Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_18063 LG4 45846655 45849538 hypothetical protein LR48
 Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   hormone-mediated signaling pathway, hormone-mediated signaling pathway, jasmonic acid mediated signaling pathway, positive regulation of transcription, DNA-templated, positive regulation of transcription, DNA-templated, regulation of defense response to fungus, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, jasmonic acid mediated signaling pathway, regulation of defense response to fungus, positive regulation of transcription, DNA-templated, hormone-mediated signaling pathway, response to jasmonic acid, hormone-mediated signaling pathway, regulation of defense response to fungus, positive regulation of transcription, DNA-templated, response to jasmonic acid
Cellular Component   is active in   nucleus
Cellular Component   located in   nucleus
SNP Position Effect Amino acid change
A/T 45847146 downstream_gene_variant
A/G 45847148 downstream_gene_variant
A/T 45847156 downstream_gene_variant
C/T 45847161 downstream_gene_variant
A/G 45847185 downstream_gene_variant
C/T 45847188 downstream_gene_variant
T/G 45847253 downstream_gene_variant
G/C,* 45847262 downstream_gene_variant
C/G 45847265 downstream_gene_variant
T/C 45847268 downstream_gene_variant
T/A,* 45847272 downstream_gene_variant
C/T,G 45847273 downstream_gene_variant
C/T 45847281 downstream_gene_variant
G/A 45847292 downstream_gene_variant
G/C 45847295 downstream_gene_variant
G/A 45847297 downstream_gene_variant
C/A 45847300 downstream_gene_variant
A/G 45847304 downstream_gene_variant
C/T 45847308 downstream_gene_variant
A/G 45847379 downstream_gene_variant
A/C 45847491 downstream_gene_variant
T/C 45847509 downstream_gene_variant

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_18063.1
MEDAQARNSNDGDDNGGSGSKRKGPVLRRAMATQTQDEAMVGSSPATPCGACKFLRRKCIGGCIFAPHFGTDQGAAKFAAVHKVFGASNVSKLLSNIPANRRQEAATTISYEAQARLSDPVYGCVSTILALQQQVASLQAELAMLQTQVMNSKLAYASALHTTQLQQPNMNAGALQPAYSNNSCASTNLMNLSSFNNNPAAFDLAMDTAPSSNTLEPLQLTRLSKCEEEDEEESRTQLAFNHH*


CDS Sequence:
>Vu_18063.1
ATGGAGGACGCACAAGCTCGTAACAGTAATGATGGAGATGACAACGGTGGATCAGGAAGCAAACGTAAAGGTCCTGTTTTGAGGCGTGCCATGGCAACACAAACGCAAGATGAAGCAATGGTGGGATCTTCACCTGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGAGGGTGCATCTTTGCACCCCACTTTGGCACAGACCAAGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTCTTTGGCGCTAGCAATGTCTCAAAGCTCTTGTCTAACATTCCGGCCAACCGCCGCCAAGAAGCAGCAACAACCATATCCTATGAGGCTCAGGCAAGGCTCTCCGATCCGGTTTACGGTTGTGTCTCCACCATCCTTGCTCTGCAACAACAGGTAGCATCTCTACAAGCAGAGCTAGCTATGTTGCAAACTCAGGTGATGAATAGTAAGTTGGCCTATGCAAGTGCTCTTCACACAACACAACTACAGCAACCAAACATGAATGCAGGAGCACTACAACCAGCATATTCTAACAACTCATGTGCTTCCACCAACCTTATGAACTTGAGCAGCTTCAACAATAACCCTGCTGCCTTTGACCTTGCAATGGACACAGCACCCTCATCAAACACTTTAGAGCCTCTTCAACTCACAAGACTGTCCAAATGTGAAGAAGAAGATGAAGAAGAAAGCAGGACTCAGCTAGCCTTCAACCACCATTAA


Promoter Sequence:
>Vu_18063::LG4:45844655-45846655(+)
TTACCTTCTCTCCTAAATAATCCCAAATATAGAAAAATCTAAACAATTAGTTTCTTTAATGTTAGAAATAATGCTAAGTAGATGCCAAATATTAAAAAGTACCCTTCAAATTGATTCTTAAATTATATTAGATATCGATTTAGGGACTAAAAATAATATATTTACTATTGAGAGATTACTTATATAATTTTATTGTTTTAAATTTGAAAGGGGAGTAATACTTGATTGTGGAAATGGATGGTATATTATAAGTAAGATCAACATTGAAACAATTACTACAGGAAAATTTCAAAAGAAAATATAATTTTTAGTGACAAAAAATATGTTTAGACCAATTTTCTTATTAGAGACCAATTTCTTTGATAGTCAAAATCTGAGTAACTAATATTAACGACTAATTTAAAGATCAATTTATAATAAAAATCATTTTAATTACCATTTTAGGAATCAATTATAACTTTTTATACACAATAAAAATGATTTTAGTTATTAATAATTTTTAGTTAATAAATTAGTATGTAAATTGGTTATTACAGTGACTAATTAGTTTTAGTCACTAGAATTAGATTATTATTTACGAAGTTTCGCAGCGAAGTGTGTCATGATTCATTATCATGTGTTAAGGGTACATATGATCAGCACAAACAGTAAGAATTATCTATCCAAACATGCAACTAAATTTTTGTCAATCAATGTAAACTTAAGGGGATTTCAAAGAAAAAAATTAAATTAGAATGAATAAGTAAAAAATAAGGTACACATGAATAAGATTGAATAAGATGATAAGAAAATCCATAATAACTACCTTGCGAGTCAAAATTGCATTAGTATTGGTAGATTTTGATGTCTTATTTTTCATGGATATTAATATTGTAAATTATTTTTGTTAAGTAATTAAAAGGTATAATTAAATTCAAAGTTCTTAATAAATTTTAGCTTCAGGATGTGCAATCAAAGAATATTTCTTTACACTTTTTAAGGGTCACCTCGCTTTATATCTAGTTTATGTTACAATTGTTCAGTCTTTTTTCTCGAAGTCGAACAATGATGTATATTTCAAAAGATACTTTAACCCTTAAATCATTGAATGAATCTAATTGATTATCAAAATAAAGTAAATAAATACAATCATATACTTCTTTATTTTATTTTTGTATTTATTGATTATCAAAGTAAAATCAATAAATATAATTACTTACCTTATTTCTGTAGTTTCTGAATATTTTAATTATGATTGCCCAATTAAACGACTAAGCAATACATTGTTTAGATAACTTAGTCCTCGGTATTTTATTAAAAAATTAATAAAAAAGTATGTCATCACGTTTGAACAGATGTAGAACTCATATTAAAATTAAAATTAAAAGTCTGATGTAGAAAATCCCATCATTATATGTCTTCACATTTTGTTTTGGGTTTATCTTAATGTCACACGCGGAGTACTACTACTACGATATATGCAAAAATAAAATACAGCTTTTTCCATACATAGATTCTCCCAAAAGTAGAAAGTCTAACAATTTCAAGCTCATTCTTGATGACTTAAAATGGACCCATTTCACTCTTATTCTGTTGCTTACAAGATGAAAAGAATAAAGAAATTGAAAAAAAAAAGAGAAAAATATAATCTTGAATGAGGTTTTATAGCCACGAGAAGCATGCACTTTTGGTTCTACCACCCCACACGCGAAGAGCAACAAAGACTGCGTAGTTCTTGTGTTTTCCCCACAAAGACAACCTTTTCAAGTTTAACGTTTCATCCTTAACACAATATTATAAACATAAATCTAACAAACATGCAAACAGTAACAAGATTTTCATCATATGCACGTGGTCCCTCACATACTCCCTCACCAACCTCAAACGTCTTCTTTCTCAAACCATAACATCACAAGACCAACGTGCACTTCCCCCACACAACATCCCGTATATATAAGCATCAACACCATCCCATTCCCTTTGACTCTCTACTACCATAATACTCCAACAAACTACCAGAA


Gene Sequence:
>Vu_18063(+)
ATGGAGGACGCACAAGCTCGTAACAGTAATGATGGAGATGACAACGGTGGATCAGGAAGCAAACGTAAAGGTCCTGTTTTGAGGCGTGCCATGGCAACACAAACGCAAGATGAAGCAATGGTGGGATCTTCACCTGCAACACCATGTGGGGCTTGCAAGTTCTTGAGGAGGAAGTGCATTGGAGGGTGCATCTTTGCACCCCACTTTGGCACAGACCAAGGTGCAGCCAAGTTTGCAGCTGTGCACAAGGTCTTTGGCGCTAGCAATGTCTCAAAGCTCTTGTCTAACATTCCGGCCAACCGCCGCCAAGAAGCAGCAACAACCATATCCTATGAGGCTCAGGCAAGGCTCTCCGATCCGGTTTACGGTTGTGTCTCCACCATCCTTGCTCTGCAACAACAGGTACTGTTTTTTTTTTTTTTTTAAATGTAATGATTTTATAATATACAACAAACTTTAACTAAAATAATAATATCAAATATAATTTTTTTACACACCTAAATTTTCTTTACATTTATTTATTTCACACTATCCTTCTTTATATTTTATTCTCTTTTTTCTTTTGAAAAAATAAAAAAATTTACACTTTTATAACCATTTTTTCTTTGTACTATGTATCAAATGAACGTAAAAGTGTGTCGAGTACATTATTTCAATAATAATATATACAGAGAGAGAGAAGGGAACGAATTCCTAACACCAACTGTTCCAGTATGGCTTATCCATCACTTAAGAACATGTATGTTGTCAATGAATTAAAACTAAGCATAATGTTTAACCTAATTTTAGTTTAATGTTTATATACTGTATGATTATGGTAAAAAACTAACAACAAAATTATTAGAGTTGAATAATCGTATGAACTATTTTTCATCCCTTATCAGTTTATTATATATTTGTAATTAAATGAAATGTAAATAAAAAATTATATATTCTTTACACTTGTGTATGTATTATTAGGACTAAATTTATCTTTTGTTCTCCATATTTTGAATACGTATTTTTAGTCTGCATAAAGTTTTAACTATATATTTAATGTTTTATTCTGCCCTTAAAATTAAAATTATGTAATTAAATTATTCAACTATCTTCATTGATATTTGGGAGATATAAAGTTAATTTTAAATATTTGAAAAAAAAAAGATAAGAGAAGTTGTAGATTCAAATCTTTCTACAAACAAAACTAGTTATTAACATTTGTTTGATAAAAAAGGCAATTAGGTTTCGCCGTTAATAATTATTATTAAAAAGGAAAATTTTATATGAACAGCGTTAAATCTTTCTATTCTTAAGTATCACCTATCAAAAACTCATATTTTTACTTTTGTATTTAGTTTTTTTAGAATTATTTTATATTTTAAAATAAAAATATACTTTATTGGTATTGTGTAGGTGTAGATAGAAATGAGAATGTCATATATCATCATGCATAGTATTAGTATTGTTTAACAATATACACATCACTTACTATAACTACAAATTTTTTTTGTTTAATTTTGAAAAGTAAAATGTAATATTAACTTTTATAGAAACTAAATTTGTACATTGACAAAAATATTTATTCTCTTAAGAAAGATAATTATTTATTCATTTTTTAGGGGTATTATTTTCTAAATGTTAGAAAAAGAATTCATGAATATGGTTCCTACAGTTTCCATTGATTGTGGCTTTTCTCAAATATATATTCAATGCGTTTGTTTCTTTCGTGGTTGACTATATGTTATTTTCATTATCCAAAAAGTTTGATTTTTCAATTAAAAGAATATAGGTATACAATAAATAAATTATATATAAGTCACACTAAGTTTAATTCTTTCTATTTTCAGTTTATATGTATTAAATTATTAATATATTTTCCTAAGCAAGTTGTGAAAAAAACGTTTCTTTAGTTCCTTTATTAAAGGATGGGTCAAGATCGTGTTATTCAATTGGCAGTTAGATCGCAAATGATATCGCATTTTCTTACCCTTTTAAATAGATCATTGCAAAAACTGGGGTGCTATTTTGTGATTTTAATGTCTTTAATTGCTTGAAATTTTATTGTATGTGGTTTAAAACAGAAAACATATATTTTTCTTTTCAAATAAGAAAAATCCCACTAATTTTCTTTTATATTCTAGTTTTATTTGAATTTTTTTGCGTATAACCCTACAAAGTTATTATCTTAAAATTTTAAATTAGAGGTGATTCCATGATTTTTGCTCACATTTTATTAATCTCTCTACATCTCTTCTCAACCAAATAAAAATCAACATGATAATGAATTCAATAATTAAAATTAGGTTTAAAGAAGTTTTACCCATATATTTTTGAAGAAAAATTTAAAGTAAGTTTTTTATAAATTAAAATTAATTTTGTAAAAGGTGTCGATATAAATTATCTAAAAAAATTTATTTTAATTTTGGATTACAAAGTGTTTAGAGGAAAATACTCTTTTAAACATACCATACTCTAAAATTATTAAAATTACTTTAGACTTGTAAAAACTATGGTTAACAAGTTTAAGTAGTCCTTCATTTTCATCCATGAAATAGTTAAGTTTTGTCCAATTCAGGTAGCATCTCTACAAGCAGAGCTAGCTATGTTGCAAACTCAGGTGATGAATAGTAAGTTGGCCTATGCAAGTGCTCTTCACACAACACAACTACAGCAACCAAACATGAATGCAGGAGCACTACAACCAGCATATTCTAACAACTCATGTGCTTCCACCAACCTTATGAACTTGAGCAGCTTCAACAATAACCCTGCTGCCTTTGACCTTGCAATGGACACAGCACCCTCATCAAACACTTTAGAGCCTCTTCAACTCACAAGACTGTCCAAATGTGAAGAAGAAGATGAAGAAGAAAGCAGGACTCAGCTAGCCTTCAACCACCATTAA