Gene Details:

Gene ID Chr. No. Start Position End Position Function View on
Vu_19407 LG5 5909837 5912984 PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11300
Map

Annotations  
category   relationship type   keyword
Biological Process   involved in   protein phosphorylation, protein phosphorylation, recognition of pollen, protein phosphorylation, protein phosphorylation, immune response, protein phosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation, protein phosphorylation, recognition of pollen, recognition of pollen, protein phosphorylation, recognition of pollen, protein phosphorylation, protein phosphorylation
Cellular Component   is active in   plasma membrane
Cellular Component   located in   plasma membrane, plasma membrane, extracellular region, extracellular region, plasma membrane, extracellular region, extracellular region
Molecular Function   enables   protein kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein serine/threonine kinase activity, calmodulin binding, protein serine/threonine kinase activity, protein serine/threonine kinase activity, protein kinase activity, protein kinase activity, protein serine/threonine kinase activity
SNP Position Effect Amino acid change
T/A 5909909 synonymous_variant p.Ser670Ser
G/T 5909958 missense_variant p.Pro654His
T/C 5910013 missense_variant p.Arg636Gly
G/A 5910176 upstream_gene_variant
A/T 5910190 upstream_gene_variant
T/G 5910194 upstream_gene_variant
G/T 5910240 missense_variant p.Ser584Arg
A/C 5910773 upstream_gene_variant
T/A 5911049 upstream_gene_variant
G/C 5911062 upstream_gene_variant
T/A 5911063 upstream_gene_variant
C/A 5911071 upstream_gene_variant
G/T 5911135 upstream_gene_variant
T/C 5911167 upstream_gene_variant
A/T 5911275 upstream_gene_variant
T/A 5911428 intron_variant
T/A 5911607 missense_variant p.Glu430Val
C/A 5911659 intron_variant
C/T 5912060 missense_variant p.Glu309Lys
C/A 5912585 stop_gained p.Glu134*
A/T 5912745 missense_variant p.Asn80Lys
T/C 5912752 missense_variant p.Asn78Ser

View accession wise SNPs


Sequence Details:

Protein Sequence:
>Vu_19407.1
MGFNSHANLFFVLFMLCFYVLDVVATDTITPSESIKDPETIISKDGNFTLGFFIPPNSTNTYVGIWWKSQSTVVWVANRNQPLNDSSGVVTFSEDGNLVVLNGDQVLWSSTIVSNTSSSIYARLSDEGKLEITENTAGNSLWDSFQQPSDTLLPQMKISSNRTGRGIRLTSWTNPSNPSAGNFSLGVVERGKIVEVFIWNETQPYWRSGPWSVGVFTGVEHMASAYLNSFSVVDGEVSYNPSASEFGIYVLNSQGQFEEKYWDDEKKELQLTWTSKQSDCDVYGVCGSFAICDAHSQGTNGSAICSCLEGFEPNNKEEWDAQNWTSGCFRSTPLQCERVKDENTTTDTNVDQFLELQMVKVPDFSEWSSAEPETCRSQCLENCSCVAYSHDDGIGCMFWNDNLLDIQQLSSRGLNLYVRVDSSELEHDEGKKTTIIITITVIIGIVIIVTSACVIWRRTSCRPDPSKSKLLDWRKRCGIIEGIARGLLYLHRDSRLKIIHRDLKTSNILLDEELNPKISDFGMARIFGGTEDHANTNRIVGTYGYMSPEYAMQGLFSEKSDVFSFGVLLLEIVSGRRNSSFYADEHSLTLLGYTWAQWKEGNILSLIDSEIYDPNDHEDMLRLIHIGLLCVQELASDRPTMATVVSMLNSDVVFLPPPSQPAFIRVQNVVNSELSEKSQRVCSVNIISITEIRGR*


CDS Sequence:
>Vu_19407.1
ATGGGTTTCAACAGCCATGCAAACTTGTTCTTTGTTTTATTCATGCTGTGTTTTTATGTGTTGGACGTTGTTGCCACAGACACCATCACACCATCAGAATCCATCAAGGACCCAGAAACTATAATCTCCAAAGATGGTAATTTCACTTTGGGGTTCTTCATTCCTCCAAACTCCACAAACACTTACGTTGGAATTTGGTGGAAGTCTCAATCTACAGTCGTATGGGTTGCTAACAGAAATCAACCACTGAATGATTCGTCAGGAGTTGTTACCTTTTCTGAAGACGGCAATCTTGTGGTGCTGAATGGAGATCAAGTTCTTTGGTCGTCAACAATTGTGTCAAACACATCCTCCAGTATATATGCCCGGCTTTCAGACGAGGGGAAGCTTGAAATCACAGAAAACACAGCGGGGAACAGCTTATGGGATAGTTTTCAACAACCTTCAGATACATTACTGCCCCAAATGAAAATTTCAAGCAATAGAACAGGTAGGGGAATAAGACTTACATCATGGACGAACCCTTCTAATCCCTCTGCTGGGAACTTCTCTTTGGGTGTTGTTGAACGCGGAAAAATCGTTGAAGTGTTCATTTGGAATGAAACTCAACCATACTGGCGCAGTGGTCCTTGGAGCGTTGGGGTCTTTACAGGGGTAGAGCACATGGCTAGTGCATATCTAAATAGCTTTTCTGTTGTAGACGGTGAAGTCTCTTATAACCCAAGTGCATCTGAATTTGGAATCTACGTTCTGAATTCTCAAGGTCAGTTTGAAGAAAAATATTGGGATGATGAGAAGAAAGAACTACAACTTACTTGGACGAGTAAACAATCGGATTGTGATGTTTATGGTGTATGCGGGTCGTTTGCAATTTGTGATGCACATAGCCAAGGAACAAATGGCTCAGCAATATGCAGCTGTTTGGAAGGGTTTGAGCCAAACAACAAAGAGGAATGGGATGCACAAAACTGGACTAGTGGATGTTTCAGGAGCACACCCTTGCAGTGTGAAAGAGTTAAAGATGAAAACACAACTACAGATACAAATGTAGATCAATTTTTGGAACTGCAAATGGTGAAAGTTCCAGATTTTTCTGAATGGTCTAGTGCTGAGCCAGAGACATGCAGAAGCCAATGCTTGGAAAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGTATGTTTTGGAATGACAATCTACTAGACATCCAACAACTCTCAAGTCGAGGACTTAATCTATATGTTCGTGTAGACTCTTCTGAACTTGAACATGATGAAGGGAAAAAGACAACAATTATCATTACAATAACAGTGATAATAGGTATTGTGATCATTGTCACTTCTGCATGTGTAATATGGAGGAGGACATCCTGTCGCCCAGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAGCGCTGTGGCATAATAGAAGGAATAGCTCGAGGGTTGCTTTATCTTCATAGAGACTCTAGACTAAAAATTATACACAGAGATTTGAAGACAAGTAATATCTTGTTAGATGAAGAGCTAAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAACAGAAGATCACGCTAATACTAATAGGATTGTTGGGACATATGGCTACATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCGGATGTCTTTAGCTTTGGTGTTTTGCTGCTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGCTGATGAGCATTCTCTTACCCTTTTAGGATATACCTGGGCACAGTGGAAAGAAGGCAATATATTATCTTTAATAGATTCAGAAATATATGATCCTAATGATCATGAAGATATGTTAAGGCTCATTCACATAGGACTTTTATGTGTACAAGAACTTGCTTCAGACAGACCCACAATGGCTACAGTAGTTTCTATGCTTAATAGTGATGTTGTCTTTCTTCCTCCTCCAAGTCAACCTGCATTCATCCGGGTGCAAAACGTGGTTAATTCAGAGTTGTCTGAAAAAAGTCAAAGAGTTTGTTCCGTGAATATTATTAGTATTACAGAAATCCGTGGTAGGTAG


Promoter Sequence:
>Vu_19407::LG5:5912984-5914984(-)
AATCAAACCAACAAACATACGCACAGGATGTCAAAACTACTACTAAAAACAACTGACATGGAGGTATGGAAAGAATCTAATTCAAAGTAGAGGAAATAGAACGAAAGTGGTTGAAAGAGTCAATGTTATCAAGGGATAGATTGGAATTTGTGAGATTCAAAATAAGGACACCGATTTGATGTAAAGTGTGGTTGGAGGAGTATATGGAGATATATAAAGATCAATAAAGATAGAAGGTGTTAAAAATAGATGCACAATAGAAGAAAAATGGTCAATATCGAAAGATTTAGAACACTCTTTTAGTTTAATATTTTTTCTTTTTAATTAAGTTTTAAAATAATAATAAAAATTTATTGAGATTTCAAATAAAATAAGAATAAAATTTATTTTAATTATGTAATTTTGTGTTAATTATAGATTTTAGGAAGCTAAAAATTAAAGTTATAATAAACTTTGCAAACTATAGATAATAGGAGTGACTATCTTTTAGAAAAGACATACTAGTCAATGAATCATAATACATTGTCACACCATTACTAGTAGAAACATTTAGATTCTTAACCATAGAATATCAATGCACAACACAAAACATTATTATTATTTGGCTCAGGTTGTGACTAAGCAACATACTGATCCCACAAACTCAACCATAGGCTCCACCACGGGCTCAACTGCGAACTCCACACTAGCTTCACAACAAGCTCAACAGTAGTCTCTATAGACTTTAAAACCGAACCTATAGAATCCTTATTCCCATCTTGGACACCAACCACCTTAAGATGATGAAGTTGTTGTATTTTTGCTCCCCACCAAAAATTACATTAGCATCTTATTGTAACTATTTACATTGACCAATCATTTTACAATTTAAACAAAAAAAAGACAATTTATCATACTCCACATCAACAATAAAAAAAAATCTTGATTTTCACTAAGATTTGATTAGGCAAATCAGATAACAATTCAACGTTAGCAAGACACGAACAAAGAAACTTCAAAACGTGTTCTTTGTGTAATCATCTAAAGATAAGGGCTTGACAATGTCACATGCAATTGAAAAAATTGCCTCTCACCCACCATTGGATTTTAGTGAGCTTTACAGAAGTCAGAACAAAATCTTTAGTCCAAACAAAAATACGAAGGATTCCAGAAGACAAATTTCAAACTTTAGCCAAAACCCTTCTTATATCATCCAGCAAAGAAAAAAAAATCATAGAACCCTTTATTATGAGGAATTGCTTTCCATTAATCCAGATGTTAGCCAGTCAAGTTTCTTACAAAAAAACTAAATGCATGAGAGGTTTATTACCTTTTATTAACAAAATTCACCAATGCAAATGATATTTGCACTCTTCCAAACTGGTCAGATAAACTTCTTCAACAATTTACCTCAAGATCATATGTTCCTTAATACAAGGAGAAGACAACTGTGATAAAAAAAATATCACATGCACCTATCCCTCGAACTGCCATGCTCTAGATTTTGGCAAGTACACCATCCACAACACTCAAACCAACAGCCTTGTACACATGAAGCACAGCCTGATTGGAAATTATATTAACACGCTCAAGAAACAAAAAGGAATATCCCCGGAAAAGAAGTATCAATATAGTTTCAGCTATAAAAGCCAGGAAGTTTGACAAAGATATTTAAACATTTAATTTAATTTTTTTATGTTATTTCTCTTTTCTTGTTTTTCTGTATTTTCGTCTTTCAACCCCGGGTCAAATAGACTACTAATCTACAACAACCATTTACGATATTTTAGTATGAATAAATGAGGAAAAATCTGTTAGCAGCCTTTGAATCTAAACACGTTTCTGTATCCATCTAGAGAATTGGTTGAAAAATTGTAACAGAAAGACTAATATTAGTTTGACAAGTGTCAATTAACTTTCGTGGAAGGAAACAACACTGTTTACTTTAACAGAGAAGAGTCAAACGTTAAAAGGAGGACTGAGTTCATATAATGTGTAGATCTTATTCTGTAATCGGAATA


Gene Sequence:
>Vu_19407(-)
ATGGGTTTCAACAGCCATGCAAACTTGTTCTTTGTTTTATTCATGCTGTGTTTTTATGTGTTGGACGTTGTTGCCACAGACACCATCACACCATCAGAATCCATCAAGGACCCAGAAACTATAATCTCCAAAGATGGTAATTTCACTTTGGGGTTCTTCATTCCTCCAAACTCCACAAACACTTACGTTGGAATTTGGTGGAAGTCTCAATCTACAGTCGTATGGGTTGCTAACAGAAATCAACCACTGAATGATTCGTCAGGAGTTGTTACCTTTTCTGAAGACGGCAATCTTGTGGTGCTGAATGGAGATCAAGTTCTTTGGTCGTCAACAATTGTGTCAAACACATCCTCCAGTATATATGCCCGGCTTTCAGACGAGGGGAAGCTTGAAATCACAGAAAACACAGCGGGGAACAGCTTATGGGATAGTTTTCAACAACCTTCAGATACATTACTGCCCCAAATGAAAATTTCAAGCAATAGAACAGGTAGGGGAATAAGACTTACATCATGGACGAACCCTTCTAATCCCTCTGCTGGGAACTTCTCTTTGGGTGTTGTTGAACGCGGAAAAATCGTTGAAGTGTTCATTTGGAATGAAACTCAACCATACTGGCGCAGTGGTCCTTGGAGCGTTGGGGTCTTTACAGGGGTAGAGCACATGGCTAGTGCATATCTAAATAGCTTTTCTGTTGTAGACGGTGAAGTCTCTTATAACCCAAGTGCATCTGAATTTGGAATCTACGTTCTGAATTCTCAAGGTCAGTTTGAAGAAAAATATTGGGATGATGAGAAGAAAGAACTACAACTTACTTGGACGAGTAAACAATCGGATTGTGATGTTTATGGTGTATGCGGGTCGTTTGCAATTTGTGATGCACATAGCCAAGGAACAAATGGCTCAGCAATATGCAGCTGTTTGGAAGGGTTTGAGCCAAACAACAAAGAGGAATGGGATGCACAAAACTGGACTAGTGGATGTTTCAGGAGCACACCCTTGCAGTGTGAAAGAGTTAAAGATGAAAACACAACTACAGATACAAATGTAGATCAATTTTTGGAACTGCAAATGGTGAAAGTTCCAGATTTTTCTGAATGGTCTAGTGCTGAGCCAGAGACATGCAGAAGCCAATGCTTGGAAAATTGCTCTTGTGTTGCGTATTCTCACGATGATGGGATTGGTTGTATGTTTTGGAATGACAATCTACTAGACATCCAACAACTCTCAAGTCGAGGACTTAATCTATATGTTCGTGTAGACTCTTCTGAACTTGAACATGGTATGCTACGTCTGCTCAAGCATTTTTAAACATAGTTTCTTTTGTACGGAATTCCCTATATTTTAGATTAATATTTTTTCTTAACAGATGAAGGGAAAAAGACAACAATTATCATTACAATAACAGTGATAATAGGTATTGTGATCATTGTCACTTCTGCATGTGTAATATGGAGGAGGACATCCTGTCGCCCAGGTAAGACACCATCTTCAGAATTTAGCCAATTATTCAGTTTGGTTTCTATTGGTAAAGGAGATAAGCATACATTTTCTTTATAACTCTAGCTAAAATATGGTACTCAATCAAATCAGCAATGAATAGGGGCAAGAAAGGTTTTTTATGTTTCAAGAACGATGAATCATTAGAACAAACAGGCAACAAAGTATTTGAAGAACTGTCACGAGTTAAACTACAGGAGCTGCTCCTGTTTGATTTCGAAAAGCTTGCGACTGCCACAAACAACTTCCACCAGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCTGTCTACAAGGTACCTTGAAACAAAGTTATCATATTTGAATCCATTAATTGTTTATAGTTGCCCTCATAGATTTTTTTTTTTTTTTTCAGGGGAAACTGCCAAATGGACAAGAAATAGCAGTTAAAAGACTTTCTACAGCCTCTGGACAAGGTCAAGAAGAATTCATGAATGAAGTGGTGGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAGACTTTTTGGCTGTTGCATTGAAGGTGACGAAAAGATGTTGATCTATGAATACTTGCCAAATAAAAGCTTGGATGTATTAATCTTTGGTTAGTTTTTTATCCCTTCTTTAGTATTTTTCTCATAATCAATTCCATATTAATTGTTTCTGTTTATTTAGGATACAATTGTTTAAGATGTAAACATTCATTGCATAAATAGGGAGTTTTATTTTCAAGCATGTTAATCCAGGGCCTTTACATGACTCAGATTCATAACTTCCACTTCTAATATTGTGTTCTTAACAGTATAATTCTACCATTATATTTTAGATCCATCAAAAAGTAAACTCCTAGATTGGAGGAAGCGCTGTGGCATAATAGAAGGAATAGCTCGAGGGTTGCTTTATCTTCATAGAGACTCTAGACTAAAAATTATACACAGAGATTTGAAGACAAGTAATATCTTGTTAGATGAAGAGCTAAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGAACAGAAGATCACGCTAATACTAATAGGATTGTTGGGACATAGTAAGTATATTTTCTTTATCCATTATCTGAAGAAAATTATTGGAGAATAACGGTTGAAATTTGAACGCAGTGGCTACATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCGGATGTCTTTAGCTTTGGTGTTTTGCTGCTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGCTGATGAGCATTCTCTTACCCTTTTAGGATATGTAAGTCAACAATTTCTAACTCAATTTTAGGAATCTTTGCCGAAAGCTAATTGTTTTTGTTTTCATTTCAGACCTGGGCACAGTGGAAAGAAGGCAATATATTATCTTTAATAGATTCAGAAATATATGATCCTAATGATCATGAAGATATGTTAAGGCTCATTCACATAGGACTTTTATGTGTACAAGAACTTGCTTCAGACAGACCCACAATGGCTACAGTAGTTTCTATGCTTAATAGTGATGTTGTCTTTCTTCCTCCTCCAAGTCAACCTGCATTCATCCGGGTGCAAAACGTGGTTAATTCAGAGTTGTCTGAAAAAAGTCAAAGAGTTTGTTCCGTGAATATTATTAGTATTACAGAAATCCGTGGTAGGTAG