAATAATCGAATTCCCTCTTGATGCAATATTTGATGCTATTCTAGAAAATAAATTTAGAACCTTGTAAATTTTTTTGTTAAAATAGTAATATCGGTGGAAAAATATCCAATTTGGCAAGTGATTTTGGTAACCATATTAACAATGAGCCACCATAACAGAAACATTTTTCGCTCGAATCACTGATGAACAAGAAATTTTCATTATACTTTGATAAATCTTTAAGCCAGAATGGTCCAATAACGGCCGGTGAAATAGAAGAATAAAATGTCCACTTAGAACTCGTTAGAATAGACTCTATGACTCTGATATACCATAGGTGAATTTAAGCTTAACTTAATCCCACAAAATCGGTTTATAAAGTGAGGTTTGCATCTCCCTTGTATATTATAATTTGACCTTATCTCTAGTCGATGTGATACTTCCGTCACTTTAAGTGCTAGAAATGGAAAATATGCGTAGTTTTCCTTGTTGAAGCATGATATTGAACTATTTTTGGTGAATCGTACTTGTAGGTGATTTGAGGGAAAAAAGGTACTTTTTTAGCAATTGTGGAAAAGTGAACAAGAGAAGTGCAGGTTCAGGTTGTTGGAAATGTGTTGGAAAAGAAAAAGAAATAAGGGTTTGTGAAAACAATGAAGTAATTGGGATGAAGAAAACAATGATGTTCTGCAAAGGTTCCCATGAAACAAGAACTCGCTGGGTCATGCACGAATTGCGTCTTCTAACTTCCTACCCATATCATCAGGTAAACACAAATTAAGGACACTTTTAATATTTTCCGGAAATTTTATTATTTTACTTTTTGTTTTTTTTCGAAAAAAAATTAGGTGTTGAAAATTTTCTTTTCTGGTTAAAAATTATTGTTATCATAAATATATAATATTTTGTTCTTCTTGAACTATTTAATGTGGGAAATATATAATATATTTAAAATTATTGTTATCATAAATATATAATATTTTATTGTTAAAAATAATATTTTATTCTTCTTGTAAAATATTCATTCCTCTAATAATACTCACTTGAGTAATTTTATTAGGAAATTATTAAGCCACGTAACTGGAATGCTTATAGAATCGACAATGATATATATTCACTCTAATGATATTTATGTTTAAAATATGTATTGAGAGAGATTCGTTTCAATTTTTTTTTAAACTATTCTTGTTTTACTAATATTTATATAAGTTAAGATTTTCCATTAAGTTTTTTTACTGTCTTCTGCTAAACATGAAAGATGCACTGATATTAATATTTTAAAAATCTTTTTAATATATCTTAAGACATCAAAATCATGGTCTGTCAATGTATTTTAAAGATACACGAGAGAAACAATATAAAAAACTCAACTAAAAATTTCAAATTCTATTTATATCTAACAATTAATATGCAGTGTCCAAGTATAAAATAGAAGAATAAGAGTTAAATATATTTTTTATTCTTAAACTATAATATAAAATTAAAATGATGTTCCGCTCTTAAATTAAATTATAAAATATTTACTCTTTATATTTTAAAGTAATGCAAAACATTTTATATTGCAGAAATTAAATGTTTTATAATTTATTTTGGAGAAAAAAAATATAATTTTTTATAATAATTTAGAAAGAAAAATATTTAACTCAAAAAATAACTACTACTCACCATGAAATATATTTAGTAGCTTTAATTCGAACAAGAGGGTAATGTACCTAAGATGCATTATTGGCTATACTTTTCCATAAGAATTCATCCATTCTCCTGCAGATGGCAGTGGCAGATTTTGCTGTGTATGTCATATTTCAGAAAAGGAAGAAGATGACAAAAGCATCTCAGAAGAGACCCTTTTGTAGCAGCAAACTTCAGAGAGTACATGATGTTGAAGCTAGCATAATAGATTTTGAAATGGAATTTGGCAACGATAATATAGTGCTTCCGCCACCTTCTTCCCCATGTTGA