Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19356 LG5 4791596 4796812 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   positive regulation of defense response to bacterium, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of transcription, DNA-templated, regulation of salicylic acid metabolic process, regulation of salicylic acid metabolic process, positive regulation of defense response to bacterium, positive regulation of defense response to bacterium
Cellular Component   located in   nucleus, nucleus, nucleus, nucleus, mitochondrion, nucleus, nucleus, mitochondrion, nucleus
Molecular Function   enables   DNA-binding transcription factor activity
SNP Position Effect Amino acid change
T/C 4791630 synonymous_variant p.Gly210Gly
A/C 4791718 intron_variant
G/A 4791847 missense_variant p.Ala165Val
T/C 4791986 intron_variant
A/C 4791987 intron_variant
T/C 4792224 intron_variant
T/A 4792558 stop_gained p.Lys97*
T/G 4792562 synonymous_variant p.Thr95Thr
G/A 4792582 missense_variant p.His89Tyr
T/A 4792624 intron_variant
A/T 4792663 intron_variant
T/C 4793086 intron_variant
A/T 4793102 intron_variant
T/C 4793106 intron_variant
T/A 4793129 intron_variant
A/G 4793407 intron_variant
G/T,* 4793426 intron_variant
C/T 4793671 intron_variant
T/A 4793715 intron_variant
A/T 4793723 intron_variant
G/A 4793732 intron_variant
A/T 4793928 intron_variant
C/A 4793954 intron_variant
T/C 4794078 intron_variant
A/G 4794098 intron_variant
C/A 4794153 intron_variant
T/A 4794220 intron_variant
C/A 4794234 intron_variant
A/T 4794369 missense_variant p.Val70Asp
T/A 4794475 intron_variant
T/A 4794481 intron_variant
C/T 4794541 intron_variant
G/C 4794577 intron_variant
T/C 4794588 intron_variant
T/C 4794590 intron_variant
A/T 4794596 intron_variant
C/T 4794608 intron_variant
C/A 4794660 intron_variant
C/T 4794669 intron_variant
T/G 4794671 intron_variant
A/T 4794720 intron_variant
G/C 4794737 intron_variant
T/A 4794821 intron_variant
G/A 4794825 intron_variant
G/T 4794829 intron_variant
C/T 4794835 intron_variant
C/T 4794873 intron_variant
C/T 4795005 intron_variant
G/A 4795077 intron_variant
C/T 4795126 intron_variant
A/G 4795146 intron_variant
G/A 4795374 intron_variant
T/A 4795408 intron_variant
A/T 4795523 intron_variant
C/T 4795531 intron_variant
C/G 4795537 intron_variant
T/A 4795542 intron_variant
T/C 4795609 intron_variant
G/A 4795666 intron_variant
T/C 4795785 intron_variant
C/G 4795883 intron_variant
A/C 4795888 intron_variant
T/A 4795889 intron_variant
T/A 4795917 intron_variant
T/A 4795926 intron_variant
A/C 4796054 intron_variant
A/G 4796116 intron_variant
A/T 4796200 intron_variant
T/C 4796221 intron_variant
C/A 4796325 intron_variant
C/T 4796468 intron_variant
T/A 4796508 intron_variant
A/G 4796517 intron_variant
G/T 4796786 synonymous_variant p.Leu9Leu

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19356.1
MVSLRRRRLLGLCSGNSSFVTPLPLYCENLSSLENSTQQAKPKSEQPVLSDDASNLDSNTAVLEEPGSSNVSGSSSSKEQLIQPITAGPPIKRRKRHRRKNLHNQEPCLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKRELSKFKWDDFLAMTRQAITRKKHKRRLSPGPGNSHDMLPLPKDDWDSKQGVSEDAE*


CDS Sequence:
>Vu_19356.1
ATGGTGAGCTTGAGAAGGCGCAGACTCTTGGGACTATGTTCAGGAAACAGTTCCTTTGTCACTCCACTCCCTCTGTACTGTGAGAATTTGTCTAGTCTTGAAAATTCAACCCAGCAAGCTAAACCCAAGAGTGAGCAGCCTGTGCTTTCCGATGATGCAAGCAACCTGGACAGTAATACTGCTGTGCTAGAAGAGCCAGGATCATCAAATGTTTCTGGTTCAAGCTCATCAAAAGAACAGCTTATTCAACCAATCACAGCAGGACCTCCCATTAAACGCAGAAAGCGACACAGAAGAAAGAATTTGCACAACCAAGAACCATGCTTAATGAGAGGTGTATACTTCAAAAATATGAAGTGGCAAGCCGCTATCAAGGTGGACAAGAAACAGATCCATCTAGGGACTGTTGGATCACAAGAAGAAGCTGCTCATTTATATGATAGGGCTGCTTTCATGTGTGGGAGAGAGCCCAATTTTGAGCTTCCCGAGGAGGAGAAGCGCGAACTTAGTAAATTTAAATGGGATGATTTCTTGGCAATGACTCGACAAGCCATCACTCGCAAAAAACACAAGAGAAGGCTTAGTCCTGGACCAGGTAATAGTCATGATATGCTTCCACTGCCCAAAGATGATTGGGACAGTAAGCAAGGAGTGAGCGAAGATGCAGAATAG


Promoter Sequence:
>Vu_19356::LG5:4796812-4798812(-)
TATATCTTATTTTTGTATTACATAAAGAACGCACAATAATGTTTCTTCAGTGTTTTGTTTTATTGATATTTTTATATAAACTAAAATTTAGTAATGAAATAAAACGGAAAAAAAAGAAGTTTCTTTTATAATTAATGCCAAGACTTGTACGATGAATTGAAAATTTTGTGGAGATAGATTAGTATAAAAGTTGAAATGATATTTAGAAATAGAAAATGTTGAATTTTCTAAGTGTACATCTTGATGATGATTGACTGAAATATGAGTGTTAATGGGTGAGAATAGAAAGGTGGAGTGAAGTCCGCAAAAAACACCAGAAAAACAGCCGCTATAGTACAAACAAACACAGTGAATTATTGTACAATTATAGAAATAGATAGGTAATAGAGAGGAGGGCAATATGGGAAAGAAGATGTCTCAAACGTAACTAACCTCAGTGGTATTTGTTGGCTCTTTAAAGGGTAACATTGACATTGAACGCTATTAAAGTAGGAAGAGCAGCTATTAGTTACGTTCTCATTCTATTTTTTCAACCCTCTCTTTCTCTTTCTACAAAGACTTTCTCTGTCCACAACCATCATACCATTACACCTTACCTTACCACCCCTTCCACCACCCTTTTCTCTCTTTTATACCCACATCACAACACAAGAAGGAAAGAGAGAAAGAGTGAGAAAAACAAAAACAAAAACAAAAGGTGGTAGATGCATGAGCCACAACACAACACAACTCACATTATCTCATACCACACTCACCACCTTCTCTTCCCCCAAAATTCTCATAATTCTACCTCTTCTCTTACCTTTTCCCTTCAGATTTCTCACCACTTCTCTTCTCTCCTGCCACCTTATCCCACCCTTTTCACTTTTTTTTTTCAGGTATATTTGCCAACAACAATGGCTTGTTTTTCCTTCCTTTTTCTCTGTATTTTTTTTGTCTCTTATGTTTTTGTCTTTCTGGAGGTTATTTTTTTTTCACCTCTTTCTTTCCTCCTTGGTGTGTGATGAGATTTCTGGTCATGGGCATTTTGAGTTGACTGCTCAAAAGCCTAAAGACTTGGTCTTTCTCTTCTTGGCTTTTCTGGGTGTCTTCAATTTTCTTTTGAATGTGTTATTTGGTTTGTGTTTGTGTGAGGTCAAATGGGTCTGTCTTTGCTGTTACCGTCCCCCTTCCAAGAAAGGTGGTAGGTTGATGGGGTTGACTTCAACCTAGAGAGAAAGACTTGGCTCATGTGCGTGCTTTTTGTTTCCAAAATTGGATTCCATATAATGTTGTTGGAGTTTTCCTTAGAAAAACCAGGATATTGTCAACTTTGTTTTCAAAAAAAATGTTTTTTTTTCTTTGAAAATAGTTTTCACCTTTCAGTTTTGAAGGGGTTGGTGATACTTCTTGTTGTGATCAAATTGGATTGCTGATTTGAGCAATTGTTTACGGAGTTTGTTCTTGAGTGGTTGGAATTGTGTTATGATCAATGTTTCTCTGCATTTGTGTGTTTGTTTATGGAAGTTTTGCTAGATGAAACACAGGATCACTGTCTGCACTGCTTAAAAGTCAAAGCAGGATGATTTGCTAAACCTTGTTTTGTTGGGATCTAGTTCTGAATGTGTAATCCCGTGTTTTCCCTTCTTTACTTTTCACTTCTGATCATTTTTATCTATTTTTGGTCCCAGAACTTGGAAGAGACCATTTCTTTTTGTGGCATAAATAGTCATGTGCATCTTCTAAGACACCTTTTGTCTTTTACTCATTGGCTGCAAAATTATTTTCTTGTAGACTTGATAGTAAATTTTTGAATCTCTGACATGACATTATTTGGTTTTACAACATGGAACTGATCTTGGAACTTTCGTCTTTCCTTGTAGGTCTATCTTTCATTTTCATCTGCCTGAAACATTCCATTTGTGGTGCTCACCCCCCCGGCTGAATTGAAGGAAAAAGTTGGTATTATACGAAATTAATCACCGTGATTTGATGACTTGGTAAGAAGACTTAAATTAGAT


Gene Sequence:
>Vu_19356(-)
ATGGTGAGCTTGAGAAGGCGCAGACTCTTGGGACTATGTTCAGGTATGGTAAACATGTTTATCTCAATTGTTGCAGAATACTTTTATGAACTGTGTCTTAAACTTAACTGACATTGTTTCAAATATATTTTTTCTATTGCAGGAAACAGTTCCTTTGTCACTCCACTCCCTCTGTACTGTGAGAATTTGTCTAGTCTTGAAAATTCAACCCAGCAAGCTAAACCCAAGAGTGAGCAGCCTGTGCTTTCCGATGATGCAAGCAACCTGGACAGTGTAAGGACAACATTACTAATGATAGATGATTATATAAACCTTTTTTTTAAACTTTAATTTGGTTTTTCTGTGAGTTTACTTCAGGTTTTTTGACTTGGTATCTGTTTAGGACATCTTTTATTTTGAAGTCCATTTCAACTAGCTACATATCAGATCATTCAAACCTTTACTTTATTTTGTTATTACAATGCTGTAAATTCAATTTAAATATCCAGGTGAGGAAGAAAGTTTGGCATCACTTATGCATTCTCTATCTTCATTTGAACATGTTTACTTAAAGGAGAATTCAACCAATGAGAATTACTCAAATTGATTTCAAGAGTACCAGCTTTCGAATAATGATTCATTCTGAATCTCTGGTTATTATCATTCATCTTTACAACATGGGTATGCCCAATGTTAAGTGGTTGGTTGGACAACTCTTTTTTTTTTTCTCTTTTTTCAGTCATTTTGGGTAATTGGTTGGATAAATTTGGTGGTCCAACTATCTAAATTTATTTTATAGACTTTACTAAATAAGGTAAAAAGGCCCTGAGTAACGTTTCATCTTGTCTTCAAATCTTCCTTTTATTTGGAATGTTTTAATTTTAATCTCTGTACATTTAAAGACTAAAACTCCTGCACAATTTACAAGTCTGCCTTTTGTCTGAATATTTGTTGAAGTTTTATATATTTGGATTTAGTTTTTGCCTTCTGTCAATCTTCCAAAATGTTCGTGCCTAATCCTAATATGAAAAATTCATACTTAGTAATTATTGGGCTTAATTAATAATTTACCATGGGTGTGATAACTTGCACACCAGAGGCACATTCTACCCAGTTCTTATGTATTAGGTAAAAGTTGTCTCTATGTTATAATGCCTACACTGGACACAGACAGAACTGTCTTGTGTGATGCTTAGAGTTTTAAGCAGCATTATGTGACATTCAACATAGGAGCATTATGTGATCATCATCCATACTCTTTCTGTGTGTTCTCCAGCTGGGTGAATAAGTTAGAAGGTTTTTGTTATTGATTTTTTGACGCCTCTTGTTTATTATCTTCCAATCTTTTCAGTTTTTCACATCATCTTTGTGCATTGATTCTGGCTTTTTGGGTAAAGCCAATTTGAGTGTCAGTTGCTCCCTCCAAGGTCAAATCTTTTGCTTGCATTGCTTTTCTAAACCACATTAATATCAGTGATATATTTCAAATTCAGAAAAGCTCTCAAGTTGTCTCCTAGTGATTGCGTCTGAAAATGGTTTTCATTTGTTTTTGCACTGGTCAGCAGTTTCCCTTCTCTGGAATAACTTGTTTGGTGTTGATGGGTTTTCTCCTGGATCATAAAAGTACCTCTGTTAATTTTAGAGGACTCAAAACCAATAGAGATTTTCTAAGGTTTCAGAATTGTTATCAGATTGTGGTTATTTGGTGTATATAGTCAGAAAGAAATTCTGGACATTTTTACTGCTTTATTGTTTTCTCCTGAGTTCCTTTGTGACTAACTAGTTCACTTGGCTTCTTTGTGGTGTTTTTCTAATGGTCTTCTTAGGGGGTGTCTTTGTTAGATGTACAGATAGATTGATATGCATTACATGTTTTATGTTCAAAGTTGTTTTGTTTCCTTTCATGTCATCCTGCTTTTGCATTTTGTTTTTCTGTTTATTAAAACAAAAGAACACAGATGCTAGTAGAGGTGGTTGGTGTAGTATATTGGATGAGATGGTATGCTGGCGTGAAAGTGTAAGTAATAAGTCCTATATCAAATAGACGAATTGGGGTGTGTTTGTTTTGTCTGGTTCAGTAATGTTCATTGGAGCATCTATACTTTCCAATTCATAAACATAATCATTCCCATTTCTCATAGGATAATTGTTCATGTATTGATATGCTTTTGCAGGGATCTACTACACCAACCACCTCTACTATGAAGTCTTATCCTATTTTGTGGGGGAGGGTTATTTGATTGATACCTCACAACTCTATCTTTTAATGCCAGAATTAAGAAGTTTTTACTTGGATTACCATTTACATGTTGATGAATTAGATGTTTACTAAGTTGATATGATTAGAAAGTTAGCTCCATGGTATTTTATGTGTTATTTAAATCTTGACAGCCAAAAGCTTAAACTAACCTGTTTTATCTTAACCAGAATACTGCTGTGCTAGAAGAGCCAGGATCATCAAATGTTTCTGGTTCAAGCTCATCAAAAGAACAGCTTATTCAACCAATCACAGGTTTGTCAGTTTAACAGGCCAATTCTTTGCTGTTTTCTTTTAATCTGTGGTTTAGTTTATTATAATGACTTACCTTACGTAGTAAAAGGATGTTTCCTTTAAGATATGTATGTAATTATTAAATTTAGAATGAGTTTAATGTTAATTAGAAGTCAATCCTTAAGTTTGGATCCCGTTAAAAAAGTAGAATTTTTAAATTGTTTTACCATTCAAATTTCTTGTTTGAAACACAAGATGAACTAAACGGTTTTAAATTTATAATTACATTGTTACCCTTAAAATAAACTTATCTAAAGAGGGGGGGAAATGTCAATGTCAACAATTGAAGCTAAAGTCAAATCACATTCAATTCCAAACAAATTTGAATGGATTTCTATTTTTAATCTACTTAGATAAATTTGTATTTTTAATATCACATTAAATACACCTAAAATATTTTACTCCTAATATACTATTACAACAACGGTCTTTTAGATTTCTTTATTAATTTCTTGAGTTATCTATCATTATTTCTAAATTTCATAACTTAACAACCCTTAGTGGAATTATACATCAAAAAAGAGTTGACATAATGATAATTAAACTCATACCACATGACTTGAAGATAAGGAGTAATAAAGGAGTTTGGTTTGTAGTAAAAATCATAAAGCGTCTTAATTGAACCACTTTGTGGGAGCTTGATTACAGAACAAAGTTATCTACAAACGGTGTCTATATTTTATTGAAAACCTTAAGATGATACATGGAGAAGGGTCTATTTGGTAGTTAGAGAATACACATGATCAGTGTGAAGAAATTTTCCATTATTTTCGTAATGTGTCAAGTGTGTTCTATTTCCTTATCTGGTACATTTGTTCCACTTGCTAGTATGATTATATATCTTGAGGAAAAATACCTAATTTGGTGTTATGGTATAAATGTTTAAATGTTTCTATACACTCTTTGAGTGAATGTCTGAATATGCTTATTTGGTCATACTTAAATGGTCATCAACATTGCTTCTTAATTACATTGGGTATATTATTATCTTTACTGGAATGCAATAGTCTTGTATATCATTTACTCAAATTTCTTAGCAATGAGAATCAGCAATAAAAAATGAATGATGAATCCTCTAACTACTCTATGTACTGGATATTTGGTTTGCATGACTAGTAAAGCTACCAGTTATGTACCCTGGGAATTTGTGCTCACTGTGTTTTTGTGACATCAACTATATTAATTCAAGGAATCCAATTTTCATGGATAACCCATTATCCTTGCTATCATGCAGTACACGATGATTAAATGACAAGAAAGGAACTGAACTTAAAGATGTTTATGGTTGAACTTTAGTTTTATTGTGAGTATACTAAATTAACATAGCCATTTTCAGGCTAGCTAGTTTGGGAAAACATCTTGTGTTTACATTTTTTGTTTTGATCATGATTACAAAAGTGCCACATTGTTTTCACTACTTTATTTCAAAGTTTTGAATTGGAATTGGAAATGATGAAAATACGACAATGCTAAGATTTGTGTTGAAATCAGAAATTATGAAAATAACACAATGCTTTCCAGGATAAATATTTGAAAGCAAAAAATAAAGTGAAAAGATGGTGATATTTGTGTAATTATTAGTGAAAACAGGAAATGGAAATAGAAAACATTTTCTTGAATCTGAACAACTTTGTTAGGGTAGCATTTTTTTATGCATGAATTGTCTGTTACATCCTTTACCTGTATTTAGCAGGACCTCCCATTAAACGCAGAAAGCGACACAGAAGAAAGAATTTGCACAACCAAGAACCATGCTTAATGAGAGGTGTATACTTCAAAAATATGAAGTGGCAAGCCGCTATCAAGGTGGACAAGAAACAGATCCATCTAGGGACTGTTGGATCACAAGAAGAAGCTGCTCATTTATATGATAGGTAGTATCTTGAATTGTACAAACTATTACCATCACTAATTCCTTTCAATGCTTCATAGTGAGAATATGCAAGCTTTTCAGTTGTAATTGATAACCTGACAGTATACCTAGTTGGTTCTGTTCCAATTGTTAGAGCATGTGTTTTTCACTCTCTACTCCTTATTCCTCCCCTTTTCCATATCCTAACATGTTTTTTTTTCCCACTTCATAATCATAGTAGTTACCATAATCTGTAGCTGAAAGAGAAAGCAGAGCTACTTTGAATCTAAGCACATTATTTTGTTCAGAGTGTTAGGTTTGAGATAAGAACAGTCTCTGGACAAAACCTATTTTTCATTAACTTTTCTACTATCTGGTAAAGTGCATTATGCATGCAGGCAAGCTACCATAAACCATTGTTAATTCTCAAACAAAGTAGTTAGTATTTGAATGATTGCATGAAAAGGAGGAAGATTCAACACTGTAATGGTAAAGTTTTCATGATCTCTTTATTATTTATCTGTAGGGCTGCTTTCATGTGTGGGAGAGAGCCCAATTTTGAGCTTCCCGAGGAGGAGAAGCGCGAACTTAGTAAATTTAAATGGGATGATTTCTTGGCAATGACTCGACAAGCCATCACTCGCAAAAGTAATCTCTCTTCAGAACCATTTCTTGTTCTAGATTTGTTTTTCCTCAAATTTTAACAGTTGCATAATTTTTTTTTGTAGAACACAAGAGAAGGCTTAGTCCTGGACCAGGTAATAGTCATGATATGCTTCCACTGCCCAAAGATGATTGGGACAGTAAGCAAGGAGTGAGCGAAGATGCAGAATAG